RNA–Protein interactions for RNA: ENST00000399804.5

SCAF4-202, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF4, Length 4,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-202ENST00000399804 IMUPQ9GZP8 106 aa9.31□□□□□ -0.92
SCAF4-202ENST00000399804 LINC00846Q9NV44 126 aa9.31□□□□□ -0.92
SCAF4-202ENST00000399804 VPS13CQ709C8 3753 aa9.31□□□□□ -0.92
SCAF4-202ENST00000399804 CSMD2Q7Z408 3487 aa9.3□□□□□ -0.92
SCAF4-202ENST00000399804 SMCR5Q8TEV8 140 aa9.3□□□□□ -0.92
SCAF4-202ENST00000399804 IGLV5-52A0A0A0MRZ9 124 aa9.29□□□□□ -0.92
SCAF4-202ENST00000399804 IGLV6-57P01721 117 aa9.29□□□□□ -0.92
SCAF4-202ENST00000399804 C1orf137Q5JT78 98 aa9.29□□□□□ -0.92
SCAF4-202ENST00000399804 NDUFB1O75438 58 aa9.28□□□□□ -0.92
SCAF4-202ENST00000399804 A0A087WVE0 104 aa9.28□□□□□ -0.92
SCAF4-202ENST00000399804 CASC10Q5T4H9 136 aa9.27□□□□□ -0.93
SCAF4-202ENST00000399804 PDZD2O15018 2839 aa9.27□□□□□ -0.93
SCAF4-202ENST00000399804 FAM168BA1KXE4 195 aa9.27□□□□□ -0.93
SCAF4-202ENST00000399804 ELOF1P60002 83 aaKnown RBP9.27□□□□□ -0.93
SCAF4-202ENST00000399804 Q6JHZ5 121 aa9.27□□□□□ -0.93
SCAF4-202ENST00000399804 C3orf22Q8N5N4 141 aa9.27□□□□□ -0.93
SCAF4-202ENST00000399804 H0Y9J4 135 aa9.26□□□□□ -0.93
SCAF4-202ENST00000399804 SERTAD4-AS1Q5TG53 156 aa9.26□□□□□ -0.93
SCAF4-202ENST00000399804 TRBV7-7A0A0K0K1E9 115 aa9.25□□□□□ -0.93
SCAF4-202ENST00000399804 CHTF8P0CG12 524 aa9.25□□□□□ -0.93
SCAF4-202ENST00000399804 STAB2Q8WWQ8 2551 aa9.25□□□□□ -0.93
SCAF4-202ENST00000399804 UQCRQO14949 82 aa9.25□□□□□ -0.93
SCAF4-202ENST00000399804 IGLV9-49A0A0B4J1Y8 123 aa9.24□□□□□ -0.93
SCAF4-202ENST00000399804 NDUFS5O43920 106 aa9.24□□□□□ -0.93
SCAF4-202ENST00000399804 OTOGQ6ZRI0 2925 aa9.23□□□□□ -0.93
SCAF4-202ENST00000399804 TRBV7-6A0A0J9YX20 115 aa9.22□□□□□ -0.93
SCAF4-202ENST00000399804 C16orf90A8MZG2 172 aa9.22□□□□□ -0.93
SCAF4-202ENST00000399804 PHF5AQ7RTV0 110 aaKnown RBP9.21□□□□□ -0.93
SCAF4-202ENST00000399804 C9orf129Q5T035 196 aaKnown RBP9.21□□□□□ -0.93
SCAF4-202ENST00000399804 HRCT1Q6UXD1 115 aa9.21□□□□□ -0.93
SCAF4-202ENST00000399804 C20orf197Q8N268 126 aa9.21□□□□□ -0.94
SCAF4-202ENST00000399804 Q6ZRX8 168 aa9.2□□□□□ -0.94
SCAF4-202ENST00000399804 Q9BRP9 147 aa9.2□□□□□ -0.94
SCAF4-202ENST00000399804 APLNQ9ULZ1 77 aa9.2□□□□□ -0.94
SCAF4-202ENST00000399804 TENM1Q9UKZ4 2725 aa9.2□□□□□ -0.94
SCAF4-202ENST00000399804 C4orf48Q5BLP8 95 aa9.2□□□□□ -0.94
SCAF4-202ENST00000399804 Q6ZVQ6 151 aa9.2□□□□□ -0.94
SCAF4-202ENST00000399804 COX7CP15954 63 aa9.19□□□□□ -0.94
SCAF4-202ENST00000399804 ZNF706Q9Y5V0 76 aaPredicted RBP9.19□□□□□ -0.94
SCAF4-202ENST00000399804 ST20-AS1Q8NBB2 130 aa9.17□□□□□ -0.94
SCAF4-202ENST00000399804 NBPF19A0A087WUL8 3843 aa9.17□□□□□ -0.94
SCAF4-202ENST00000399804 KCNQ1DNQ9H478 68 aa9.16□□□□□ -0.94
SCAF4-202ENST00000399804 LINC00528Q8N1L1 170 aa9.15□□□□□ -0.94
SCAF4-202ENST00000399804 SERP2Q8N6R1 65 aa9.15□□□□□ -0.94
SCAF4-202ENST00000399804 A0A087WSZ3 146 aa9.15□□□□□ -0.94
SCAF4-202ENST00000399804 J3KT08 172 aa9.15□□□□□ -0.94
SCAF4-202ENST00000399804 IGLV1-50A0A075B6I6 118 aa9.14□□□□□ -0.95
SCAF4-202ENST00000399804 RTL8CO15255 209 aa9.14□□□□□ -0.95
SCAF4-202ENST00000399804 WWC2-AS2Q96NR7 200 aa9.14□□□□□ -0.95
SCAF4-202ENST00000399804 MP68P56378 58 aa9.14□□□□□ -0.95
SCAF4-202ENST00000399804 SPINK6Q6UWN8 80 aa9.14□□□□□ -0.95
SCAF4-202ENST00000399804 Q6ZQT0 140 aa9.14□□□□□ -0.95
SCAF4-202ENST00000399804 LINC01547P58512 204 aaPredicted RBP9.13□□□□□ -0.95
SCAF4-202ENST00000399804 WFDC13Q8IUB5 93 aa9.13□□□□□ -0.95
SCAF4-202ENST00000399804 LINC01600Q96MT4 127 aa9.13□□□□□ -0.95
SCAF4-202ENST00000399804 TLX1NBP0CAT3 122 aa9.13□□□□□ -0.95
SCAF4-202ENST00000399804 VWFP04275 2813 aa9.12□□□□□ -0.95
SCAF4-202ENST00000399804 DEFB116Q30KQ4 102 aa9.11□□□□□ -0.95
SCAF4-202ENST00000399804 EPM2AB3EWF7 344 aa9.1□□□□□ -0.95
SCAF4-202ENST00000399804 Q8N9L7 120 aa9.1□□□□□ -0.95
SCAF4-202ENST00000399804 C9orf163Q8N9P6 203 aa9.1□□□□□ -0.95
SCAF4-202ENST00000399804 Q8NDZ9 215 aa9.09□□□□□ -0.95
SCAF4-202ENST00000399804 LOC110117498A0A087WWA1 95 aa9.08□□□□□ -0.96
SCAF4-202ENST00000399804 A0A1W2PNN7 141 aa9.07□□□□□ -0.96
SCAF4-202ENST00000399804 SNURFQ9Y675 71 aa9.07□□□□□ -0.96
SCAF4-202ENST00000399804 A0A087WTM6 91 aa9.06□□□□□ -0.96
SCAF4-202ENST00000399804 CIRBP-AS1Q8TBR5 109 aa9.06□□□□□ -0.96
SCAF4-202ENST00000399804 CYSTM1Q9H1C7 97 aa9.05□□□□□ -0.96
SCAF4-202ENST00000399804 PLA2G2DQ9UNK4 145 aa9.05□□□□□ -0.96
SCAF4-202ENST00000399804 LINC00476Q8WZB0 136 aa9.05□□□□□ -0.96
SCAF4-202ENST00000399804 CNBPP62633 177 aaKnown RBP9.04□□□□□ -0.96
SCAF4-202ENST00000399804 KRTAP26-1Q6PEX3 210 aa9.04□□□□□ -0.96
SCAF4-202ENST00000399804 Q8NBF4 154 aa9.04□□□□□ -0.96
SCAF4-202ENST00000399804 Q8N377 158 aa9.03□□□□□ -0.96
SCAF4-202ENST00000399804 CXCL6P80162 114 aa9.03□□□□□ -0.96
SCAF4-202ENST00000399804 CRYGAP11844 174 aa9.03□□□□□ -0.96
SCAF4-202ENST00000399804 FAM30AQ9NZY2 134 aa9.03□□□□□ -0.96
SCAF4-202ENST00000399804 BCE1O60756 84 aa9.02□□□□□ -0.97
SCAF4-202ENST00000399804 FBN1P35555 2871 aaKnown RBP9.01□□□□□ -0.97
SCAF4-202ENST00000399804 TENM3Q9P273 2699 aa9.01□□□□□ -0.97
SCAF4-202ENST00000399804 TRAV7A0A075B6U4 112 aa9.01□□□□□ -0.97
SCAF4-202ENST00000399804 KRTAP1-5Q9BYS1 174 aa9.01□□□□□ -0.97
SCAF4-202ENST00000399804 ERC2-IT1O76042 136 aa9□□□□□ -0.97
SCAF4-202ENST00000399804 IGKV4-1P06312 121 aa9□□□□□ -0.97
SCAF4-202ENST00000399804 TMEM258P61165 79 aa8.99□□□□□ -0.97
SCAF4-202ENST00000399804 MOBPQ13875 183 aa8.98□□□□□ -0.97
SCAF4-202ENST00000399804 C5orf47Q569G3 176 aa8.97□□□□□ -0.97
SCAF4-202ENST00000399804 TRBV7-4A0A0J9YYF1 115 aa8.96□□□□□ -0.98
SCAF4-202ENST00000399804 A0A0G2JQZ4 141 aa8.95□□□□□ -0.98
SCAF4-202ENST00000399804 IGLV5-37A0A075B6J1 123 aa8.95□□□□□ -0.98
SCAF4-202ENST00000399804 FAM236DA0A1B0GTK5 79 aa8.95□□□□□ -0.98
SCAF4-202ENST00000399804 FAM236CP0DP71 79 aa8.95□□□□□ -0.98
SCAF4-202ENST00000399804 C4orf26Q17RF5 130 aa8.95□□□□□ -0.98
SCAF4-202ENST00000399804 A0A1B0GW54 56 aa8.94□□□□□ -0.98
SCAF4-202ENST00000399804 IGHV6-1A0A0B4J1U7 121 aa8.94□□□□□ -0.98
SCAF4-202ENST00000399804 CASC2Q6XLA1 102 aa8.93□□□□□ -0.98
SCAF4-202ENST00000399804 OBSCN-AS1Q96MR7 158 aa8.92□□□□□ -0.98
SCAF4-202ENST00000399804 HCG22E2RYF7 251 aa8.9□□□□□ -0.98
SCAF4-202ENST00000399804 PRR4Q16378 134 aa8.9□□□□□ -0.98
SCAF4-202ENST00000399804 IGFL1Q6UW32 110 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms