RNA–Protein interactions for RNA: ENST00000395757.5

SREBF1-205, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SREBF1, Length 3,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-205ENST00000395757 ZNF73O43830 326 aaPredicted RBP9.68□□□□□ -0.86
SREBF1-205ENST00000395757 C3orf84H3BNL1 204 aa9.68□□□□□ -0.86
SREBF1-205ENST00000395757 H3BS24 57 aa9.68□□□□□ -0.86
SREBF1-205ENST00000395757 JMJD7-PLA2G4BH0Y9G9 81 aa9.67□□□□□ -0.86
SREBF1-205ENST00000395757 COX17Q14061 63 aa9.67□□□□□ -0.86
SREBF1-205ENST00000395757 UBE2BP63146 152 aa9.66□□□□□ -0.86
SREBF1-205ENST00000395757 LINC00575Q6W349 94 aa9.65□□□□□ -0.86
SREBF1-205ENST00000395757 CD164Q04900 197 aa9.65□□□□□ -0.86
SREBF1-205ENST00000395757 C22orf24Q9Y442 160 aa9.65□□□□□ -0.86
SREBF1-205ENST00000395757 M0R2N4 97 aa9.64□□□□□ -0.87
SREBF1-205ENST00000395757 FP248Q71RG6 208 aaPredicted RBP9.64□□□□□ -0.87
SREBF1-205ENST00000395757 CASC10Q5T4H9 136 aa9.63□□□□□ -0.87
SREBF1-205ENST00000395757 A0A096LNI7 61 aa9.63□□□□□ -0.87
SREBF1-205ENST00000395757 UPK3BQ9BT76 320 aa9.63□□□□□ -0.87
SREBF1-205ENST00000395757 LRCOL1A6NCL2 159 aa9.62□□□□□ -0.87
SREBF1-205ENST00000395757 ETDCA0A1B0GVM5 59 aa9.62□□□□□ -0.87
SREBF1-205ENST00000395757 CCKP06307 115 aa9.62□□□□□ -0.87
SREBF1-205ENST00000395757 Q8N9L7 120 aa9.62□□□□□ -0.87
SREBF1-205ENST00000395757 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.62□□□□□ -0.87
SREBF1-205ENST00000395757 FAM168BA1KXE4 195 aa9.61□□□□□ -0.87
SREBF1-205ENST00000395757 Q6ZRP5 223 aa9.61□□□□□ -0.87
SREBF1-205ENST00000395757 TRBV7-6A0A0J9YX20 115 aa9.6□□□□□ -0.87
SREBF1-205ENST00000395757 F8WEM9 126 aa9.6□□□□□ -0.87
SREBF1-205ENST00000395757 HIGD2AQ9BW72 106 aa9.59□□□□□ -0.87
SREBF1-205ENST00000395757 PRR34Q9NV39 138 aa9.58□□□□□ -0.88
SREBF1-205ENST00000395757 RMI2Q96E14 147 aa9.58□□□□□ -0.88
SREBF1-205ENST00000395757 M0R378 163 aa9.57□□□□□ -0.88
SREBF1-205ENST00000395757 EGFEM1PQ0D2K5 195 aa9.57□□□□□ -0.88
SREBF1-205ENST00000395757 C15orf56Q8N910 161 aa9.56□□□□□ -0.88
SREBF1-205ENST00000395757 TRAV10A0A0B4J240 114 aa9.56□□□□□ -0.88
SREBF1-205ENST00000395757 SPTSSBQ8NFR3 76 aa9.55□□□□□ -0.88
SREBF1-205ENST00000395757 SERTAD4-AS1Q5TG53 156 aa9.55□□□□□ -0.88
SREBF1-205ENST00000395757 LINC00588Q9Y4M8 146 aa9.55□□□□□ -0.88
SREBF1-205ENST00000395757 A0A0G2JQZ4 141 aa9.54□□□□□ -0.88
SREBF1-205ENST00000395757 A0A1W2PNN7 141 aa9.54□□□□□ -0.88
SREBF1-205ENST00000395757 NREPQ16612 68 aa9.53□□□□□ -0.88
SREBF1-205ENST00000395757 Q6JHZ5 121 aa9.53□□□□□ -0.88
SREBF1-205ENST00000395757 C7orf33Q8WU49 177 aa9.53□□□□□ -0.88
SREBF1-205ENST00000395757 VPREB1P12018 145 aa9.52□□□□□ -0.88
SREBF1-205ENST00000395757 FUSP35637 526 aaKnown RBP eCLIP9.52□□□□□ -0.89
SREBF1-205ENST00000395757 PSPHP1O15172 72 aa9.51□□□□□ -0.89
SREBF1-205ENST00000395757 Q6ZVQ6 151 aa9.51□□□□□ -0.89
SREBF1-205ENST00000395757 IGLV6-57P01721 117 aa9.51□□□□□ -0.89
SREBF1-205ENST00000395757 DEFB116Q30KQ4 102 aa9.51□□□□□ -0.89
SREBF1-205ENST00000395757 MUC7Q8TAX7 377 aa9.51□□□□□ -0.89
SREBF1-205ENST00000395757 ST20-AS1Q8NBB2 130 aa9.51□□□□□ -0.89
SREBF1-205ENST00000395757 LINC01556Q5JQF7 62 aa9.5□□□□□ -0.89
SREBF1-205ENST00000395757 RBM12B-AS1Q9P1G2 102 aa9.5□□□□□ -0.89
SREBF1-205ENST00000395757 PRLHP81277 87 aa9.49□□□□□ -0.89
