RNA–Protein interactions for RNA: ENST00000389328.8

TRAPPC9-201, Transcript of trafficking protein particle complex 9, humanhuman

TSL 2 BASIC

Gene TRAPPC9, Length 4,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-201ENST00000389328 IGLV9-49A0A0B4J1Y8 123 aa8.81□□□□□ -1
TRAPPC9-201ENST00000389328 PCOTHQ58A44 107 aa8.81□□□□□ -1
TRAPPC9-201ENST00000389328 H0Y9P7 68 aa8.8□□□□□ -1
TRAPPC9-201ENST00000389328 Q6ZRP5 223 aa8.8□□□□□ -1
TRAPPC9-201ENST00000389328 Q9BRP9 147 aa8.8□□□□□ -1
TRAPPC9-201ENST00000389328 SPINK6Q6UWN8 80 aa8.79□□□□□ -1
TRAPPC9-201ENST00000389328 TNRC18O15417 2968 aaPredicted RBP8.79□□□□□ -1
TRAPPC9-201ENST00000389328 Q8NAQ8 132 aa8.79□□□□□ -1
TRAPPC9-201ENST00000389328 GVQW2A0A096LPI5 108 aaPredicted RBP8.78□□□□□ -1
TRAPPC9-201ENST00000389328 TRBV7-4A0A0J9YYF1 115 aa8.78□□□□□ -1
TRAPPC9-201ENST00000389328 Q8NBF4 154 aa8.78□□□□□ -1
TRAPPC9-201ENST00000389328 ITPR1Q14643 2758 aa8.78□□□□□ -1
TRAPPC9-201ENST00000389328 C14orf177Q52M58 125 aa8.78□□□□□ -1
TRAPPC9-201ENST00000389328 LINC00528Q8N1L1 170 aa8.77□□□□□ -1.01
TRAPPC9-201ENST00000389328 ASH1LQ9NR48 2969 aaKnown RBP8.77□□□□□ -1.01
TRAPPC9-201ENST00000389328 ASPMQ8IZT6 3477 aa8.77□□□□□ -1.01
TRAPPC9-201ENST00000389328 SETXQ7Z333 2677 aaKnown RBP8.76□□□□□ -1.01
TRAPPC9-201ENST00000389328 Q6ZRX8 168 aa8.76□□□□□ -1.01
TRAPPC9-201ENST00000389328 DMXL1Q9Y485 3027 aa8.75□□□□□ -1.01
TRAPPC9-201ENST00000389328 ZFHX4Q86UP3 3567 aa8.75□□□□□ -1.01
TRAPPC9-201ENST00000389328 HELZ2Q9BYK8 2649 aaKnown RBP8.75□□□□□ -1.01
TRAPPC9-201ENST00000389328 TEP1Q99973 2627 aaKnown RBP8.74□□□□□ -1.01
TRAPPC9-201ENST00000389328 K7EQZ3 153 aa8.74□□□□□ -1.01
TRAPPC9-201ENST00000389328 LINC01556Q5JQF7 62 aa8.74□□□□□ -1.01
TRAPPC9-201ENST00000389328 SERTAD4-AS1Q5TG53 156 aa8.74□□□□□ -1.01
TRAPPC9-201ENST00000389328 UNC79Q9P2D8 2635 aa8.73□□□□□ -1.01
TRAPPC9-201ENST00000389328 TEX15Q9BXT5 2789 aa8.73□□□□□ -1.01
TRAPPC9-201ENST00000389328 F8WDY8 70 aa8.73□□□□□ -1.01
TRAPPC9-201ENST00000389328 LINC00476Q8WZB0 136 aa8.73□□□□□ -1.01
TRAPPC9-201ENST00000389328 C1orf64Q8NEQ6 169 aa8.73□□□□□ -1.01
TRAPPC9-201ENST00000389328 hDV103S1A0JD37 113 aa8.72□□□□□ -1.01
