RNA–Protein interactions for RNA: ENST00000395756.5

SREBF1-204, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 3,026 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-204ENST00000395756 FP248Q71RG6 208 aaPredicted RBP11.79□□□□□ -0.52
SREBF1-204ENST00000395756 LINC00846Q9NV44 126 aa11.79□□□□□ -0.52
SREBF1-204ENST00000395756 INAFM2P0DMQ5 153 aa11.78□□□□□ -0.52
SREBF1-204ENST00000395756 SERP1Q9Y6X1 66 aa11.78□□□□□ -0.52
SREBF1-204ENST00000395756 NDUFC2-KCTD14E9PQ53 114 aa11.77□□□□□ -0.52
SREBF1-204ENST00000395756 IGLV6-57P01721 117 aa11.77□□□□□ -0.53
SREBF1-204ENST00000395756 LINC00575Q6W349 94 aa11.75□□□□□ -0.53
SREBF1-204ENST00000395756 VPREB1P12018 145 aa11.74□□□□□ -0.53
SREBF1-204ENST00000395756 DNAH10Q8IVF4 4471 aa11.73□□□□□ -0.53
SREBF1-204ENST00000395756 SMIM26A0A096LP01 95 aa11.73□□□□□ -0.53
SREBF1-204ENST00000395756 Q6ZQY7 126 aa11.73□□□□□ -0.53
SREBF1-204ENST00000395756 ZNF73O43830 326 aaPredicted RBP11.72□□□□□ -0.53
SREBF1-204ENST00000395756 Q6JHZ5 121 aa11.72□□□□□ -0.53
SREBF1-204ENST00000395756 DIRC1Q969H9 104 aa11.72□□□□□ -0.53
SREBF1-204ENST00000395756 MPLKIPQ8TAP9 179 aa11.71□□□□□ -0.53
SREBF1-204ENST00000395756 MUC7Q8TAX7 377 aa11.71□□□□□ -0.53
SREBF1-204ENST00000395756 RBM3P98179 157 aaKnown RBP11.71□□□□□ -0.54
SREBF1-204ENST00000395756 LAMTOR3Q9UHA4 124 aa11.71□□□□□ -0.54
SREBF1-204ENST00000395756 SNURFQ9Y675 71 aa11.71□□□□□ -0.54
SREBF1-204ENST00000395756 DNAH9Q9NYC9 4486 aa11.7□□□□□ -0.54
SREBF1-204ENST00000395756 FAM168BA1KXE4 195 aa11.7□□□□□ -0.54
SREBF1-204ENST00000395756 TMEM256-PLSCR3K7ERE1 68 aa11.7□□□□□ -0.54
SREBF1-204ENST00000395756 SERTAD4-AS1Q5TG53 156 aa11.7□□□□□ -0.54
SREBF1-204ENST00000395756 FAM19A1Q7Z5A9 133 aa11.7□□□□□ -0.54
SREBF1-204ENST00000395756 UBE2DNLQ8IWF7 75 aa11.69□□□□□ -0.54
SREBF1-204ENST00000395756 RPL37AP8A6NKH3 93 aa11.69□□□□□ -0.54
SREBF1-204ENST00000395756 H7BZZ5 65 aa11.68□□□□□ -0.54
SREBF1-204ENST00000395756 M0R378 163 aa11.68□□□□□ -0.54
SREBF1-204ENST00000395756 NKAPP1Q8N9T2 125 aa11.68□□□□□ -0.54
SREBF1-204ENST00000395756 KRTAP1-5Q9BYS1 174 aa11.68□□□□□ -0.54
SREBF1-204ENST00000395756 COX7BP24311 80 aa11.67□□□□□ -0.54
SREBF1-204ENST00000395756 EPM2AB3EWF7 344 aa11.65□□□□□ -0.54
SREBF1-204ENST00000395756 LINC00167Q96N53 147 aa11.65□□□□□ -0.54
SREBF1-204ENST00000395756 RMI2Q96E14 147 aa11.65□□□□□ -0.55
SREBF1-204ENST00000395756 OBSCN-AS1Q96MR7 158 aa11.64□□□□□ -0.55
SREBF1-204ENST00000395756 DNAH7Q8WXX0 4024 aa11.64□□□□□ -0.55
SREBF1-204ENST00000395756 PSCAO43653 123 aa11.64□□□□□ -0.55
SREBF1-204ENST00000395756 TRBV7-6A0A0J9YX20 115 aa11.63□□□□□ -0.55
SREBF1-204ENST00000395756 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.62□□□□□ -0.55
SREBF1-204ENST00000395756 F8WEM9 126 aa11.62□□□□□ -0.55
SREBF1-204ENST00000395756 C7orf33Q8WU49 177 aa11.62□□□□□ -0.55
SREBF1-204ENST00000395756 JMJD7-PLA2G4BH0Y9G9 81 aa11.61□□□□□ -0.55
SREBF1-204ENST00000395756 CCKP06307 115 aa11.61□□□□□ -0.55
SREBF1-204ENST00000395756 DEFB105AQ8NG35 78 aa11.61□□□□□ -0.55
SREBF1-204ENST00000395756 DNAH1Q9P2D7 4330 aa11.61□□□□□ -0.55
SREBF1-204ENST00000395756 DNHD1Q96M86 4753 aa11.6□□□□□ -0.55
SREBF1-204ENST00000395756 IGKV2-24A0A0C4DH68 120 aa11.6□□□□□ -0.55
SREBF1-204ENST00000395756 ELOF1P60002 83 aaKnown RBP11.6□□□□□ -0.55
SREBF1-204ENST00000395756 PMAIP1Q13794 54 aa11.59□□□□□ -0.55