SREBF1-205ENST00000395757 K7EIL1 84 aa9.48□□□□□ -0.89
SREBF1-205ENST00000395757 LINC01547P58512 204 aaPredicted RBP9.47□□□□□ -0.89
SREBF1-205ENST00000395757 Q6ZQT0 140 aa9.47□□□□□ -0.89
SREBF1-205ENST00000395757 H7BZZ5 65 aa9.47□□□□□ -0.89
SREBF1-205ENST00000395757 CHTF8P0CG12 524 aa9.47□□□□□ -0.89
SREBF1-205ENST00000395757 CSMD3Q7Z407 3707 aa9.47□□□□□ -0.89
SREBF1-205ENST00000395757 LINC00167Q96N53 147 aa9.45□□□□□ -0.9
SREBF1-205ENST00000395757 BPY2O14599 106 aa9.44□□□□□ -0.9
SREBF1-205ENST00000395757 LINC01600Q96MT4 127 aa9.44□□□□□ -0.9
SREBF1-205ENST00000395757 ELOF1P60002 83 aaKnown RBP9.44□□□□□ -0.9
SREBF1-205ENST00000395757 FAM229BQ4G0N7 80 aa9.44□□□□□ -0.9
SREBF1-205ENST00000395757 GVQW2A0A096LPI5 108 aaPredicted RBP9.4□□□□□ -0.91
SREBF1-205ENST00000395757 ERC2-IT1O76042 136 aa9.38□□□□□ -0.91
SREBF1-205ENST00000395757 C1orf137Q5JT78 98 aa9.38□□□□□ -0.91
SREBF1-205ENST00000395757 LINC00528Q8N1L1 170 aa9.38□□□□□ -0.91
SREBF1-205ENST00000395757 SRRM2Q9UQ35 2752 aaKnown RBP9.38□□□□□ -0.91
SREBF1-205ENST00000395757 H3BNG1 76 aa9.37□□□□□ -0.91
SREBF1-205ENST00000395757 OBSCN-AS1Q96MR7 158 aa9.37□□□□□ -0.91
SREBF1-205ENST00000395757 DNAH10OSP0CZ25 163 aa9.37□□□□□ -0.91
SREBF1-205ENST00000395757 PDE6GP18545 87 aa9.36□□□□□ -0.91
SREBF1-205ENST00000395757 UBE2AP49459 152 aa9.36□□□□□ -0.91
SREBF1-205ENST00000395757 MDFIQ99750 246 aa9.36□□□□□ -0.91
SREBF1-205ENST00000395757 KRTAP26-1Q6PEX3 210 aa9.36□□□□□ -0.91
SREBF1-205ENST00000395757 PRR4Q16378 134 aa9.35□□□□□ -0.91
SREBF1-205ENST00000395757 FAM30AQ9NZY2 134 aa9.35□□□□□ -0.91
SREBF1-205ENST00000395757 PRR15Q8IV56 129 aa9.35□□□□□ -0.91
SREBF1-205ENST00000395757 ATP5EP2Q5VTU8 51 aa9.34□□□□□ -0.91
SREBF1-205ENST00000395757 PHF5AQ7RTV0 110 aaKnown RBP9.34□□□□□ -0.91
SREBF1-205ENST00000395757 WFDC13Q8IUB5 93 aa9.34□□□□□ -0.91
SREBF1-205ENST00000395757 TM2D3Q9BRN9 247 aa9.34□□□□□ -0.91
SREBF1-205ENST00000395757 Q8N377 158 aa9.33□□□□□ -0.92
SREBF1-205ENST00000395757 REG3GQ6UW15 175 aa9.33□□□□□ -0.92
SREBF1-205ENST00000395757 TRAV7A0A075B6U4 112 aa9.32□□□□□ -0.92
SREBF1-205ENST00000395757 KRTAP1-5Q9BYS1 174 aa9.31□□□□□ -0.92
SREBF1-205ENST00000395757 Q6ZRX8 168 aa9.3□□□□□ -0.92
SREBF1-205ENST00000395757 TGP01266 2768 aa9.3□□□□□ -0.92
SREBF1-205ENST00000395757 DHRS4-AS1Q9P1J3 65 aa9.3□□□□□ -0.92
SREBF1-205ENST00000395757 A0A087WSZ3 146 aa9.29□□□□□ -0.92
SREBF1-205ENST00000395757 LOC110117498A0A087WWA1 95 aa9.29□□□□□ -0.92
SREBF1-205ENST00000395757 Q9BRP9 147 aa9.29□□□□□ -0.92
SREBF1-205ENST00000395757 IGLV9-49A0A0B4J1Y8 123 aa9.28□□□□□ -0.92
SREBF1-205ENST00000395757 A8MU10 97 aa9.28□□□□□ -0.92
SREBF1-205ENST00000395757 COL7A1Q02388 2944 aa9.28□□□□□ -0.92
SREBF1-205ENST00000395757 KTN1-AS1Q86SY8 53 aa9.27□□□□□ -0.93
SREBF1-205ENST00000395757 IGLV1-50A0A075B6I6 118 aa9.26□□□□□ -0.93
SREBF1-205ENST00000395757 TRBV7-4A0A0J9YYF1 115 aa9.26□□□□□ -0.93
SREBF1-205ENST00000395757 KCNQ1DNQ9H478 68 aa9.26□□□□□ -0.93
SREBF1-205ENST00000395757 H3BQ85 93 aa9.25□□□□□ -0.93
SREBF1-205ENST00000395757 C8orf87E5RJ46 101 aa9.24□□□□□ -0.93
SREBF1-205ENST00000395757 RPL37AP61513 92 aaKnown RBP9.24□□□□□ -0.93
SREBF1-205ENST00000395757 EPM2AB3EWF7 344 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms