RNA–Protein interactions for RNA: ENST00000396526.7

SNX6-202, Transcript of sorting nexin 6, humanhuman

TSL 1 (best) BASIC

Gene SNX6, Length 3,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-202ENST00000396526 UBL5Q9BZL1 73 aa10.44□□□□□ -0.74
SNX6-202ENST00000396526 LINC00846Q9NV44 126 aa10.44□□□□□ -0.74
SNX6-202ENST00000396526 NBDYA0A0U1RRE5 68 aa10.43□□□□□ -0.74
SNX6-202ENST00000396526 RPL37AP8A6NKH3 93 aa10.43□□□□□ -0.74
SNX6-202ENST00000396526 IGLV1-50A0A075B6I6 118 aa10.43□□□□□ -0.74
SNX6-202ENST00000396526 LOC110117498A0A087WWA1 95 aa10.43□□□□□ -0.74
SNX6-202ENST00000396526 NDUFV3P56181 108 aaKnown RBP10.43□□□□□ -0.74
SNX6-202ENST00000396526 C16orf90A8MZG2 172 aa10.42□□□□□ -0.74
SNX6-202ENST00000396526 Q6JHZ5 121 aa10.41□□□□□ -0.74
SNX6-202ENST00000396526 FAM168BA1KXE4 195 aa10.41□□□□□ -0.74
SNX6-202ENST00000396526 Q6ZQT0 140 aa10.4□□□□□ -0.74
SNX6-202ENST00000396526 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.4□□□□□ -0.75
SNX6-202ENST00000396526 IGKV2-24A0A0C4DH68 120 aa10.4□□□□□ -0.75
SNX6-202ENST00000396526 Q6ZRX8 168 aa10.39□□□□□ -0.75
SNX6-202ENST00000396526 ATP5EP2Q5VTU8 51 aa10.38□□□□□ -0.75
SNX6-202ENST00000396526 SPRR1AP35321 89 aa10.36□□□□□ -0.75
SNX6-202ENST00000396526 UBE2BP63146 152 aa10.36□□□□□ -0.75
SNX6-202ENST00000396526 REG3GQ6UW15 175 aa10.36□□□□□ -0.75
SNX6-202ENST00000396526 DEFB105AQ8NG35 78 aa10.36□□□□□ -0.75
SNX6-202ENST00000396526 IGKV3D-7A0A0C4DH55 119 aa10.35□□□□□ -0.75
SNX6-202ENST00000396526 A0A096LNI7 61 aa10.35□□□□□ -0.75
SNX6-202ENST00000396526 B5MCH6 92 aa10.35□□□□□ -0.75
SNX6-202ENST00000396526 FAM236AA0A1B0GUQ0 79 aa10.35□□□□□ -0.75
SNX6-202ENST00000396526 FAM236BA0A1B0GV22 79 aa10.35□□□□□ -0.75
SNX6-202ENST00000396526 LINC00474Q9P2X8 69 aa10.34□□□□□ -0.75
SNX6-202ENST00000396526 TRBV7-4A0A0J9YYF1 115 aa10.32□□□□□ -0.76
SNX6-202ENST00000396526 C9orf163Q8N9P6 203 aa10.32□□□□□ -0.76
SNX6-202ENST00000396526 KRTAP4-16G5E9R7 235 aaPredicted RBP10.31□□□□□ -0.76
SNX6-202ENST00000396526 DPH3Q96FX2 82 aa10.31□□□□□ -0.76
SNX6-202ENST00000396526 KRTAP7-1Q8IUC3 87 aa10.31□□□□□ -0.76
SNX6-202ENST00000396526 HIST1H4AP62805 103 aaKnown RBP10.3□□□□□ -0.76
SNX6-202ENST00000396526 DNAH9Q9NYC9 4486 aa10.3□□□□□ -0.76
SNX6-202ENST00000396526 M0R2N4 97 aa10.3□□□□□ -0.76
SNX6-202ENST00000396526 LRCOL1A6NCL2 159 aa10.29□□□□□ -0.76
SNX6-202ENST00000396526 HAMPP81172 84 aa10.28□□□□□ -0.76
SNX6-202ENST00000396526 Q8N377 158 aa10.28□□□□□ -0.76
SNX6-202ENST00000396526 FAM19A1Q7Z5A9 133 aa10.28□□□□□ -0.76
SNX6-202ENST00000396526 Q9BRP9 147 aa10.28□□□□□ -0.76
SNX6-202ENST00000396526 A0A1W2PNN7 141 aa10.27□□□□□ -0.77
SNX6-202ENST00000396526 ATOX1O00244 68 aa10.26□□□□□ -0.77
SNX6-202ENST00000396526 F8WEM9 126 aa10.25□□□□□ -0.77
SNX6-202ENST00000396526 FUSP35637 526 aaKnown RBP eCLIP10.25□□□□□ -0.77
SNX6-202ENST00000396526 Q6ZVQ6 151 aa10.25□□□□□ -0.77
SNX6-202ENST00000396526 COL7A1Q02388 2944 aa10.25□□□□□ -0.77
SNX6-202ENST00000396526 Q6ZRN7 208 aaPredicted RBP10.24□□□□□ -0.77
SNX6-202ENST00000396526 IGLV5-48A0A075B6I7 105 aa10.23□□□□□ -0.77
SNX6-202ENST00000396526 CHTF8P0CG12 524 aa10.23□□□□□ -0.77
SNX6-202ENST00000396526 A0A1B0GW54 56 aa10.22□□□□□ -0.77
SNX6-202ENST00000396526 HIGD2AQ9BW72 106 aa10.22□□□□□ -0.77
SNX6-202ENST00000396526 ST20-AS1Q8NBB2 130 aa10.21□□□□□ -0.77
SNX6-202ENST00000396526 CXCL6P80162 114 aa10.2□□□□□ -0.78
SNX6-202ENST00000396526 NREPQ16612 68 aa10.2□□□□□ -0.78
SNX6-202ENST00000396526 LINC01547P58512 204 aaPredicted RBP10.2□□□□□ -0.78
SNX6-202ENST00000396526 PHF5AQ7RTV0 110 aaKnown RBP10.2□□□□□ -0.78
SNX6-202ENST00000396526 A0A087WTM6 91 aa10.2□□□□□ -0.78
SNX6-202ENST00000396526 ERC2-IT1O76042 136 aa10.19□□□□□ -0.78
SNX6-202ENST00000396526 C1orf137Q5JT78 98 aa10.19□□□□□ -0.78
SNX6-202ENST00000396526 UBE2AP49459 152 aa10.18□□□□□ -0.78
SNX6-202ENST00000396526 PRLHP81277 87 aa10.18□□□□□ -0.78
SNX6-202ENST00000396526 A0A087WVE0 104 aa10.18□□□□□ -0.78
SNX6-202ENST00000396526 C1orf134Q5TEV5 83 aa10.17□□□□□ -0.78
SNX6-202ENST00000396526 C3orf22Q8N5N4 141 aa10.17□□□□□ -0.78
SNX6-202ENST00000396526 KRTAP21-3Q3LHN1 58 aa10.16□□□□□ -0.78
SNX6-202ENST00000396526 H0Y9J4 135 aa10.16□□□□□ -0.78
SNX6-202ENST00000396526 CCDC179H3BU77 68 aa10.15□□□□□ -0.78
SNX6-202ENST00000396526 UQCRQO14949 82 aa10.15□□□□□ -0.78
SNX6-202ENST00000396526 Q6ZR54 194 aa10.15□□□□□ -0.78
SNX6-202ENST00000396526 LY6G6CO95867 125 aa10.14□□□□□ -0.79
SNX6-202ENST00000396526 TENM2Q9NT68 2774 aa10.14□□□□□ -0.79
SNX6-202ENST00000396526 C3orf84H3BNL1 204 aa10.13□□□□□ -0.79
SNX6-202ENST00000396526 DNAH1Q9P2D7 4330 aa10.13□□□□□ -0.79
SNX6-202ENST00000396526 EPM2AB3EWF7 344 aa10.12□□□□□ -0.79
SNX6-202ENST00000396526 RTL8CO15255 209 aa10.12□□□□□ -0.79
SNX6-202ENST00000396526 COX7CP15954 63 aa10.12□□□□□ -0.79
SNX6-202ENST00000396526 TNP2Q05952 138 aa10.12□□□□□ -0.79
SNX6-202ENST00000396526 Q8NBF4 154 aa10.12□□□□□ -0.79
SNX6-202ENST00000396526 BPY2O14599 106 aa10.11□□□□□ -0.79
SNX6-202ENST00000396526 C9orf153Q5TBE3 101 aa10.11□□□□□ -0.79
SNX6-202ENST00000396526 BCE1O60756 84 aa10.11□□□□□ -0.79
SNX6-202ENST00000396526 SERP2Q8N6R1 65 aa10.11□□□□□ -0.79
SNX6-202ENST00000396526 WWC2-AS2Q96NR7 200 aa10.11□□□□□ -0.79
SNX6-202ENST00000396526 SPACA4Q8TDM5 124 aa10.1□□□□□ -0.79
SNX6-202ENST00000396526 DYNC2H1Q8NCM8 4307 aaKnown RBP10.08□□□□□ -0.8
SNX6-202ENST00000396526 IGLV5-52A0A0A0MRZ9 124 aa10.08□□□□□ -0.8
SNX6-202ENST00000396526 SCXQ7RTU7 201 aa10.08□□□□□ -0.8
SNX6-202ENST00000396526 A0A1W2PNM2 257 aa10.08□□□□□ -0.8
SNX6-202ENST00000396526 SMIM20Q8N5G0 67 aa10.08□□□□□ -0.8
SNX6-202ENST00000396526 LINC00476Q8WZB0 136 aa10.08□□□□□ -0.8
SNX6-202ENST00000396526 SMIM29Q86T20 159 aa10.07□□□□□ -0.8
SNX6-202ENST00000396526 SPRR4Q96PI1 79 aa10.06□□□□□ -0.8
SNX6-202ENST00000396526 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.06□□□□□ -0.8
SNX6-202ENST00000396526 PANO1I0J062 215 aa10.04□□□□□ -0.8
SNX6-202ENST00000396526 CRYGAP11844 174 aa10.03□□□□□ -0.8
SNX6-202ENST00000396526 SPRR1BP22528 89 aa10.03□□□□□ -0.8
SNX6-202ENST00000396526 PLECQ15149 4684 aaKnown RBP10.03□□□□□ -0.8
SNX6-202ENST00000396526 IGLV8-61A0A075B6I0 122 aa10.03□□□□□ -0.8
SNX6-202ENST00000396526 KRTAP11-1Q8IUC1 163 aa10.03□□□□□ -0.8
SNX6-202ENST00000396526 IGFL1Q6UW32 110 aa10.01□□□□□ -0.81
SNX6-202ENST00000396526 MEGF8Q7Z7M0 2845 aa10□□□□□ -0.81
SNX6-202ENST00000396526 ZNF706Q9Y5V0 76 aaPredicted RBP10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 483.9 ms