TRAPPC9-201ENST00000389328 FAM168BA1KXE4 195 aa8.72□□□□□ -1.01
TRAPPC9-201ENST00000389328 ERC2-IT1O76042 136 aa8.72□□□□□ -1.01
TRAPPC9-201ENST00000389328 PRR34Q9NV39 138 aa8.72□□□□□ -1.01
TRAPPC9-201ENST00000389328 FLNCQ14315 2725 aa8.72□□□□□ -1.01
TRAPPC9-201ENST00000389328 SEC61GP60059 68 aa8.72□□□□□ -1.01
TRAPPC9-201ENST00000389328 LINC00612Q8N6U2 182 aa8.72□□□□□ -1.01
TRAPPC9-201ENST00000389328 RPL37AP61513 92 aaKnown RBP8.71□□□□□ -1.01
TRAPPC9-201ENST00000389328 Q8NDZ9 215 aa8.71□□□□□ -1.02
TRAPPC9-201ENST00000389328 Q8N377 158 aa8.7□□□□□ -1.02
TRAPPC9-201ENST00000389328 IGHV6-1A0A0B4J1U7 121 aa8.7□□□□□ -1.02
TRAPPC9-201ENST00000389328 Q5XG85 94 aa8.7□□□□□ -1.02
TRAPPC9-201ENST00000389328 A0A0G2JQZ4 141 aa8.7□□□□□ -1.02
TRAPPC9-201ENST00000389328 A0A1W2PNN7 141 aa8.7□□□□□ -1.02
TRAPPC9-201ENST00000389328 OXTP01178 125 aa8.69□□□□□ -1.02
TRAPPC9-201ENST00000389328 A0A1B0GW54 56 aa8.68□□□□□ -1.02
TRAPPC9-201ENST00000389328 CR1P17927 2039 aa8.68□□□□□ -1.02
TRAPPC9-201ENST00000389328 A8MUN3 132 aa8.67□□□□□ -1.02
TRAPPC9-201ENST00000389328 C15orf56Q8N910 161 aa8.67□□□□□ -1.02
TRAPPC9-201ENST00000389328 KCNQ1DNQ9H478 68 aa8.67□□□□□ -1.02
TRAPPC9-201ENST00000389328 LIMD2Q9BT23 127 aa8.64□□□□□ -1.03
TRAPPC9-201ENST00000389328 WIPF1O43516 503 aa8.64□□□□□ -1.03
TRAPPC9-201ENST00000389328 H3BNG1 76 aa8.63□□□□□ -1.03
TRAPPC9-201ENST00000389328 KRTAP10-3P60369 221 aa8.62□□□□□ -1.03
TRAPPC9-201ENST00000389328 A0A1W2PNM2 257 aa8.62□□□□□ -1.03
TRAPPC9-201ENST00000389328 ZANQ9Y493 2812 aa8.62□□□□□ -1.03
TRAPPC9-201ENST00000389328 DMDP11532 3685 aa8.62□□□□□ -1.03
TRAPPC9-201ENST00000389328 IGLV1-50A0A075B6I6 118 aa8.61□□□□□ -1.03
TRAPPC9-201ENST00000389328 SPAG11AQ6PDA7 123 aa8.6□□□□□ -1.03
TRAPPC9-201ENST00000389328 OCR1Q9BZK8 76 aa8.6□□□□□ -1.03
TRAPPC9-201ENST00000389328 FP248Q71RG6 208 aaPredicted RBP8.6□□□□□ -1.03
TRAPPC9-201ENST00000389328 MUC3AQ02505 3323 aa8.58□□□□□ -1.04
TRAPPC9-201ENST00000389328 PHF5AQ7RTV0 110 aaKnown RBP8.58□□□□□ -1.04
TRAPPC9-201ENST00000389328 IGSF10Q6WRI0 2623 aa8.58□□□□□ -1.04
TRAPPC9-201ENST00000389328 TRAV22A0A0B4J277 110 aa8.58□□□□□ -1.04
TRAPPC9-201ENST00000389328 LINC00588Q9Y4M8 146 aa8.58□□□□□ -1.04
TRAPPC9-201ENST00000389328 LAMA5O15230 3695 aa8.58□□□□□ -1.04
TRAPPC9-201ENST00000389328 ZNF706Q9Y5V0 76 aaPredicted RBP8.58□□□□□ -1.04
TRAPPC9-201ENST00000389328 UBR5O95071 2799 aaPredicted RBP8.57□□□□□ -1.04
TRAPPC9-201ENST00000389328 IGFL1Q6UW32 110 aa8.57□□□□□ -1.04
TRAPPC9-201ENST00000389328 RETNLBQ9BQ08 111 aa8.57□□□□□ -1.04
TRAPPC9-201ENST00000389328 HRNRQ86YZ3 2850 aaPredicted RBP8.57□□□□□ -1.04
TRAPPC9-201ENST00000389328 KRTAP1-3Q8IUG1 177 aa8.56□□□□□ -1.04
TRAPPC9-201ENST00000389328 CHTF8P0CG12 524 aa8.56□□□□□ -1.04
TRAPPC9-201ENST00000389328 BAHCC1Q9P281 2608 aa8.56□□□□□ -1.04
TRAPPC9-201ENST00000389328 RELNP78509 3460 aa8.56□□□□□ -1.04
TRAPPC9-201ENST00000389328 EPM2AB3EWF7 344 aa8.56□□□□□ -1.04
TRAPPC9-201ENST00000389328 C4orf48Q5BLP8 95 aa8.56□□□□□ -1.04
TRAPPC9-201ENST00000389328 FAM229BQ4G0N7 80 aa8.56□□□□□ -1.04
TRAPPC9-201ENST00000389328 STAB1Q9NY15 2570 aa8.55□□□□□ -1.04
TRAPPC9-201ENST00000389328 CIRBP-AS1Q8TBR5 109 aa8.55□□□□□ -1.04
TRAPPC9-201ENST00000389328 NOTCH1P46531 2555 aa8.55□□□□□ -1.04
TRAPPC9-201ENST00000389328 DNAH10OSP0CZ25 163 aa8.53□□□□□ -1.04
TRAPPC9-201ENST00000389328 IGLV5-48A0A075B6I7 105 aa8.53□□□□□ -1.04
TRAPPC9-201ENST00000389328 SMG1Q96Q15 3661 aaKnown RBP8.53□□□□□ -1.04
TRAPPC9-201ENST00000389328 CSMD1Q96PZ7 3565 aa8.52□□□□□ -1.05
TRAPPC9-201ENST00000389328 CASC10Q5T4H9 136 aa8.52□□□□□ -1.05
TRAPPC9-201ENST00000389328 H3BPC8 53 aa8.52□□□□□ -1.05
TRAPPC9-201ENST00000389328 A8MWP4 228 aa8.5□□□□□ -1.05
TRAPPC9-201ENST00000389328 C16orf90A8MZG2 172 aa8.5□□□□□ -1.05
TRAPPC9-201ENST00000389328 COA5Q86WW8 74 aa8.49□□□□□ -1.05
TRAPPC9-201ENST00000389328 NBEAL1Q6ZS30 2694 aa8.49□□□□□ -1.05
TRAPPC9-201ENST00000389328 UTP20O75691 2785 aaKnown RBP8.48□□□□□ -1.05
TRAPPC9-201ENST00000389328 DSCR10P59022 87 aa8.48□□□□□ -1.05
TRAPPC9-201ENST00000389328 MOBPQ13875 183 aa8.48□□□□□ -1.05
TRAPPC9-201ENST00000389328 PRR15Q8IV56 129 aa8.48□□□□□ -1.05
TRAPPC9-201ENST00000389328 TP53AIP1Q9HCN2 124 aa8.48□□□□□ -1.05
TRAPPC9-201ENST00000389328 COL6A5A8TX70 2615 aa8.47□□□□□ -1.05
TRAPPC9-201ENST00000389328 KRTAP1-1Q07627 177 aa8.47□□□□□ -1.05
TRAPPC9-201ENST00000389328 FBN2P35556 2912 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 115.6 ms