RNA–Protein interactions for RNA: ENST00000394888.8

CPSF7-202, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

APPRIS P4 TSL 2 BASIC

Gene CPSF7, Length 3,650 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-202ENST00000394888 UPK3BQ9BT76 320 aa9.93□□□□□ -0.82
CPSF7-202ENST00000394888 KCNQ1DNQ9H478 68 aa9.93□□□□□ -0.82
CPSF7-202ENST00000394888 F8WDY8 70 aa9.93□□□□□ -0.82
CPSF7-202ENST00000394888 COX7BP24311 80 aa9.92□□□□□ -0.82
CPSF7-202ENST00000394888 SYCNQ0VAF6 134 aa9.92□□□□□ -0.82
CPSF7-202ENST00000394888 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.91□□□□□ -0.82
CPSF7-202ENST00000394888 STAB2Q8WWQ8 2551 aa9.91□□□□□ -0.82
CPSF7-202ENST00000394888 RBM3P98179 157 aaKnown RBP9.91□□□□□ -0.82
CPSF7-202ENST00000394888 FAM19A1Q7Z5A9 133 aa9.91□□□□□ -0.82
CPSF7-202ENST00000394888 C7orf33Q8WU49 177 aa9.91□□□□□ -0.82
CPSF7-202ENST00000394888 PLA2G2DQ9UNK4 145 aa9.91□□□□□ -0.82
CPSF7-202ENST00000394888 TRAV10A0A0B4J240 114 aa9.9□□□□□ -0.82
CPSF7-202ENST00000394888 IGLV5-37A0A075B6J1 123 aa9.9□□□□□ -0.82
CPSF7-202ENST00000394888 C3orf22Q8N5N4 141 aa9.9□□□□□ -0.82
CPSF7-202ENST00000394888 FRAS1Q86XX4 4008 aa9.89□□□□□ -0.83
CPSF7-202ENST00000394888 SPRR1AP35321 89 aa9.89□□□□□ -0.83
CPSF7-202ENST00000394888 Q9BRP9 147 aa9.89□□□□□ -0.83
CPSF7-202ENST00000394888 USP17L23D6RBM5 183 aa9.88□□□□□ -0.83
CPSF7-202ENST00000394888 COX7CP15954 63 aa9.87□□□□□ -0.83
CPSF7-202ENST00000394888 Q6ZVQ6 151 aa9.86□□□□□ -0.83
CPSF7-202ENST00000394888 SRRM2Q9UQ35 2752 aaKnown RBP9.86□□□□□ -0.83
CPSF7-202ENST00000394888 DNAH8Q96JB1 4490 aa9.86□□□□□ -0.83
CPSF7-202ENST00000394888 UQCRQO14949 82 aa9.85□□□□□ -0.83
CPSF7-202ENST00000394888 Q8N377 158 aa9.85□□□□□ -0.83
CPSF7-202ENST00000394888 IGLV1-50A0A075B6I6 118 aa9.85□□□□□ -0.83
CPSF7-202ENST00000394888 CRYGAP11844 174 aa9.84□□□□□ -0.83
CPSF7-202ENST00000394888 ATP5EP2Q5VTU8 51 aa9.84□□□□□ -0.83
CPSF7-202ENST00000394888 MRAPQ8TCY5 172 aa9.84□□□□□ -0.83
CPSF7-202ENST00000394888 LAMTOR3Q9UHA4 124 aa9.84□□□□□ -0.83
CPSF7-202ENST00000394888 ATOX1O00244 68 aa9.83□□□□□ -0.84
CPSF7-202ENST00000394888 TNP2Q05952 138 aa9.83□□□□□ -0.84
CPSF7-202ENST00000394888 DNHD1Q96M86 4753 aa9.82□□□□□ -0.84
CPSF7-202ENST00000394888 DNAH17Q9UFH2 4485 aa9.81□□□□□ -0.84
CPSF7-202ENST00000394888 H3BQ85 93 aa9.8□□□□□ -0.84
CPSF7-202ENST00000394888 MGAM2Q2M2H8 2515 aa9.8□□□□□ -0.84
CPSF7-202ENST00000394888 Q6ZRX8 168 aa9.8□□□□□ -0.84
CPSF7-202ENST00000394888 RPL37AP8A6NKH3 93 aa9.79□□□□□ -0.84
CPSF7-202ENST00000394888 IGLV5-48A0A075B6I7 105 aa9.79□□□□□ -0.84
CPSF7-202ENST00000394888 ERC2-IT1O76042 136 aa9.79□□□□□ -0.84
CPSF7-202ENST00000394888 DSCR8Q96T75 97 aa9.79□□□□□ -0.84
CPSF7-202ENST00000394888 MEGF8Q7Z7M0 2845 aa9.78□□□□□ -0.84
CPSF7-202ENST00000394888 SERP2Q8N6R1 65 aa9.77□□□□□ -0.84
CPSF7-202ENST00000394888 KRTAP11-1Q8IUC1 163 aa9.77□□□□□ -0.85
CPSF7-202ENST00000394888 UBL5Q9BZL1 73 aa9.77□□□□□ -0.85
CPSF7-202ENST00000394888 ST20-AS1Q8NBB2 130 aa9.76□□□□□ -0.85
CPSF7-202ENST00000394888 PDE6GP18545 87 aa9.76□□□□□ -0.85
CPSF7-202ENST00000394888 CXCL6P80162 114 aa9.76□□□□□ -0.85
CPSF7-202ENST00000394888 C9orf153Q5TBE3 101 aa9.76□□□□□ -0.85
CPSF7-202ENST00000394888 APLNQ9ULZ1 77 aa9.76□□□□□ -0.85
CPSF7-202ENST00000394888 PRYO14603 147 aa9.74□□□□□ -0.85
CPSF7-202ENST00000394888 ALMS1Q8TCU4 4167 aa9.74□□□□□ -0.85
CPSF7-202ENST00000394888 DNAH6Q9C0G6 4158 aa9.74□□□□□ -0.85
CPSF7-202ENST00000394888 SMIM29Q86T20 159 aa9.73□□□□□ -0.85
CPSF7-202ENST00000394888 NKAPP1Q8N9T2 125 aa9.73□□□□□ -0.85
CPSF7-202ENST00000394888 MDFIQ99750 246 aa9.73□□□□□ -0.85
CPSF7-202ENST00000394888 A0A096LNI7 61 aa9.72□□□□□ -0.85
CPSF7-202ENST00000394888 A0A1W2PNN7 141 aa9.72□□□□□ -0.85
CPSF7-202ENST00000394888 MRPL55Q7Z7F7 128 aaKnown RBP9.72□□□□□ -0.85
CPSF7-202ENST00000394888 A0A1W2PNM2 257 aa9.71□□□□□ -0.85
CPSF7-202ENST00000394888 CNBPP62633 177 aaKnown RBP9.71□□□□□ -0.85
CPSF7-202ENST00000394888 FAM19A5Q7Z5A7 132 aaPredicted RBP9.7□□□□□ -0.86
CPSF7-202ENST00000394888 GHRHP01286 108 aa9.7□□□□□ -0.86
CPSF7-202ENST00000394888 SCXQ7RTU7 201 aa9.69□□□□□ -0.86
CPSF7-202ENST00000394888 IGKV4-1P06312 121 aa9.68□□□□□ -0.86
CPSF7-202ENST00000394888 LOC107984640A0A0U1RRK4 108 aa9.68□□□□□ -0.86
CPSF7-202ENST00000394888 DNAH11Q96DT5 4516 aa9.68□□□□□ -0.86
CPSF7-202ENST00000394888 Q6ZRN7 208 aaPredicted RBP9.68□□□□□ -0.86
CPSF7-202ENST00000394888 LRCOL1A6NCL2 159 aa9.67□□□□□ -0.86
CPSF7-202ENST00000394888 OXTP01178 125 aa9.67□□□□□ -0.86
CPSF7-202ENST00000394888 DEFB105AQ8NG35 78 aa9.67□□□□□ -0.86
CPSF7-202ENST00000394888 DHRS4-AS1Q9P1J3 65 aa9.67□□□□□ -0.86
CPSF7-202ENST00000394888 HAMPP81172 84 aa9.66□□□□□ -0.86
CPSF7-202ENST00000394888 Q8N9L7 120 aa9.66□□□□□ -0.86
CPSF7-202ENST00000394888 PKD1P98161 4303 aa9.66□□□□□ -0.86
CPSF7-202ENST00000394888 DNAH5Q8TE73 4624 aa9.66□□□□□ -0.86
CPSF7-202ENST00000394888 C16orf90A8MZG2 172 aa9.65□□□□□ -0.86
CPSF7-202ENST00000394888 SMIM20Q8N5G0 67 aa9.65□□□□□ -0.86
CPSF7-202ENST00000394888 RMI2Q96E14 147 aa9.64□□□□□ -0.87
CPSF7-202ENST00000394888 PANO1I0J062 215 aa9.63□□□□□ -0.87
CPSF7-202ENST00000394888 BCE1O60756 84 aa9.63□□□□□ -0.87
CPSF7-202ENST00000394888 SPRR4Q96PI1 79 aa9.63□□□□□ -0.87
CPSF7-202ENST00000394888 REG3GQ6UW15 175 aa9.62□□□□□ -0.87
CPSF7-202ENST00000394888 A0A0G2JQZ4 141 aa9.62□□□□□ -0.87
CPSF7-202ENST00000394888 C3orf84H3BNL1 204 aa9.62□□□□□ -0.87
CPSF7-202ENST00000394888 BPY2O14599 106 aa9.61□□□□□ -0.87
CPSF7-202ENST00000394888 CHTF8P0CG12 524 aa9.61□□□□□ -0.87
CPSF7-202ENST00000394888 HYDINQ4G0P3 5121 aa9.61□□□□□ -0.87
CPSF7-202ENST00000394888 B9D2Q9BPU9 175 aa9.6□□□□□ -0.87
CPSF7-202ENST00000394888 FAT2Q9NYQ8 4349 aa9.6□□□□□ -0.87
CPSF7-202ENST00000394888 TRAV7A0A075B6U4 112 aa9.59□□□□□ -0.87
CPSF7-202ENST00000394888 ETDCA0A1B0GVM5 59 aa9.59□□□□□ -0.87
CPSF7-202ENST00000394888 EPM2AB3EWF7 344 aa9.58□□□□□ -0.88
CPSF7-202ENST00000394888 H7BZZ5 65 aa9.58□□□□□ -0.88
CPSF7-202ENST00000394888 Q8NBF4 154 aa9.58□□□□□ -0.88
CPSF7-202ENST00000394888 C1orf137Q5JT78 98 aa9.57□□□□□ -0.88
CPSF7-202ENST00000394888 PRLHP81277 87 aa9.57□□□□□ -0.88
CPSF7-202ENST00000394888 KLKP1Q107X0 134 aa9.56□□□□□ -0.88
CPSF7-202ENST00000394888 DPH3Q96FX2 82 aa9.56□□□□□ -0.88
CPSF7-202ENST00000394888 IGLV8-61A0A075B6I0 122 aa9.56□□□□□ -0.88
CPSF7-202ENST00000394888 DSCR10P59022 87 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 114.5 ms