RNA–Protein interactions for RNA: ENST00000393387.5

PHF3-202, Transcript of PHD finger protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHF3, Length 6,947 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-202ENST00000393387 COL6A6A6NMZ7 2263 aa2.03□□□□□ -2.09
PHF3-202ENST00000393387 PKDREJQ9NTG1 2253 aa2.03□□□□□ -2.09
PHF3-202ENST00000393387 MALRD1Q5VYJ5 2156 aa2.02□□□□□ -2.09
PHF3-202ENST00000393387 TNCP24821 2201 aa2.02□□□□□ -2.09
PHF3-202ENST00000393387 PRR14LQ5THK1 2151 aa2.02□□□□□ -2.09
PHF3-202ENST00000393387 SHANK1Q9Y566 2161 aa2.02□□□□□ -2.09
PHF3-202ENST00000393387 NOTCH2NLQ7Z3S9 236 aa2.02□□□□□ -2.09
PHF3-202ENST00000393387 TET2Q6N021 2002 aaPredicted RBP2.02□□□□□ -2.09
PHF3-202ENST00000393387 ATRXP46100 2492 aa2.02□□□□□ -2.09
PHF3-202ENST00000393387 A8MUU9 505 aa2.01□□□□□ -2.09
PHF3-202ENST00000393387 GIG44P09565 113 aaPredicted RBP2.01□□□□□ -2.09
PHF3-202ENST00000393387 PLXNB1O43157 2135 aa2.01□□□□□ -2.09
PHF3-202ENST00000393387 KRTAP21-3Q3LHN1 58 aa2.01□□□□□ -2.09
PHF3-202ENST00000393387 ZCCHC13Q8WW36 166 aaKnown RBP2.01□□□□□ -2.09
PHF3-202ENST00000393387 ASB16-AS1Q495Z4 193 aa2.01□□□□□ -2.09
PHF3-202ENST00000393387 LINC00612Q8N6U2 182 aa2.01□□□□□ -2.09
PHF3-202ENST00000393387 A0A1W2PPR1 153 aa2□□□□□ -2.09
PHF3-202ENST00000393387 EP300Q09472 2414 aaPredicted RBP2□□□□□ -2.09
PHF3-202ENST00000393387 PTPRBP23467 1997 aa2□□□□□ -2.09
PHF3-202ENST00000393387 CPAMD8Q8IZJ3 1885 aa2□□□□□ -2.09
PHF3-202ENST00000393387 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.99□□□□□ -2.092e-6■■■□□ 15.1
PHF3-202ENST00000393387 A0A096LNT2 108 aa1.99□□□□□ -2.09
PHF3-202ENST00000393387 COL4A4P53420 1690 aaPredicted RBP1.98□□□□□ -2.09
PHF3-202ENST00000393387 PRR34Q9NV39 138 aa1.98□□□□□ -2.09
PHF3-202ENST00000393387 MAP1BP46821 2468 aaKnown RBP1.98□□□□□ -2.09
PHF3-202ENST00000393387 RP1L1Q8IWN7 2480 aaPredicted RBP1.98□□□□□ -2.09
PHF3-202ENST00000393387 A0A087WTM6 91 aa1.98□□□□□ -2.09
PHF3-202ENST00000393387 TRIOBPQ9H2D6 2365 aa1.97□□□□□ -2.09
PHF3-202ENST00000393387 SPTBN2O15020 2390 aa1.97□□□□□ -2.09
PHF3-202ENST00000393387 A0A087X002 238 aa1.97□□□□□ -2.09
PHF3-202ENST00000393387 RPS29P62273 56 aaKnown RBP1.97□□□□□ -2.09
PHF3-202ENST00000393387 SPTA1P02549 2419 aa1.96□□□□□ -2.1
PHF3-202ENST00000393387 PANO1I0J062 215 aa1.96□□□□□ -2.1
PHF3-202ENST00000393387 KRTAP10-11P60412 298 aa1.96□□□□□ -2.1
PHF3-202ENST00000393387 ADAMTS20P59510 1910 aa1.96□□□□□ -2.1
PHF3-202ENST00000393387 KRTAP26-1Q6PEX3 210 aa1.96□□□□□ -2.1
PHF3-202ENST00000393387 CACNA1BQ00975 2339 aa1.95□□□□□ -2.1
PHF3-202ENST00000393387 KRTAP4-16G5E9R7 235 aaPredicted RBP1.95□□□□□ -2.1
PHF3-202ENST00000393387 KRTAP17-1Q9BYP8 105 aa1.95□□□□□ -2.1
PHF3-202ENST00000393387 NOTCH3Q9UM47 2321 aa1.95□□□□□ -2.1
PHF3-202ENST00000393387 KRTAP24-1Q3LI83 254 aa1.95□□□□□ -2.1
PHF3-202ENST00000393387 ROS1P08922 2347 aa1.94□□□□□ -2.1
PHF3-202ENST00000393387 TECTAO75443 2155 aa1.93□□□□□ -2.1
PHF3-202ENST00000393387 Q5VSD8 79 aa1.93□□□□□ -2.1
PHF3-202ENST00000393387 FAM186AA6NE01 2351 aa1.93□□□□□ -2.1
PHF3-202ENST00000393387 LINC00472Q9H8W2 130 aa1.93□□□□□ -2.1
PHF3-202ENST00000393387 PCNX1Q96RV3 2341 aa1.93□□□□□ -2.1
PHF3-202ENST00000393387 ZDBF2Q9HCK1 2354 aa1.93□□□□□ -2.1
PHF3-202ENST00000393387 RYR2Q92736 4967 aa1.92□□□□□ -2.1
PHF3-202ENST00000393387 ACACAQ13085 2346 aa1.91□□□□□ -2.1
PHF3-202ENST00000393387 KRTAP11-1Q8IUC1 163 aa1.91□□□□□ -2.1
PHF3-202ENST00000393387 COL27A1Q8IZC6 1860 aaPredicted RBP1.91□□□□□ -2.1
PHF3-202ENST00000393387 KRTAP10-3P60369 221 aa1.91□□□□□ -2.1
PHF3-202ENST00000393387 KRTAP10-8P60410 259 aa1.91□□□□□ -2.1
PHF3-202ENST00000393387 PCSK5Q92824 1860 aa1.91□□□□□ -2.1
PHF3-202ENST00000393387 CEP290O15078 2479 aa1.9□□□□□ -2.11
PHF3-202ENST00000393387 SPRR1BP22528 89 aa1.89□□□□□ -2.11
PHF3-202ENST00000393387 CREBBPQ92793 2442 aa1.89□□□□□ -2.11
PHF3-202ENST00000393387 HIVEP2P31629 2446 aa1.89□□□□□ -2.11
PHF3-202ENST00000393387 RYR1P21817 5038 aa1.88□□□□□ -2.11
PHF3-202ENST00000393387 WNK1Q9H4A3 2382 aa1.88□□□□□ -2.11
PHF3-202ENST00000393387 CNOT1A5YKK6 2376 aaKnown RBP1.87□□□□□ -2.11
PHF3-202ENST00000393387 P0C880 135 aa1.87□□□□□ -2.11
PHF3-202ENST00000393387 NAV3Q8IVL0 2385 aa1.87□□□□□ -2.11
PHF3-202ENST00000393387 PP632Q6XCG6 107 aa1.87□□□□□ -2.11
PHF3-202ENST00000393387 CR1P17927 2039 aa1.87□□□□□ -2.11
PHF3-202ENST00000393387 KRTAP29-1A8MX34 341 aaPredicted RBP1.87□□□□□ -2.11
PHF3-202ENST00000393387 TNP1P09430 55 aa1.87□□□□□ -2.11
PHF3-202ENST00000393387 CSPG4Q6UVK1 2322 aa1.86□□□□□ -2.11
PHF3-202ENST00000393387 SPTAN1Q13813 2472 aaKnown RBP1.86□□□□□ -2.11
PHF3-202ENST00000393387 PTPRQQ9UMZ3 2332 aa1.85□□□□□ -2.11
PHF3-202ENST00000393387 LTBP2Q14767 1821 aa1.85□□□□□ -2.11
PHF3-202ENST00000393387 PLAC8Q9NZF1 115 aa1.85□□□□□ -2.11
PHF3-202ENST00000393387 COL4A2P08572 1712 aa1.84□□□□□ -2.11
PHF3-202ENST00000393387 SPRR1AP35321 89 aa1.84□□□□□ -2.11
PHF3-202ENST00000393387 LCE6AA0A183 80 aa1.84□□□□□ -2.12
PHF3-202ENST00000393387 PCLOQ9Y6V0 5065 aa1.84□□□□□ -2.12
PHF3-202ENST00000393387 CACNA1HO95180 2353 aa1.84□□□□□ -2.12
PHF3-202ENST00000393387 TNRC18O15417 2968 aaPredicted RBP1.83□□□□□ -2.12
PHF3-202ENST00000393387 MUC22E2RYF6 1773 aaPredicted RBP1.83□□□□□ -2.12
PHF3-202ENST00000393387 H0YAA0 97 aa1.82□□□□□ -2.12
PHF3-202ENST00000393387 A0A1B0GVY2 172 aa1.82□□□□□ -2.12
PHF3-202ENST00000393387 OTOGLQ3ZCN5 2332 aa1.81□□□□□ -2.12
PHF3-202ENST00000393387 ABCA2Q9BZC7 2435 aa1.81□□□□□ -2.12
PHF3-202ENST00000393387 EPPK1P58107 5090 aaKnown RBP1.8□□□□□ -2.12
PHF3-202ENST00000393387 GVINP1Q7Z2Y8 2422 aa1.79□□□□□ -2.12
PHF3-202ENST00000393387 KRTAP10-2P60368 255 aa1.79□□□□□ -2.12
PHF3-202ENST00000393387 KRTAP1-5Q9BYS1 174 aa1.79□□□□□ -2.12
PHF3-202ENST00000393387 KRTAP10-1P60331 282 aa1.79□□□□□ -2.12
PHF3-202ENST00000393387 TTC28Q96AY4 2481 aa1.79□□□□□ -2.12
PHF3-202ENST00000393387 GPR179Q6PRD1 2367 aa1.78□□□□□ -2.12
PHF3-202ENST00000393387 NBASA2RRP1 2371 aa1.77□□□□□ -2.13
PHF3-202ENST00000393387 C2CD3Q4AC94 2353 aa1.77□□□□□ -2.13
PHF3-202ENST00000393387 ZNF462Q96JM2 2506 aa1.77□□□□□ -2.13
PHF3-202ENST00000393387 DOPEY1Q5JWR5 2465 aa1.76□□□□□ -2.13
PHF3-202ENST00000393387 PRO2289Q9P1D8 64 aa1.76□□□□□ -2.13
PHF3-202ENST00000393387 FAM208BQ5VWN6 2430 aa1.76□□□□□ -2.13
PHF3-202ENST00000393387 CCDC168Q8NDH2 2452 aa1.76□□□□□ -2.13
PHF3-202ENST00000393387 ACACBO00763 2458 aa1.76□□□□□ -2.13
PHF3-202ENST00000393387 ANKHD1Q8IWZ3 2542 aaKnown RBP1.76□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms