RNA–Protein interactions for RNA: ENST00000401874.6

TSC2-204, Transcript of TSC complex subunit 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TSC2, Length 5,421 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-204ENST00000401874 ATP11AUNQ6ZP68 121 aa10.97□□□□□ -0.65
TSC2-204ENST00000401874 TYMSOSQ8TAI1 123 aa10.97□□□□□ -0.65
TSC2-204ENST00000401874 A8MUN3 132 aa10.97□□□□□ -0.65
TSC2-204ENST00000401874 CHD8Q9HCK8 2581 aa10.96□□□□□ -0.66
TSC2-204ENST00000401874 MTORP42345 2549 aa10.95□□□□□ -0.66
TSC2-204ENST00000401874 OBSCN-AS1Q96MR7 158 aa10.95□□□□□ -0.66
TSC2-204ENST00000401874 KRTAP10-11P60412 298 aa10.94□□□□□ -0.66
TSC2-204ENST00000401874 C8orf17Q9NRJ1 99 aa10.94□□□□□ -0.66
TSC2-204ENST00000401874 KRTAP10-3P60369 221 aa10.93□□□□□ -0.66
TSC2-204ENST00000401874 SPTBN4Q9H254 2564 aa10.92□□□□□ -0.66
TSC2-204ENST00000401874 POLQO75417 2590 aa10.91□□□□□ -0.66
TSC2-204ENST00000401874 Q96NJ1 140 aa10.9□□□□□ -0.66
TSC2-204ENST00000401874 A0A1B0GVX0 72 aa10.88□□□□□ -0.67
TSC2-204ENST00000401874 K7EIL1 84 aa10.85□□□□□ -0.67
TSC2-204ENST00000401874 A0A1W2PNM2 257 aa10.85□□□□□ -0.67
TSC2-204ENST00000401874 CD164Q04900 197 aa10.84□□□□□ -0.67
TSC2-204ENST00000401874 ZNF861PO60384 105 aa10.84□□□□□ -0.67
TSC2-204ENST00000401874 SSBP3-AS1Q7Z2R9 100 aa10.84□□□□□ -0.67
TSC2-204ENST00000401874 LINC00336Q6ZUF6 198 aa10.84□□□□□ -0.67
TSC2-204ENST00000401874 C9orf163Q8N9P6 203 aa10.83□□□□□ -0.68
TSC2-204ENST00000401874 IGLV8-61A0A075B6I0 122 aa10.82□□□□□ -0.68
TSC2-204ENST00000401874 IGLV5-48A0A075B6I7 105 aa10.82□□□□□ -0.68
TSC2-204ENST00000401874 FAM104AQ969W3 186 aa10.82□□□□□ -0.68
TSC2-204ENST00000401874 CHD7Q9P2D1 2997 aa10.82□□□□□ -0.68
TSC2-204ENST00000401874 UQCR11O14957 56 aa10.82□□□□□ -0.68
TSC2-204ENST00000401874 IGLV5-37A0A075B6J1 123 aa10.81□□□□□ -0.68
TSC2-204ENST00000401874 A0A0G2JQZ4 141 aa10.81□□□□□ -0.68
TSC2-204ENST00000401874 A0A1W2PNN7 141 aa10.81□□□□□ -0.68
TSC2-204ENST00000401874 DSCR10P59022 87 aa10.8□□□□□ -0.68
TSC2-204ENST00000401874 KRTAP1-3Q8IUG1 177 aa10.8□□□□□ -0.68
TSC2-204ENST00000401874 CHD9Q3L8U1 2897 aa10.8□□□□□ -0.68
TSC2-204ENST00000401874 SPANXA2-OT1Q8N9U9 137 aa10.79□□□□□ -0.68
TSC2-204ENST00000401874 PLA2G1BP04054 148 aaKnown RBP10.79□□□□□ -0.68
TSC2-204ENST00000401874 CNBPP62633 177 aaKnown RBP10.79□□□□□ -0.68
TSC2-204ENST00000401874 ACANP16112 2415 aa10.79□□□□□ -0.68
TSC2-204ENST00000401874 A0A087WTM6 91 aa10.75□□□□□ -0.69
TSC2-204ENST00000401874 WWC2-AS2Q96NR7 200 aa10.75□□□□□ -0.69
TSC2-204ENST00000401874 CASC10Q5T4H9 136 aa10.74□□□□□ -0.69
TSC2-204ENST00000401874 SPRR4Q96PI1 79 aa10.73□□□□□ -0.69
TSC2-204ENST00000401874 KRTAP1-1Q07627 177 aa10.72□□□□□ -0.69
TSC2-204ENST00000401874 OCR1Q9BZK8 76 aa10.72□□□□□ -0.69
TSC2-204ENST00000401874 TRANK1O15050 2925 aa10.72□□□□□ -0.69
TSC2-204ENST00000401874 MIR22HGQ0VDD5 57 aa10.71□□□□□ -0.69
TSC2-204ENST00000401874 MKI67P46013 3256 aaKnown RBP10.69□□□□□ -0.7
TSC2-204ENST00000401874 C5orf42Q9H799 3197 aa10.69□□□□□ -0.7
TSC2-204ENST00000401874 IGLV7-43P04211 117 aa10.68□□□□□ -0.7
TSC2-204ENST00000401874 SPINT4Q6UDR6 99 aa10.68□□□□□ -0.7
TSC2-204ENST00000401874 LINC00304Q8N9R0 145 aa10.67□□□□□ -0.7
TSC2-204ENST00000401874 APLNQ9ULZ1 77 aa10.67□□□□□ -0.7
TSC2-204ENST00000401874 PSORS1C2Q9UIG4 136 aa10.67□□□□□ -0.7
TSC2-204ENST00000401874 KTN1-AS1Q86SY8 53 aa10.66□□□□□ -0.7
TSC2-204ENST00000401874 ANAPC11Q9NYG5 84 aa10.64□□□□□ -0.71
TSC2-204ENST00000401874 WIPF1O43516 503 aa10.62□□□□□ -0.71
TSC2-204ENST00000401874 LCA10Q71F78 164 aa10.62□□□□□ -0.71
TSC2-204ENST00000401874 Q1T7F1 81 aa10.61□□□□□ -0.71
TSC2-204ENST00000401874 CDC42SE1Q9NRR8 79 aa10.59□□□□□ -0.71
TSC2-204ENST00000401874 LAMA2P24043 3122 aaKnown RBP10.57□□□□□ -0.72
TSC2-204ENST00000401874 PRRC2CQ9Y520 2896 aaKnown RBP10.56□□□□□ -0.72
TSC2-204ENST00000401874 FASNP49327 2511 aaKnown RBP10.55□□□□□ -0.72
TSC2-204ENST00000401874 F8P00451 2351 aa10.54□□□□□ -0.72
TSC2-204ENST00000401874 C9orf92A6NGG3 77 aa10.53□□□□□ -0.72
TSC2-204ENST00000401874 IGLV7-46A0A075B6I9 117 aa10.5□□□□□ -0.73
TSC2-204ENST00000401874 Q8NDZ9 215 aa10.5□□□□□ -0.73
TSC2-204ENST00000401874 CDH23Q9H251 3354 aa10.5□□□□□ -0.73
TSC2-204ENST00000401874 SPRR1AP35321 89 aa10.47□□□□□ -0.73
TSC2-204ENST00000401874 CRIPTQ9P021 101 aa10.47□□□□□ -0.73
TSC2-204ENST00000401874 LAMA3Q16787 3333 aa10.46□□□□□ -0.73
TSC2-204ENST00000401874 EPG5Q9HCE0 2579 aa10.45□□□□□ -0.74
TSC2-204ENST00000401874 Q5XG85 94 aa10.44□□□□□ -0.74
TSC2-204ENST00000401874 PRR26Q8N8Z3 221 aa10.42□□□□□ -0.74
TSC2-204ENST00000401874 Q8N1X5 172 aa10.42□□□□□ -0.74
TSC2-204ENST00000401874 CYSTM1Q9H1C7 97 aa10.42□□□□□ -0.74
TSC2-204ENST00000401874 Q75L30 129 aa10.41□□□□□ -0.74
TSC2-204ENST00000401874 RANBP2P49792 3224 aaKnown RBP10.4□□□□□ -0.74
TSC2-204ENST00000401874 MMP24-AS1A0A0U1RRL7 71 aa10.4□□□□□ -0.74
TSC2-204ENST00000401874 SMR3BP02814 79 aaPredicted RBP10.39□□□□□ -0.75
TSC2-204ENST00000401874 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.38□□□□□ -0.75
TSC2-204ENST00000401874 CR1P17927 2039 aa10.38□□□□□ -0.75
TSC2-204ENST00000401874 REV3LO60673 3130 aa10.37□□□□□ -0.75
TSC2-204ENST00000401874 FAM229BQ4G0N7 80 aa10.36□□□□□ -0.75
TSC2-204ENST00000401874 FP248Q71RG6 208 aaPredicted RBP10.36□□□□□ -0.75
TSC2-204ENST00000401874 HRES1P13985 223 aa10.35□□□□□ -0.75
TSC2-204ENST00000401874 SPRR1BP22528 89 aa10.35□□□□□ -0.75
TSC2-204ENST00000401874 LINC01558Q9Y6Z2 57 aa10.34□□□□□ -0.75
TSC2-204ENST00000401874 SPTBN5Q9NRC6 3674 aaKnown RBP10.34□□□□□ -0.75
TSC2-204ENST00000401874 UNC80Q8N2C7 3258 aa10.34□□□□□ -0.75
TSC2-204ENST00000401874 XIRP2A4UGR9 3374 aa10.34□□□□□ -0.75
TSC2-204ENST00000401874 Q8N9P0 234 aaPredicted RBP10.33□□□□□ -0.76
TSC2-204ENST00000401874 J3QL48 77 aa10.31□□□□□ -0.76
TSC2-204ENST00000401874 TNP2Q05952 138 aa10.31□□□□□ -0.76
TSC2-204ENST00000401874 RBM12B-AS1Q9P1G2 102 aa10.3□□□□□ -0.76
TSC2-204ENST00000401874 SZT2Q5T011 3432 aa10.3□□□□□ -0.76
TSC2-204ENST00000401874 LINC00472Q9H8W2 130 aa10.3□□□□□ -0.76
TSC2-204ENST00000401874 PLAC8Q9NZF1 115 aa10.3□□□□□ -0.76
TSC2-204ENST00000401874 COX6B2Q6YFQ2 88 aa10.28□□□□□ -0.76
TSC2-204ENST00000401874 FLNAP21333 2647 aaKnown RBP10.28□□□□□ -0.76
TSC2-204ENST00000401874 KRTAP26-1Q6PEX3 210 aa10.28□□□□□ -0.76
TSC2-204ENST00000401874 DNAH14Q0VDD8 3507 aa10.27□□□□□ -0.76
TSC2-204ENST00000401874 HECTD1Q9ULT8 2610 aa10.27□□□□□ -0.77
TSC2-204ENST00000401874 A0A0D9SG42 100 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 98.7 ms