RNA–Protein interactions for RNA: ENST00000399256.4

APOB-202, Transcript of apolipoprotein B, humanhuman

TSL 1 (best) BASIC

Gene APOB, Length 3,128 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-202ENST00000399256 ATP5EP56381 51 aaPredicted RBP9.24□□□□□ -0.93
APOB-202ENST00000399256 FAM229BQ4G0N7 80 aa9.24□□□□□ -0.93
APOB-202ENST00000399256 DEFB105AQ8NG35 78 aa9.24□□□□□ -0.93
APOB-202ENST00000399256 APOC4P55056 127 aa9.23□□□□□ -0.93
APOB-202ENST00000399256 TEP1Q99973 2627 aaKnown RBP9.23□□□□□ -0.93
APOB-202ENST00000399256 PRYO14603 147 aa9.22□□□□□ -0.93
APOB-202ENST00000399256 WFDC10BQ8IUB3 73 aa9.22□□□□□ -0.93
APOB-202ENST00000399256 C1orf43Q9BWL3 253 aa9.22□□□□□ -0.93
APOB-202ENST00000399256 OCR1Q9BZK8 76 aa9.22□□□□□ -0.93
APOB-202ENST00000399256 MPLKIPQ8TAP9 179 aa9.21□□□□□ -0.93
APOB-202ENST00000399256 EGFEM1PQ0D2K5 195 aa9.21□□□□□ -0.94
APOB-202ENST00000399256 A0A0U1RQV1 116 aa9.2□□□□□ -0.94
APOB-202ENST00000399256 ERC2-IT1O76042 136 aa9.2□□□□□ -0.94
APOB-202ENST00000399256 HIGD2AQ9BW72 106 aa9.2□□□□□ -0.94
APOB-202ENST00000399256 TENM1Q9UKZ4 2725 aa9.18□□□□□ -0.94
APOB-202ENST00000399256 Q6ZRP5 223 aa9.18□□□□□ -0.94
APOB-202ENST00000399256 C15orf56Q8N910 161 aa9.18□□□□□ -0.94
APOB-202ENST00000399256 PKIGQ9Y2B9 76 aa9.18□□□□□ -0.94
APOB-202ENST00000399256 FUSP35637 526 aaKnown RBP eCLIP9.18□□□□□ -0.94
APOB-202ENST00000399256 BRK1Q8WUW1 75 aa9.18□□□□□ -0.94
APOB-202ENST00000399256 MAST4O15021 2626 aa9.17□□□□□ -0.94
APOB-202ENST00000399256 KRTAP26-1Q6PEX3 210 aa9.17□□□□□ -0.94
APOB-202ENST00000399256 FAM30AQ9NZY2 134 aa9.17□□□□□ -0.94
APOB-202ENST00000399256 Q8N377 158 aa9.16□□□□□ -0.94
APOB-202ENST00000399256 ATRQ13535 2644 aa9.15□□□□□ -0.94
APOB-202ENST00000399256 SMIM29Q86T20 159 aa9.15□□□□□ -0.94
APOB-202ENST00000399256 KRTAP24-1Q3LI83 254 aa9.15□□□□□ -0.95
APOB-202ENST00000399256 KPRPQ5T749 579 aaPredicted RBP9.14□□□□□ -0.95
APOB-202ENST00000399256 Q6ZTC4 211 aa9.14□□□□□ -0.95
APOB-202ENST00000399256 SERTAD4-AS1Q5TG53 156 aa9.13□□□□□ -0.95
APOB-202ENST00000399256 NKAPP1Q8N9T2 125 aa9.13□□□□□ -0.95
APOB-202ENST00000399256 ESRGQ1W209 222 aa9.12□□□□□ -0.95
APOB-202ENST00000399256 C7orf33Q8WU49 177 aa9.12□□□□□ -0.95
APOB-202ENST00000399256 FBN1P35555 2871 aaKnown RBP9.11□□□□□ -0.95
APOB-202ENST00000399256 IGKV2D-24A0A075B6R9 120 aa9.1□□□□□ -0.95
APOB-202ENST00000399256 KCNQ1DNQ9H478 68 aa9.1□□□□□ -0.95
APOB-202ENST00000399256 IGLV5-48A0A075B6I7 105 aa9.1□□□□□ -0.95
APOB-202ENST00000399256 A0A1W2PNM2 257 aa9.1□□□□□ -0.95
APOB-202ENST00000399256 RPL37AP8A6NKH3 93 aa9.1□□□□□ -0.95
APOB-202ENST00000399256 SYCNQ0VAF6 134 aa9.09□□□□□ -0.95
APOB-202ENST00000399256 TRRAPQ9Y4A5 3859 aa9.09□□□□□ -0.95
APOB-202ENST00000399256 RETNQ9HD89 108 aa9.08□□□□□ -0.96
APOB-202ENST00000399256 LRCOL1A6NCL2 159 aa9.08□□□□□ -0.96
APOB-202ENST00000399256 ST20-AS1Q8NBB2 130 aa9.07□□□□□ -0.96
APOB-202ENST00000399256 C1orf137Q5JT78 98 aa9.07□□□□□ -0.96
APOB-202ENST00000399256 Q9BRP9 147 aa9.07□□□□□ -0.96
APOB-202ENST00000399256 PKD1L1Q8TDX9 2849 aa9.06□□□□□ -0.96
APOB-202ENST00000399256 FAM168BA1KXE4 195 aa9.05□□□□□ -0.96
APOB-202ENST00000399256 Q6ZRX8 168 aa9.05□□□□□ -0.96
APOB-202ENST00000399256 DHRS4-AS1Q9P1J3 65 aa9.04□□□□□ -0.96
APOB-202ENST00000399256 K7EQZ3 153 aa9.03□□□□□ -0.96
APOB-202ENST00000399256 Q8NBF4 154 aa9.03□□□□□ -0.96
APOB-202ENST00000399256 ETDCA0A1B0GVM5 59 aa9.02□□□□□ -0.96
APOB-202ENST00000399256 hDV103S1A0JD37 113 aa9.02□□□□□ -0.96
APOB-202ENST00000399256 DSCR10P59022 87 aa9.02□□□□□ -0.96
APOB-202ENST00000399256 TNP2Q05952 138 aa9.02□□□□□ -0.97
APOB-202ENST00000399256 CMYA5Q8N3K9 4069 aa9.02□□□□□ -0.97
APOB-202ENST00000399256 STAB1Q9NY15 2570 aa9.01□□□□□ -0.97
APOB-202ENST00000399256 LCE6AA0A183 80 aa9.01□□□□□ -0.97
APOB-202ENST00000399256 KRTAP4-16G5E9R7 235 aaPredicted RBP9□□□□□ -0.97
APOB-202ENST00000399256 PRR4Q16378 134 aa9□□□□□ -0.97
APOB-202ENST00000399256 C1orf64Q8NEQ6 169 aa9□□□□□ -0.97
APOB-202ENST00000399256 C1orf195Q5TG92 126 aa9□□□□□ -0.97
APOB-202ENST00000399256 A0A0G2JQZ4 141 aa8.99□□□□□ -0.97
APOB-202ENST00000399256 A0A1W2PNN7 141 aa8.99□□□□□ -0.97
APOB-202ENST00000399256 H3BNG1 76 aa8.99□□□□□ -0.97
APOB-202ENST00000399256 IGLV1-50A0A075B6I6 118 aa8.99□□□□□ -0.97
APOB-202ENST00000399256 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.98□□□□□ -0.97
APOB-202ENST00000399256 A0A1B0GW54 56 aa8.98□□□□□ -0.97
APOB-202ENST00000399256 LINC01556Q5JQF7 62 aa8.98□□□□□ -0.97
APOB-202ENST00000399256 ZCCHC13Q8WW36 166 aaKnown RBP8.98□□□□□ -0.97
APOB-202ENST00000399256 SPRR4Q96PI1 79 aa8.98□□□□□ -0.97
APOB-202ENST00000399256 COL6A5A8TX70 2615 aa8.97□□□□□ -0.97
APOB-202ENST00000399256 F8WDY8 70 aa8.97□□□□□ -0.97
APOB-202ENST00000399256 ANK2Q01484 3957 aa8.97□□□□□ -0.97
APOB-202ENST00000399256 UBE2BP63146 152 aa8.97□□□□□ -0.97
APOB-202ENST00000399256 PRB2P02812 416 aaPredicted RBP8.96□□□□□ -0.97
APOB-202ENST00000399256 DEFB116Q30KQ4 102 aa8.96□□□□□ -0.97
APOB-202ENST00000399256 KRTAP7-1Q8IUC3 87 aa8.96□□□□□ -0.98
APOB-202ENST00000399256 SPRR1AP35321 89 aa8.95□□□□□ -0.98
APOB-202ENST00000399256 CASC10Q5T4H9 136 aa8.95□□□□□ -0.98
APOB-202ENST00000399256 HCG22E2RYF7 251 aa8.94□□□□□ -0.98
APOB-202ENST00000399256 PLA2G2DQ9UNK4 145 aa8.94□□□□□ -0.98
APOB-202ENST00000399256 TLX1NBP0CAT3 122 aa8.94□□□□□ -0.98
APOB-202ENST00000399256 PSCAO43653 123 aa8.93□□□□□ -0.98
APOB-202ENST00000399256 PSPHP1O15172 72 aa8.93□□□□□ -0.98
APOB-202ENST00000399256 LINC00476Q8WZB0 136 aa8.93□□□□□ -0.98
APOB-202ENST00000399256 DEFB131BA0A096LNP1 70 aa8.92□□□□□ -0.98
APOB-202ENST00000399256 WFDC13Q8IUB5 93 aa8.92□□□□□ -0.98
APOB-202ENST00000399256 TENM3Q9P273 2699 aa8.92□□□□□ -0.98
APOB-202ENST00000399256 OXLD1Q5BKU9 147 aa8.91□□□□□ -0.98
APOB-202ENST00000399256 MRPL55Q7Z7F7 128 aaKnown RBP8.91□□□□□ -0.98
APOB-202ENST00000399256 IGLV5-37A0A075B6J1 123 aa8.91□□□□□ -0.98
APOB-202ENST00000399256 Q1T7F1 81 aa8.91□□□□□ -0.98
APOB-202ENST00000399256 DNAH3Q8TD57 4116 aa8.9□□□□□ -0.99
APOB-202ENST00000399256 V9GYY9 64 aa8.89□□□□□ -0.99
APOB-202ENST00000399256 KRTAP10-11P60412 298 aa8.88□□□□□ -0.99
APOB-202ENST00000399256 DNAH10OSP0CZ25 163 aa8.88□□□□□ -0.99
APOB-202ENST00000399256 IGFL1Q6UW32 110 aa8.88□□□□□ -0.99
APOB-202ENST00000399256 TRAV22A0A0B4J277 110 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 124 ms