RNA–Protein interactions for RNA: ENST00000403994.7

TPM1-207, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TPM1, Length 1,049 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-207ENST00000403994 HIST1H2BOP23527 126 aa8.73□□□□□ -1.01
TPM1-207ENST00000403994 HIST1H2BBP33778 126 aa8.73□□□□□ -1.01
TPM1-207ENST00000403994 HIST1H2BDP58876 126 aa8.73□□□□□ -1.01
TPM1-207ENST00000403994 HIST1H2BCP62807 126 aa8.73□□□□□ -1.01
TPM1-207ENST00000403994 MOBPQ13875 183 aa8.73□□□□□ -1.01
TPM1-207ENST00000403994 HIST2H2BEQ16778 126 aa8.73□□□□□ -1.01
TPM1-207ENST00000403994 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.73□□□□□ -1.01
TPM1-207ENST00000403994 FP248Q71RG6 208 aaPredicted RBP8.73□□□□□ -1.01
TPM1-207ENST00000403994 HIST1H2BHQ93079 126 aa8.73□□□□□ -1.01
TPM1-207ENST00000403994 HIST1H2BNQ99877 126 aa8.73□□□□□ -1.01
TPM1-207ENST00000403994 HIST1H2BMQ99879 126 aa8.73□□□□□ -1.01
TPM1-207ENST00000403994 IGLV9-49A0A0B4J1Y8 123 aa8.72□□□□□ -1.01
TPM1-207ENST00000403994 LITAFQ99732 161 aa8.71□□□□□ -1.02
TPM1-207ENST00000403994 ZNF73O43830 326 aaPredicted RBP8.7□□□□□ -1.02
TPM1-207ENST00000403994 SPINK1P00995 79 aa8.7□□□□□ -1.02
TPM1-207ENST00000403994 LINC01545Q5VT33 79 aa8.7□□□□□ -1.02
TPM1-207ENST00000403994 JOSD1Q15040 202 aaPredicted RBP8.68□□□□□ -1.02
TPM1-207ENST00000403994 TIMM17BO60830 172 aa8.67□□□□□ -1.02
TPM1-207ENST00000403994 KRTAP13-3Q3SY46 172 aa8.67□□□□□ -1.02
TPM1-207ENST00000403994 LINC00308Q8TCZ7 52 aa8.67□□□□□ -1.02
TPM1-207ENST00000403994 SPANXCQ9NY87 97 aa8.67□□□□□ -1.02
TPM1-207ENST00000403994 RPS29P62273 56 aaKnown RBP8.66□□□□□ -1.02
TPM1-207ENST00000403994 PET117Q6UWS5 81 aa8.66□□□□□ -1.02
TPM1-207ENST00000403994 ZNF815PA8K554 130 aa8.65□□□□□ -1.02
TPM1-207ENST00000403994 SSBP3-AS1Q7Z2R9 100 aa8.65□□□□□ -1.02
TPM1-207ENST00000403994 Q8N377 158 aa8.65□□□□□ -1.02
TPM1-207ENST00000403994 ST20-AS1Q8NBB2 130 aa8.65□□□□□ -1.02
TPM1-207ENST00000403994 TTTY13Q9BZ97 58 aa8.65□□□□□ -1.02
TPM1-207ENST00000403994 LCE2AQ5TA79 106 aaPredicted RBP8.64□□□□□ -1.03
TPM1-207ENST00000403994 C9orf153Q5TBE3 101 aa8.64□□□□□ -1.03
TPM1-207ENST00000403994 CBY1Q9Y3M2 126 aa8.64□□□□□ -1.03
TPM1-207ENST00000403994 C3orf79P0CE67 100 aa8.63□□□□□ -1.03
TPM1-207ENST00000403994 OR13C6PQ8NH95 151 aa8.62□□□□□ -1.03
TPM1-207ENST00000403994 COA6Q5JTJ3 125 aaKnown RBP8.61□□□□□ -1.03
TPM1-207ENST00000403994 SPANXDQ9BXN6 97 aa8.61□□□□□ -1.03
TPM1-207ENST00000403994 C5orf52A6NGY3 159 aa8.6□□□□□ -1.03
TPM1-207ENST00000403994 HINT1P49773 126 aaPredicted RBP8.6□□□□□ -1.03
TPM1-207ENST00000403994 SLC25A20O43772 301 aa8.59□□□□□ -1.03
TPM1-207ENST00000403994 KRTDAPP60985 99 aa8.59□□□□□ -1.03
TPM1-207ENST00000403994 ASB16-AS1Q495Z4 193 aa8.58□□□□□ -1.04
TPM1-207ENST00000403994 DHRS4-AS1Q9P1J3 65 aa8.58□□□□□ -1.04
TPM1-207ENST00000403994 SPRR1BP22528 89 aa8.57□□□□□ -1.04
TPM1-207ENST00000403994 ELOF1P60002 83 aaKnown RBP8.57□□□□□ -1.04
TPM1-207ENST00000403994 C20orf202A1L168 122 aa8.55□□□□□ -1.04
TPM1-207ENST00000403994 COX7BP24311 80 aa8.55□□□□□ -1.04
TPM1-207ENST00000403994 C6orf99Q4VX62 202 aa8.55□□□□□ -1.04
TPM1-207ENST00000403994 ANKRD39Q53RE8 183 aa8.55□□□□□ -1.04
TPM1-207ENST00000403994 SCGB1D4Q6XE38 83 aa8.55□□□□□ -1.04