SREBF1-204ENST00000395756 M0R2N4 97 aa11.58□□□□□ -0.56
SREBF1-204ENST00000395756 PLECQ15149 4684 aaKnown RBP11.58□□□□□ -0.56
SREBF1-204ENST00000395756 B9D2Q9BPU9 175 aa11.57□□□□□ -0.56
SREBF1-204ENST00000395756 APLNQ9ULZ1 77 aa11.57□□□□□ -0.56
SREBF1-204ENST00000395756 FAM229BQ4G0N7 80 aa11.55□□□□□ -0.56
SREBF1-204ENST00000395756 PRKDCP78527 4128 aaKnown RBP11.54□□□□□ -0.56
SREBF1-204ENST00000395756 KRTAP7-1Q8IUC3 87 aa11.54□□□□□ -0.56
SREBF1-204ENST00000395756 LINC00528Q8N1L1 170 aa11.54□□□□□ -0.56
SREBF1-204ENST00000395756 MEGF8Q7Z7M0 2845 aa11.52□□□□□ -0.57
SREBF1-204ENST00000395756 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.51□□□□□ -0.57
SREBF1-204ENST00000395756 TLX1NBP0CAT3 122 aa11.5□□□□□ -0.57
SREBF1-204ENST00000395756 Q6ZQT0 140 aa11.49□□□□□ -0.57
SREBF1-204ENST00000395756 KCNQ1DNQ9H478 68 aa11.49□□□□□ -0.57
SREBF1-204ENST00000395756 TRAV7A0A075B6U4 112 aa11.48□□□□□ -0.57
SREBF1-204ENST00000395756 A0A096LNI7 61 aa11.48□□□□□ -0.57
SREBF1-204ENST00000395756 ETDCA0A1B0GVM5 59 aa11.47□□□□□ -0.57
SREBF1-204ENST00000395756 CHTF8P0CG12 524 aa11.47□□□□□ -0.57
SREBF1-204ENST00000395756 MRPL55Q7Z7F7 128 aaKnown RBP11.47□□□□□ -0.57
SREBF1-204ENST00000395756 IGLV1-50A0A075B6I6 118 aa11.46□□□□□ -0.57
SREBF1-204ENST00000395756 STARD9Q9P2P6 4700 aa11.46□□□□□ -0.57
SREBF1-204ENST00000395756 FUSP35637 526 aaKnown RBP eCLIP11.46□□□□□ -0.58
SREBF1-204ENST00000395756 ST20-AS1Q8NBB2 130 aa11.45□□□□□ -0.58
SREBF1-204ENST00000395756 HAMPP81172 84 aa11.45□□□□□ -0.58
SREBF1-204ENST00000395756 KLKP1Q107X0 134 aa11.45□□□□□ -0.58
SREBF1-204ENST00000395756 UBL5Q9BZL1 73 aa11.45□□□□□ -0.58
SREBF1-204ENST00000395756 SRRM2Q9UQ35 2752 aaKnown RBP11.44□□□□□ -0.58
SREBF1-204ENST00000395756 A0A1W2PNN7 141 aa11.44□□□□□ -0.58
SREBF1-204ENST00000395756 UBE2BP63146 152 aa11.44□□□□□ -0.58
SREBF1-204ENST00000395756 Q9BRP9 147 aa11.44□□□□□ -0.58
SREBF1-204ENST00000395756 LRCOL1A6NCL2 159 aa11.43□□□□□ -0.58
SREBF1-204ENST00000395756 TGP01266 2768 aa11.42□□□□□ -0.58
SREBF1-204ENST00000395756 ERC2-IT1O76042 136 aa11.41□□□□□ -0.58
SREBF1-204ENST00000395756 SCXQ7RTU7 201 aa11.41□□□□□ -0.58
SREBF1-204ENST00000395756 Q6ZRX8 168 aa11.41□□□□□ -0.58
SREBF1-204ENST00000395756 Q8N377 158 aa11.4□□□□□ -0.58
SREBF1-204ENST00000395756 LOC110117498A0A087WWA1 95 aa11.4□□□□□ -0.58
SREBF1-204ENST00000395756 NBDYA0A0U1RRE5 68 aa11.4□□□□□ -0.58
SREBF1-204ENST00000395756 PLA2G2DQ9UNK4 145 aa11.39□□□□□ -0.59
SREBF1-204ENST00000395756 NUPR2A6NF83 97 aa11.39□□□□□ -0.59
SREBF1-204ENST00000395756 PRLHP81277 87 aa11.38□□□□□ -0.59
SREBF1-204ENST00000395756 ATP5EP2Q5VTU8 51 aa11.37□□□□□ -0.59
SREBF1-204ENST00000395756 TRBV7-4A0A0J9YYF1 115 aa11.36□□□□□ -0.59
SREBF1-204ENST00000395756 C16orf90A8MZG2 172 aa11.36□□□□□ -0.59
SREBF1-204ENST00000395756 C3orf84H3BNL1 204 aa11.36□□□□□ -0.59
SREBF1-204ENST00000395756 REG3GQ6UW15 175 aa11.36□□□□□ -0.59
SREBF1-204ENST00000395756 KRTAP4-16G5E9R7 235 aaPredicted RBP11.36□□□□□ -0.59
SREBF1-204ENST00000395756 PRYO14603 147 aa11.36□□□□□ -0.59
SREBF1-204ENST00000395756 Q6ZVQ6 151 aa11.36□□□□□ -0.59
SREBF1-204ENST00000395756 PHF5AQ7RTV0 110 aaKnown RBP11.35□□□□□ -0.59
SREBF1-204ENST00000395756 IGLV5-37A0A075B6J1 123 aa11.35□□□□□ -0.59
SREBF1-204ENST00000395756 H3BQ85 93 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms