RNA–Protein interactions for RNA: ENST00000397611.7

PTPRD-205, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,242 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-205ENST00000397611 KPRPQ5T749 579 aaPredicted RBP3.73□□□□□ -1.81
PTPRD-205ENST00000397611 NBEAL2Q6ZNJ1 2754 aa3.72□□□□□ -1.81
PTPRD-205ENST00000397611 H7BZZ5 65 aa3.72□□□□□ -1.81
PTPRD-205ENST00000397611 LELP1Q5T871 98 aa3.72□□□□□ -1.81
PTPRD-205ENST00000397611 LIMD2Q9BT23 127 aa3.72□□□□□ -1.81
PTPRD-205ENST00000397611 NBEAL1Q6ZS30 2694 aa3.72□□□□□ -1.81
PTPRD-205ENST00000397611 DCHS2Q6V1P9 2916 aa3.72□□□□□ -1.81
PTPRD-205ENST00000397611 X6R8D5 127 aa3.72□□□□□ -1.81
PTPRD-205ENST00000397611 SPTBN5Q9NRC6 3674 aaKnown RBP3.72□□□□□ -1.81
PTPRD-205ENST00000397611 A0A087WSZ3 146 aa3.72□□□□□ -1.81
PTPRD-205ENST00000397611 EGFEM1PQ0D2K5 195 aa3.71□□□□□ -1.81
PTPRD-205ENST00000397611 COL6A5A8TX70 2615 aa3.71□□□□□ -1.82
PTPRD-205ENST00000397611 Q5XG85 94 aa3.71□□□□□ -1.82
PTPRD-205ENST00000397611 hDV103S1A0JD37 113 aa3.71□□□□□ -1.82
PTPRD-205ENST00000397611 SERTAD4-AS1Q5TG53 156 aa3.71□□□□□ -1.82
PTPRD-205ENST00000397611 SPINK6Q6UWN8 80 aa3.71□□□□□ -1.82
PTPRD-205ENST00000397611 C1orf64Q8NEQ6 169 aa3.71□□□□□ -1.82
PTPRD-205ENST00000397611 IGLV9-49A0A0B4J1Y8 123 aa3.7□□□□□ -1.82
PTPRD-205ENST00000397611 KRTAP1-1Q07627 177 aa3.7□□□□□ -1.82
PTPRD-205ENST00000397611 ERC2-IT1O76042 136 aa3.7□□□□□ -1.82
PTPRD-205ENST00000397611 IGLV6-57P01721 117 aa3.7□□□□□ -1.82
PTPRD-205ENST00000397611 KLKP1Q107X0 134 aa3.7□□□□□ -1.82
PTPRD-205ENST00000397611 CYSTM1Q9H1C7 97 aa3.7□□□□□ -1.82
PTPRD-205ENST00000397611 ASH1LQ9NR48 2969 aaKnown RBP3.7□□□□□ -1.82
PTPRD-205ENST00000397611 IGHV6-1A0A0B4J1U7 121 aa3.69□□□□□ -1.82
PTPRD-205ENST00000397611 KRTAP10-9P60411 292 aa3.69□□□□□ -1.82
PTPRD-205ENST00000397611 CD164Q04900 197 aa3.69□□□□□ -1.82
PTPRD-205ENST00000397611 SPAG11AQ6PDA7 123 aa3.69□□□□□ -1.82
PTPRD-205ENST00000397611 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.69□□□□□ -1.82
PTPRD-205ENST00000397611 TRBV7-4A0A0J9YYF1 115 aa3.69□□□□□ -1.82
PTPRD-205ENST00000397611 C11orf45Q8TAV5 145 aa3.69□□□□□ -1.82
PTPRD-205ENST00000397611 COL6A3P12111 3177 aa3.69□□□□□ -1.82
PTPRD-205ENST00000397611 RETNLBQ9BQ08 111 aa3.68□□□□□ -1.82
PTPRD-205ENST00000397611 EYSQ5T1H1 3165 aa3.68□□□□□ -1.82
PTPRD-205ENST00000397611 SPEGQ15772 3267 aa3.68□□□□□ -1.82
PTPRD-205ENST00000397611 ELOF1P60002 83 aaKnown RBP3.68□□□□□ -1.82
PTPRD-205ENST00000397611 TRAV22A0A0B4J277 110 aa3.68□□□□□ -1.82
PTPRD-205ENST00000397611 REG3GQ6UW15 175 aa3.68□□□□□ -1.82
PTPRD-205ENST00000397611 Q6ZRU5 148 aa3.68□□□□□ -1.82
PTPRD-205ENST00000397611 DEFB131BA0A096LNP1 70 aa3.67□□□□□ -1.82
PTPRD-205ENST00000397611 Q9BRP9 147 aa3.67□□□□□ -1.82
PTPRD-205ENST00000397611 NUPR2A6NF83 97 aa3.67□□□□□ -1.82
PTPRD-205ENST00000397611 K7ERS5 55 aa3.67□□□□□ -1.82
PTPRD-205ENST00000397611 C4orf48Q5BLP8 95 aa3.66□□□□□ -1.82
PTPRD-205ENST00000397611 HIVEP1P15822 2718 aa3.66□□□□□ -1.82
PTPRD-205ENST00000397611 FBN2P35556 2912 aa3.66□□□□□ -1.82
PTPRD-205ENST00000397611 M0R2N4 97 aa3.66□□□□□ -1.82
PTPRD-205ENST00000397611 C6orf48Q9UBA6 75 aa3.66□□□□□ -1.82
PTPRD-205ENST00000397611 C7orf33Q8WU49 177 aa3.65□□□□□ -1.82
PTPRD-205ENST00000397611 EPM2AB3EWF7 344 aa3.65□□□□□ -1.83
PTPRD-205ENST00000397611 Q8NAQ8 132 aa3.65□□□□□ -1.83
PTPRD-205ENST00000397611 RPL37AP61513 92 aaKnown RBP3.65□□□□□ -1.83
PTPRD-205ENST00000397611 KTN1-AS1Q86SY8 53 aa3.65□□□□□ -1.83
PTPRD-205ENST00000397611 LINC00528Q8N1L1 170 aa3.65□□□□□ -1.83
PTPRD-205ENST00000397611 SPINK1P00995 79 aa3.64□□□□□ -1.83
PTPRD-205ENST00000397611 OXTP01178 125 aa3.64□□□□□ -1.83
PTPRD-205ENST00000397611 ST20-AS1Q8NBB2 130 aa3.64□□□□□ -1.83
PTPRD-205ENST00000397611 CR1P17927 2039 aa3.64□□□□□ -1.83
PTPRD-205ENST00000397611 K7EQZ3 153 aa3.64□□□□□ -1.83
PTPRD-205ENST00000397611 PRLHP81277 87 aa3.64□□□□□ -1.83
PTPRD-205ENST00000397611 PRR15Q8IV56 129 aa3.64□□□□□ -1.83
PTPRD-205ENST00000397611 COA5Q86WW8 74 aa3.63□□□□□ -1.83
PTPRD-205ENST00000397611 PLA2G2DQ9UNK4 145 aa3.63□□□□□ -1.83
PTPRD-205ENST00000397611 IGLV5-48A0A075B6I7 105 aa3.63□□□□□ -1.83
PTPRD-205ENST00000397611 VPREB1P12018 145 aa3.63□□□□□ -1.83
PTPRD-205ENST00000397611 VWFP04275 2813 aa3.63□□□□□ -1.83
PTPRD-205ENST00000397611 A0A1B0GU69 56 aa3.62□□□□□ -1.83
PTPRD-205ENST00000397611 TLX1NBP0CAT3 122 aa3.62□□□□□ -1.83
PTPRD-205ENST00000397611 Q8NBF4 154 aa3.62□□□□□ -1.83
PTPRD-205ENST00000397611 MDFIQ99750 246 aa3.62□□□□□ -1.83
PTPRD-205ENST00000397611 LINC01556Q5JQF7 62 aa3.62□□□□□ -1.83
PTPRD-205ENST00000397611 FAM229BQ4G0N7 80 aa3.62□□□□□ -1.83
PTPRD-205ENST00000397611 C7orf65Q6ZTY9 151 aa3.62□□□□□ -1.83
PTPRD-205ENST00000397611 FP248Q71RG6 208 aaPredicted RBP3.62□□□□□ -1.83
PTPRD-205ENST00000397611 TENM1Q9UKZ4 2725 aa3.62□□□□□ -1.83
PTPRD-205ENST00000397611 KCNQ1DNQ9H478 68 aa3.62□□□□□ -1.83
PTPRD-205ENST00000397611 IGLV5-37A0A075B6J1 123 aa3.61□□□□□ -1.83
PTPRD-205ENST00000397611 C8orf87E5RJ46 101 aa3.61□□□□□ -1.83
PTPRD-205ENST00000397611 ZNF706Q9Y5V0 76 aaPredicted RBP3.61□□□□□ -1.83
PTPRD-205ENST00000397611 CELSR3Q9NYQ7 3312 aa3.61□□□□□ -1.83
PTPRD-205ENST00000397611 CFAP47Q6ZTR5 3102 aa3.61□□□□□ -1.83
PTPRD-205ENST00000397611 CYP4F30PQ9H0H9 118 aa3.61□□□□□ -1.83
PTPRD-205ENST00000397611 LINC00476Q8WZB0 136 aa3.61□□□□□ -1.83
PTPRD-205ENST00000397611 CELSR2Q9HCU4 2923 aa3.61□□□□□ -1.83
PTPRD-205ENST00000397611 Q6ZTC4 211 aa3.61□□□□□ -1.83
PTPRD-205ENST00000397611 ATP11AUNQ6ZP68 121 aa3.6□□□□□ -1.83
PTPRD-205ENST00000397611 H3BPC8 53 aa3.6□□□□□ -1.83
PTPRD-205ENST00000397611 SPRR1AP35321 89 aa3.6□□□□□ -1.83
PTPRD-205ENST00000397611 Q6ZRX8 168 aa3.6□□□□□ -1.83
PTPRD-205ENST00000397611 MUC3AQ02505 3323 aa3.6□□□□□ -1.83
PTPRD-205ENST00000397611 LOC101927531A0A1B0GV80 90 aa3.6□□□□□ -1.83
PTPRD-205ENST00000397611 RBM12B-AS1Q9P1G2 102 aa3.59□□□□□ -1.83
PTPRD-205ENST00000397611 KRTAP26-1Q6PEX3 210 aa3.59□□□□□ -1.83
PTPRD-205ENST00000397611 LCA10Q71F78 164 aa3.59□□□□□ -1.84
PTPRD-205ENST00000397611 USP34Q70CQ2 3546 aa3.59□□□□□ -1.84
PTPRD-205ENST00000397611 KMT2BQ9UMN6 2715 aaPredicted RBP3.58□□□□□ -1.84
PTPRD-205ENST00000397611 TENM3Q9P273 2699 aa3.58□□□□□ -1.84
PTPRD-205ENST00000397611 LY6G6CO95867 125 aa3.58□□□□□ -1.84
PTPRD-205ENST00000397611 A0A0G2JQZ4 141 aa3.58□□□□□ -1.84
PTPRD-205ENST00000397611 A0A1W2PNN7 141 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 89.6 ms