TPM1-207ENST00000403994 LINC00518Q8N0U6 118 aa8.55□□□□□ -1.04
TPM1-207ENST00000403994 SLC25A34Q6PIV7 304 aa8.54□□□□□ -1.04
TPM1-207ENST00000403994 ATOH7Q8N100 152 aa8.53□□□□□ -1.04
TPM1-207ENST00000403994 SEC61BP60468 96 aaKnown RBP8.51□□□□□ -1.05
TPM1-207ENST00000403994 COPS9Q8WXC6 57 aa8.51□□□□□ -1.05
TPM1-207ENST00000403994 KRTAP4-1Q9BYQ7 146 aa8.51□□□□□ -1.05
TPM1-207ENST00000403994 LAMTOR3Q9UHA4 124 aa8.51□□□□□ -1.05
TPM1-207ENST00000403994 TRBV7-6A0A0J9YX20 115 aa8.5□□□□□ -1.05
TPM1-207ENST00000403994 IFITM1P13164 125 aa8.5□□□□□ -1.05
TPM1-207ENST00000403994 XP32Q5T750 250 aa8.5□□□□□ -1.05
TPM1-207ENST00000403994 PCP2Q8IVA1 136 aa8.5□□□□□ -1.05
TPM1-207ENST00000403994 LIMD2Q9BT23 127 aa8.5□□□□□ -1.05
TPM1-207ENST00000403994 KRTAP9-2Q9BYQ4 174 aa8.5□□□□□ -1.05
TPM1-207ENST00000403994 HRCT1Q6UXD1 115 aa8.49□□□□□ -1.05
TPM1-207ENST00000403994 Q1RN00 199 aa8.48□□□□□ -1.05
TPM1-207ENST00000403994 Q6ZVH6 145 aa8.48□□□□□ -1.05
TPM1-207ENST00000403994 A0A1B0GWB2 263 aa8.47□□□□□ -1.05
TPM1-207ENST00000403994 DEFB105AQ8NG35 78 aa8.47□□□□□ -1.05
TPM1-207ENST00000403994 TEX49A0A1B0GTD5 131 aa8.46□□□□□ -1.06
TPM1-207ENST00000403994 A6NDN8 102 aa8.46□□□□□ -1.06
TPM1-207ENST00000403994 AKR1D1P51857 326 aa8.46□□□□□ -1.06
TPM1-207ENST00000403994 TAL2Q16559 108 aa8.46□□□□□ -1.06
TPM1-207ENST00000403994 MUSTN1Q8IVN3 82 aa8.46□□□□□ -1.06
TPM1-207ENST00000403994 IGLV5-48A0A075B6I7 105 aa8.44□□□□□ -1.06
TPM1-207ENST00000403994 LINC01547P58512 204 aaPredicted RBP8.44□□□□□ -1.06
TPM1-207ENST00000403994 CD164Q04900 197 aa8.43□□□□□ -1.06
TPM1-207ENST00000403994 SMIM29Q86T20 159 aa8.43□□□□□ -1.06
TPM1-207ENST00000403994 PRO1933Q9H354 126 aa8.43□□□□□ -1.06
TPM1-207ENST00000403994 TRAV13-2A0A0B4J235 113 aa8.41□□□□□ -1.06
TPM1-207ENST00000403994 SNRPEP62304 92 aaKnown RBP8.41□□□□□ -1.06
TPM1-207ENST00000403994 HIST3H2BBQ8N257 126 aa8.41□□□□□ -1.06
TPM1-207ENST00000403994 SMIM11BQ8TCY0 68 aa8.41□□□□□ -1.06
TPM1-207ENST00000403994 A4D1N5 150 aa8.4□□□□□ -1.06
TPM1-207ENST00000403994 H7C2G1 150 aa8.4□□□□□ -1.06
TPM1-207ENST00000403994 HIST1H2BLQ99880 126 aa8.4□□□□□ -1.06
TPM1-207ENST00000403994 C9orf92A6NGG3 77 aa8.39□□□□□ -1.07
TPM1-207ENST00000403994 A0A0G2JQZ4 141 aa8.38□□□□□ -1.07
TPM1-207ENST00000403994 NHP2Q9NX24 153 aaKnown RBP8.38□□□□□ -1.07
TPM1-207ENST00000403994 S100A2P29034 98 aa8.37□□□□□ -1.07
TPM1-207ENST00000403994 Q5XG85 94 aa8.37□□□□□ -1.07
TPM1-207ENST00000403994 HSBP1L1C9JCN9 74 aa8.34□□□□□ -1.07
TPM1-207ENST00000403994 PCOTHQ58A44 107 aa8.34□□□□□ -1.07
TPM1-207ENST00000403994 C1orf195Q5TG92 126 aa8.34□□□□□ -1.07
TPM1-207ENST00000403994 LINC00575Q6W349 94 aa8.32□□□□□ -1.08
TPM1-207ENST00000403994 F8WEM9 126 aa8.3□□□□□ -1.08
TPM1-207ENST00000403994 VAMP3Q15836 100 aa8.3□□□□□ -1.08
TPM1-207ENST00000403994 KRTAP19-2Q3LHN2 52 aa8.3□□□□□ -1.08
TPM1-207ENST00000403994 LCE2CQ5TA81 110 aa8.3□□□□□ -1.08
TPM1-207ENST00000403994 Q6ZQY7 126 aa8.3□□□□□ -1.08
TPM1-207ENST00000403994 IGLV8-61A0A075B6I0 122 aa8.29□□□□□ -1.08
TPM1-207ENST00000403994 S100A6P06703 90 aa8.28□□□□□ -1.08
TPM1-207ENST00000403994 C12orf57Q99622 126 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms