RNA–Protein interactions for RNA: ENST00000394601.8

PTBP1-204, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 1 (best) BASIC

Gene PTBP1, Length 3,185 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-204ENST00000394601 MUC7Q8TAX7 377 aa10.37□□□□□ -0.75
PTBP1-204ENST00000394601 A0A0J9YWU9 116 aa10.37□□□□□ -0.75
PTBP1-204ENST00000394601 KRTAP10-11P60412 298 aa10.36□□□□□ -0.75
PTBP1-204ENST00000394601 KLK12Q9UKR0 248 aa10.36□□□□□ -0.75
PTBP1-204ENST00000394601 TRBV10-3A0A0K0K1G6 114 aa10.35□□□□□ -0.75
PTBP1-204ENST00000394601 KRTAP26-1Q6PEX3 210 aa10.34□□□□□ -0.75
PTBP1-204ENST00000394601 CYSRT1A8MQ03 144 aa10.34□□□□□ -0.75
PTBP1-204ENST00000394601 LYSTQ99698 3801 aa10.33□□□□□ -0.76
PTBP1-204ENST00000394601 SPAG11BQ08648 103 aa10.32□□□□□ -0.76
PTBP1-204ENST00000394601 HUWE1Q7Z6Z7 4374 aaKnown RBP10.32□□□□□ -0.76
PTBP1-204ENST00000394601 GVQW2A0A096LPI5 108 aaPredicted RBP10.32□□□□□ -0.76
PTBP1-204ENST00000394601 PRYO14603 147 aa10.32□□□□□ -0.76
PTBP1-204ENST00000394601 RETNQ9HD89 108 aa10.32□□□□□ -0.76
PTBP1-204ENST00000394601 OXLD1Q5BKU9 147 aa10.31□□□□□ -0.76
PTBP1-204ENST00000394601 IGLV6-57P01721 117 aa10.31□□□□□ -0.76
PTBP1-204ENST00000394601 ESRGQ1W209 222 aa10.31□□□□□ -0.76
PTBP1-204ENST00000394601 F8WDY8 70 aa10.3□□□□□ -0.76
PTBP1-204ENST00000394601 HIGD2BQ4VC39 106 aa10.3□□□□□ -0.76
PTBP1-204ENST00000394601 C6orf48Q9UBA6 75 aa10.3□□□□□ -0.76
PTBP1-204ENST00000394601 TRBV7-4A0A0J9YYF1 115 aa10.3□□□□□ -0.76
PTBP1-204ENST00000394601 WFDC10BQ8IUB3 73 aa10.29□□□□□ -0.76
PTBP1-204ENST00000394601 DEFB116Q30KQ4 102 aa10.29□□□□□ -0.76
PTBP1-204ENST00000394601 H3BNG1 76 aa10.28□□□□□ -0.76
PTBP1-204ENST00000394601 DIRC1Q969H9 104 aa10.28□□□□□ -0.76
PTBP1-204ENST00000394601 EGFEM1PQ0D2K5 195 aa10.27□□□□□ -0.77
PTBP1-204ENST00000394601 STAB1Q9NY15 2570 aa10.26□□□□□ -0.77
PTBP1-204ENST00000394601 MAST4O15021 2626 aa10.26□□□□□ -0.77
PTBP1-204ENST00000394601 KPRPQ5T749 579 aaPredicted RBP10.26□□□□□ -0.77
PTBP1-204ENST00000394601 Q6ZTC4 211 aa10.26□□□□□ -0.77
PTBP1-204ENST00000394601 SMIM29Q86T20 159 aa10.25□□□□□ -0.77
PTBP1-204ENST00000394601 A8MU10 97 aa10.25□□□□□ -0.77
PTBP1-204ENST00000394601 NDUFC1O43677 76 aa10.25□□□□□ -0.77
PTBP1-204ENST00000394601 COX7BP24311 80 aa10.24□□□□□ -0.77
PTBP1-204ENST00000394601 SPTSSBQ8NFR3 76 aa10.24□□□□□ -0.77
PTBP1-204ENST00000394601 CXCL6P80162 114 aa10.24□□□□□ -0.77
PTBP1-204ENST00000394601 ZNF73O43830 326 aaPredicted RBP10.23□□□□□ -0.77
PTBP1-204ENST00000394601 C15orf56Q8N910 161 aa10.23□□□□□ -0.77
PTBP1-204ENST00000394601 EPM2AB3EWF7 344 aa10.22□□□□□ -0.77
PTBP1-204ENST00000394601 DNAH10Q8IVF4 4471 aa10.22□□□□□ -0.77
PTBP1-204ENST00000394601 LOC110117498A0A087WWA1 95 aa10.22□□□□□ -0.77
PTBP1-204ENST00000394601 PMAIP1Q13794 54 aa10.22□□□□□ -0.77
PTBP1-204ENST00000394601 FLNBO75369 2602 aaKnown RBP10.2□□□□□ -0.78
PTBP1-204ENST00000394601 KRTAP24-1Q3LI83 254 aa10.2□□□□□ -0.78
PTBP1-204ENST00000394601 VPREB1P12018 145 aa10.18□□□□□ -0.78
PTBP1-204ENST00000394601 A0A0G2JQZ4 141 aa10.18□□□□□ -0.78
PTBP1-204ENST00000394601 A0A1W2PNN7 141 aa10.18□□□□□ -0.78
PTBP1-204ENST00000394601 DNAH9Q9NYC9 4486 aa10.17□□□□□ -0.78
PTBP1-204ENST00000394601 IGKV4-1P06312 121 aa10.17□□□□□ -0.78
PTBP1-204ENST00000394601 Q6ZRU5 148 aa10.17□□□□□ -0.78
PTBP1-204ENST00000394601 C1orf64Q8NEQ6 169 aa10.17□□□□□ -0.78
PTBP1-204ENST00000394601 A8MUN3 132 aa10.16□□□□□ -0.78
PTBP1-204ENST00000394601 DYNC2H1Q8NCM8 4307 aaKnown RBP10.16□□□□□ -0.78
PTBP1-204ENST00000394601 DNAH7Q8WXX0 4024 aa10.16□□□□□ -0.78
PTBP1-204ENST00000394601 PDE6GP18545 87 aa10.16□□□□□ -0.78
PTBP1-204ENST00000394601 CAMK2N2Q96S95 79 aa10.15□□□□□ -0.78
PTBP1-204ENST00000394601 NBEAL1Q6ZS30 2694 aa10.14□□□□□ -0.79
PTBP1-204ENST00000394601 ATP5EP56381 51 aaPredicted RBP10.14□□□□□ -0.79
PTBP1-204ENST00000394601 LINC01556Q5JQF7 62 aa10.14□□□□□ -0.79
PTBP1-204ENST00000394601 WFDC13Q8IUB5 93 aa10.14□□□□□ -0.79
PTBP1-204ENST00000394601 ELOF1P60002 83 aaKnown RBP10.13□□□□□ -0.79
PTBP1-204ENST00000394601 Q6ZRP5 223 aa10.13□□□□□ -0.79
PTBP1-204ENST00000394601 NOTCH1P46531 2555 aa10.12□□□□□ -0.79
PTBP1-204ENST00000394601 OCR1Q9BZK8 76 aa10.12□□□□□ -0.79
PTBP1-204ENST00000394601 RPL37AP8A6NKH3 93 aa10.12□□□□□ -0.79
PTBP1-204ENST00000394601 CSMD3Q7Z407 3707 aa10.11□□□□□ -0.79
PTBP1-204ENST00000394601 COL7A1Q02388 2944 aa10.1□□□□□ -0.79
PTBP1-204ENST00000394601 BCE1O60756 84 aa10.1□□□□□ -0.79
PTBP1-204ENST00000394601 DEFB131BA0A096LNP1 70 aa10.1□□□□□ -0.79
PTBP1-204ENST00000394601 TRAV22A0A0B4J277 110 aa10.08□□□□□ -0.8
PTBP1-204ENST00000394601 DNAH10OSP0CZ25 163 aa10.08□□□□□ -0.8
PTBP1-204ENST00000394601 ST20-AS1Q8NBB2 130 aa10.08□□□□□ -0.8
PTBP1-204ENST00000394601 CHKB-CPT1BH3BT56 60 aa10.08□□□□□ -0.8
PTBP1-204ENST00000394601 C11orf45Q8TAV5 145 aa10.08□□□□□ -0.8
PTBP1-204ENST00000394601 LINC00528Q8N1L1 170 aa10.07□□□□□ -0.8
PTBP1-204ENST00000394601 M0R378 163 aa10.07□□□□□ -0.8
PTBP1-204ENST00000394601 hDV103S1A0JD37 113 aa10.06□□□□□ -0.8
PTBP1-204ENST00000394601 K7EQZ3 153 aa10.04□□□□□ -0.8
PTBP1-204ENST00000394601 SERTAD4-AS1Q5TG53 156 aa10.04□□□□□ -0.8
PTBP1-204ENST00000394601 IGKV2D-24A0A075B6R9 120 aa10.03□□□□□ -0.8
PTBP1-204ENST00000394601 CASC10Q5T4H9 136 aa10.03□□□□□ -0.8
PTBP1-204ENST00000394601 NKAPP1Q8N9T2 125 aa10.02□□□□□ -0.8
PTBP1-204ENST00000394601 LINC00588Q9Y4M8 146 aa10.02□□□□□ -0.8
PTBP1-204ENST00000394601 KRTAP7-1Q8IUC3 87 aa10.02□□□□□ -0.81
PTBP1-204ENST00000394601 LINC00208Q96KT6 92 aa10.02□□□□□ -0.81
PTBP1-204ENST00000394601 H3BQ85 93 aa10.02□□□□□ -0.81
PTBP1-204ENST00000394601 SYCNQ0VAF6 134 aa10.01□□□□□ -0.81
PTBP1-204ENST00000394601 COL6A5A8TX70 2615 aa10□□□□□ -0.81
PTBP1-204ENST00000394601 IGLV2-33A0A075B6J2 118 aaPredicted RBP10□□□□□ -0.81
PTBP1-204ENST00000394601 TLX1NBP0CAT3 122 aa10□□□□□ -0.81
PTBP1-204ENST00000394601 KCNQ1DNQ9H478 68 aa10□□□□□ -0.81
PTBP1-204ENST00000394601 PRR15LQ9BU68 103 aa10□□□□□ -0.81
PTBP1-204ENST00000394601 C1orf137Q5JT78 98 aa9.98□□□□□ -0.81
PTBP1-204ENST00000394601 MRPL55Q7Z7F7 128 aaKnown RBP9.98□□□□□ -0.81
PTBP1-204ENST00000394601 PLECQ15149 4684 aaKnown RBP9.98□□□□□ -0.81
PTBP1-204ENST00000394601 KRTAP4-16G5E9R7 235 aaPredicted RBP9.98□□□□□ -0.81
PTBP1-204ENST00000394601 RPL37AP61513 92 aaKnown RBP9.97□□□□□ -0.81
PTBP1-204ENST00000394601 C7orf33Q8WU49 177 aa9.97□□□□□ -0.81
PTBP1-204ENST00000394601 A0A096LNI7 61 aa9.97□□□□□ -0.81
PTBP1-204ENST00000394601 UBE2BP63146 152 aa9.96□□□□□ -0.81
PTBP1-204ENST00000394601 PLA2G2DQ9UNK4 145 aa9.96□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 95.4 ms