RNA–Protein interactions for RNA: ENST00000394419.8

ACTN1-203, Transcript of actinin alpha 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ACTN1, Length 3,464 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-203ENST00000394419 LINC00336Q6ZUF6 198 aa7□□□□□ -1.29
ACTN1-203ENST00000394419 VPREB1P12018 145 aa7□□□□□ -1.29
ACTN1-203ENST00000394419 UBE2BP63146 152 aa7□□□□□ -1.29
ACTN1-203ENST00000394419 KMT2BQ9UMN6 2715 aaPredicted RBP7□□□□□ -1.29
ACTN1-203ENST00000394419 PDE6GP18545 87 aa6.99□□□□□ -1.29
ACTN1-203ENST00000394419 RPS28P62857 69 aaKnown RBP6.99□□□□□ -1.29
ACTN1-203ENST00000394419 IGKV2-24A0A0C4DH68 120 aa6.99□□□□□ -1.29
ACTN1-203ENST00000394419 C15orf56Q8N910 161 aa6.99□□□□□ -1.29
ACTN1-203ENST00000394419 TRAV10A0A0B4J240 114 aa6.98□□□□□ -1.29
ACTN1-203ENST00000394419 Q5XG85 94 aa6.98□□□□□ -1.29
ACTN1-203ENST00000394419 ELOF1P60002 83 aaKnown RBP6.98□□□□□ -1.29
ACTN1-203ENST00000394419 STAB2Q8WWQ8 2551 aa6.97□□□□□ -1.29
ACTN1-203ENST00000394419 GVQW2A0A096LPI5 108 aaPredicted RBP6.97□□□□□ -1.29
ACTN1-203ENST00000394419 FAM236DA0A1B0GTK5 79 aa6.97□□□□□ -1.29
ACTN1-203ENST00000394419 PSCAO43653 123 aa6.97□□□□□ -1.29
ACTN1-203ENST00000394419 FAM236CP0DP71 79 aa6.97□□□□□ -1.29
ACTN1-203ENST00000394419 FAM168BA1KXE4 195 aa6.96□□□□□ -1.29
ACTN1-203ENST00000394419 SEC61GP60059 68 aa6.96□□□□□ -1.29
ACTN1-203ENST00000394419 KRTAP24-1Q3LI83 254 aa6.96□□□□□ -1.29
ACTN1-203ENST00000394419 SERTAD4-AS1Q5TG53 156 aa6.96□□□□□ -1.3
ACTN1-203ENST00000394419 TMEM258P61165 79 aa6.96□□□□□ -1.3
ACTN1-203ENST00000394419 C7orf33Q8WU49 177 aa6.96□□□□□ -1.3
ACTN1-203ENST00000394419 LOC110117498A0A087WWA1 95 aa6.95□□□□□ -1.3
ACTN1-203ENST00000394419 BPY2O14599 106 aa6.95□□□□□ -1.3
ACTN1-203ENST00000394419 H3BQ85 93 aa6.95□□□□□ -1.3
ACTN1-203ENST00000394419 FUSP35637 526 aaKnown RBP eCLIP6.94□□□□□ -1.3
ACTN1-203ENST00000394419 LINC01556Q5JQF7 62 aa6.94□□□□□ -1.3
ACTN1-203ENST00000394419 CASC10Q5T4H9 136 aa6.94□□□□□ -1.3
ACTN1-203ENST00000394419 RMI2Q96E14 147 aa6.94□□□□□ -1.3
ACTN1-203ENST00000394419 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.94□□□□□ -1.3
ACTN1-203ENST00000394419 UBE2DNLQ8IWF7 75 aa6.94□□□□□ -1.3
ACTN1-203ENST00000394419 BRK1Q8WUW1 75 aa6.94□□□□□ -1.3
ACTN1-203ENST00000394419 PRO0628Q9UI54 55 aa6.93□□□□□ -1.3
ACTN1-203ENST00000394419 LINC00528Q8N1L1 170 aa6.92□□□□□ -1.3
ACTN1-203ENST00000394419 ST20-AS1Q8NBB2 130 aa6.92□□□□□ -1.3
ACTN1-203ENST00000394419 TRAV7A0A075B6U4 112 aa6.92□□□□□ -1.3
ACTN1-203ENST00000394419 TM2D3Q9BRN9 247 aa6.92□□□□□ -1.3
ACTN1-203ENST00000394419 HIGD2AQ9BW72 106 aa6.92□□□□□ -1.3
ACTN1-203ENST00000394419 F8WDY8 70 aa6.91□□□□□ -1.3
ACTN1-203ENST00000394419 V9GYY9 64 aa6.91□□□□□ -1.3
ACTN1-203ENST00000394419 F8WEM9 126 aa6.91□□□□□ -1.3
ACTN1-203ENST00000394419 LINC00588Q9Y4M8 146 aa6.91□□□□□ -1.3
ACTN1-203ENST00000394419 H3BNG1 76 aa6.91□□□□□ -1.3
ACTN1-203ENST00000394419 TENM2Q9NT68 2774 aa6.9□□□□□ -1.3
ACTN1-203ENST00000394419 TRBV7-4A0A0J9YYF1 115 aa6.9□□□□□ -1.31
ACTN1-203ENST00000394419 A0A096LNI7 61 aa6.89□□□□□ -1.31
ACTN1-203ENST00000394419 CXCL6P80162 114 aa6.89□□□□□ -1.31
ACTN1-203ENST00000394419 KRTAP26-1Q6PEX3 210 aa6.89□□□□□ -1.31
ACTN1-203ENST00000394419 A0A0G2JQZ4 141 aa6.88□□□□□ -1.31
ACTN1-203ENST00000394419 A0A1W2PNN7 141 aa6.88□□□□□ -1.31
ACTN1-203ENST00000394419 DEFB116Q30KQ4 102 aa6.88□□□□□ -1.31
ACTN1-203ENST00000394419 C1orf137Q5JT78 98 aa6.88□□□□□ -1.31
ACTN1-203ENST00000394419 C1orf195Q5TG92 126 aa6.87□□□□□ -1.31
ACTN1-203ENST00000394419 Q8N377 158 aa6.87□□□□□ -1.31
ACTN1-203ENST00000394419 FAM30AQ9NZY2 134 aa6.87□□□□□ -1.31
ACTN1-203ENST00000394419 DHRS4-AS1Q9P1J3 65 aa6.86□□□□□ -1.31
ACTN1-203ENST00000394419 TRBV7-6A0A0J9YX20 115 aa6.86□□□□□ -1.31
ACTN1-203ENST00000394419 MRPL55Q7Z7F7 128 aaKnown RBP6.86□□□□□ -1.31
ACTN1-203ENST00000394419 PRLHP81277 87 aa6.86□□□□□ -1.31
ACTN1-203ENST00000394419 DNAH10OSP0CZ25 163 aa6.85□□□□□ -1.31
ACTN1-203ENST00000394419 KCNQ1DNQ9H478 68 aa6.85□□□□□ -1.31
ACTN1-203ENST00000394419 Q6ZRX8 168 aa6.84□□□□□ -1.31
ACTN1-203ENST00000394419 LINC00474Q9P2X8 69 aa6.84□□□□□ -1.31
ACTN1-203ENST00000394419 ERC2-IT1O76042 136 aa6.84□□□□□ -1.31
ACTN1-203ENST00000394419 MPLKIPQ8TAP9 179 aa6.84□□□□□ -1.31
ACTN1-203ENST00000394419 TMEM254Q8TBM7 123 aa6.82□□□□□ -1.32
ACTN1-203ENST00000394419 Q9BRP9 147 aa6.82□□□□□ -1.32
ACTN1-203ENST00000394419 REG3GQ6UW15 175 aa6.82□□□□□ -1.32
ACTN1-203ENST00000394419 IGLV1-50A0A075B6I6 118 aa6.81□□□□□ -1.32
ACTN1-203ENST00000394419 H7BZZ5 65 aa6.81□□□□□ -1.32
ACTN1-203ENST00000394419 PRR4Q16378 134 aa6.81□□□□□ -1.32
ACTN1-203ENST00000394419 PRYO14603 147 aa6.8□□□□□ -1.32
ACTN1-203ENST00000394419 SMIM29Q86T20 159 aa6.8□□□□□ -1.32
ACTN1-203ENST00000394419 WFDC13Q8IUB5 93 aa6.8□□□□□ -1.32
ACTN1-203ENST00000394419 CHTF8P0CG12 524 aa6.8□□□□□ -1.32
ACTN1-203ENST00000394419 CSMD3Q7Z407 3707 aa6.79□□□□□ -1.32
ACTN1-203ENST00000394419 SRRM2Q9UQ35 2752 aaKnown RBP6.79□□□□□ -1.32
ACTN1-203ENST00000394419 A0A1W2PNM2 257 aa6.79□□□□□ -1.32
ACTN1-203ENST00000394419 IGKV4-1P06312 121 aa6.79□□□□□ -1.32
ACTN1-203ENST00000394419 UBE2AP49459 152 aa6.78□□□□□ -1.32
ACTN1-203ENST00000394419 LRCOL1A6NCL2 159 aa6.78□□□□□ -1.32
ACTN1-203ENST00000394419 K7EIL1 84 aa6.78□□□□□ -1.32
ACTN1-203ENST00000394419 A0A087WSZ3 146 aa6.78□□□□□ -1.32
ACTN1-203ENST00000394419 FP248Q71RG6 208 aaPredicted RBP6.77□□□□□ -1.33
ACTN1-203ENST00000394419 Q8NBF4 154 aa6.76□□□□□ -1.33
ACTN1-203ENST00000394419 LINC00476Q8WZB0 136 aa6.76□□□□□ -1.33
ACTN1-203ENST00000394419 SERP1Q9Y6X1 66 aa6.76□□□□□ -1.33
ACTN1-203ENST00000394419 KLKP1Q107X0 134 aa6.75□□□□□ -1.33
ACTN1-203ENST00000394419 PHF5AQ7RTV0 110 aaKnown RBP6.75□□□□□ -1.33
ACTN1-203ENST00000394419 SMIM26A0A096LP01 95 aa6.75□□□□□ -1.33
ACTN1-203ENST00000394419 K7EQZ3 153 aa6.74□□□□□ -1.33
ACTN1-203ENST00000394419 BCE1O60756 84 aa6.74□□□□□ -1.33
ACTN1-203ENST00000394419 NDUFC1O43677 76 aa6.74□□□□□ -1.33
ACTN1-203ENST00000394419 TLX1NBP0CAT3 122 aa6.74□□□□□ -1.33
ACTN1-203ENST00000394419 IGLV5-48A0A075B6I7 105 aa6.73□□□□□ -1.33
ACTN1-203ENST00000394419 RPL37AP61513 92 aaKnown RBP6.73□□□□□ -1.33
ACTN1-203ENST00000394419 ANK2Q01484 3957 aa6.72□□□□□ -1.33
ACTN1-203ENST00000394419 H0Y9J4 135 aa6.71□□□□□ -1.33
ACTN1-203ENST00000394419 KRTAP7-1Q8IUC3 87 aa6.71□□□□□ -1.33
ACTN1-203ENST00000394419 KRTAP1-5Q9BYS1 174 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms