RNA–Protein interactions for RNA: ENST00000381342.6

SNRPB-201, Transcript of small nuclear ribonucleoprotein polypeptides B and B1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SNRPB, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPB-201ENST00000381342 FAM19A1Q7Z5A9 133 aa9.79□□□□□ -0.84
SNRPB-201ENST00000381342 PCP4L1A6NKN8 68 aa9.78□□□□□ -0.84
SNRPB-201ENST00000381342 MT1HL1P0DM35 61 aa9.78□□□□□ -0.84
SNRPB-201ENST00000381342 PRLHP81277 87 aa9.78□□□□□ -0.84
SNRPB-201ENST00000381342 KRTAP13-1Q8IUC0 172 aa9.78□□□□□ -0.84
SNRPB-201ENST00000381342 CTAG1AP78358 180 aa9.77□□□□□ -0.85
SNRPB-201ENST00000381342 S100A7L2Q5SY68 101 aa9.77□□□□□ -0.85
SNRPB-201ENST00000381342 HIST1H4GQ99525 98 aa9.77□□□□□ -0.85
SNRPB-201ENST00000381342 PPDPFQ9H3Y8 114 aa9.77□□□□□ -0.85
SNRPB-201ENST00000381342 KCNQ1DNQ9H478 68 aa9.77□□□□□ -0.85
SNRPB-201ENST00000381342 IGLV6-57P01721 117 aa9.76□□□□□ -0.85
SNRPB-201ENST00000381342 IFITM1P13164 125 aa9.76□□□□□ -0.85
SNRPB-201ENST00000381342 MUSTN1Q8IVN3 82 aa9.76□□□□□ -0.85
SNRPB-201ENST00000381342 COPS9Q8WXC6 57 aa9.75□□□□□ -0.85
SNRPB-201ENST00000381342 SPRR1AP35321 89 aa9.74□□□□□ -0.85
SNRPB-201ENST00000381342 TRAV23DV6A0A075B6W5 121 aa9.73□□□□□ -0.85
SNRPB-201ENST00000381342 M0R143 59 aa9.73□□□□□ -0.85
SNRPB-201ENST00000381342 CEND1Q8N111 149 aa9.73□□□□□ -0.85
SNRPB-201ENST00000381342 LINC00337Q8N6G1 96 aa9.73□□□□□ -0.85
SNRPB-201ENST00000381342 OR13C6PQ8NH95 151 aa9.73□□□□□ -0.85
SNRPB-201ENST00000381342 ETDCA0A1B0GVM5 59 aa9.72□□□□□ -0.85
SNRPB-201ENST00000381342 KRTAP4-16G5E9R7 235 aaPredicted RBP9.72□□□□□ -0.85
SNRPB-201ENST00000381342 KRTAP1-4P0C5Y4 121 aa9.71□□□□□ -0.86
SNRPB-201ENST00000381342 BVES-AS1Q5T3Y7 98 aa9.7□□□□□ -0.86
SNRPB-201ENST00000381342 HIGD2AQ9BW72 106 aa9.7□□□□□ -0.86
SNRPB-201ENST00000381342 TNXBP22105 4242 aa9.7□□□□□ -0.86
SNRPB-201ENST00000381342 HINT1P49773 126 aaPredicted RBP9.69□□□□□ -0.86
SNRPB-201ENST00000381342 TMEM238LA0A1B0GVL6 79 aa9.68□□□□□ -0.86
SNRPB-201ENST00000381342 A6NJY4 79 aa9.68□□□□□ -0.86
SNRPB-201ENST00000381342 B5MCH6 92 aa9.68□□□□□ -0.86
SNRPB-201ENST00000381342 FXYD2P54710 66 aa9.68□□□□□ -0.86
SNRPB-201ENST00000381342 KRTAP10-8P60410 259 aa9.68□□□□□ -0.86
SNRPB-201ENST00000381342 ZNF73O43830 326 aaPredicted RBP9.67□□□□□ -0.86
SNRPB-201ENST00000381342 A4D1N5 150 aa9.66□□□□□ -0.86
SNRPB-201ENST00000381342 PRR26Q8N8Z3 221 aa9.66□□□□□ -0.86
SNRPB-201ENST00000381342 A6NDN8 102 aa9.65□□□□□ -0.86
SNRPB-201ENST00000381342 Q6ZRX8 168 aa9.65□□□□□ -0.86
SNRPB-201ENST00000381342 SMCR5Q8TEV8 140 aa9.65□□□□□ -0.86
SNRPB-201ENST00000381342 SNHG12Q9BXW3 62 aa9.65□□□□□ -0.86
SNRPB-201ENST00000381342 CBY1Q9Y3M2 126 aa9.65□□□□□ -0.86
SNRPB-201ENST00000381342 TRAV13-2A0A0B4J235 113 aa9.63□□□□□ -0.87
SNRPB-201ENST00000381342 A0A1B0GWB2 263 aa9.63□□□□□ -0.87
SNRPB-201ENST00000381342 Q9BRP9 147 aa9.63□□□□□ -0.87
SNRPB-201ENST00000381342 ANAPC11Q9NYG5 84 aa9.63□□□□□ -0.87
SNRPB-201ENST00000381342 BATFQ16520 125 aa9.62□□□□□ -0.87
SNRPB-201ENST00000381342 C6orf99Q4VX62 202 aa9.62□□□□□ -0.87
SNRPB-201ENST00000381342 A0A087X002 238 aa9.61□□□□□ -0.87
SNRPB-201ENST00000381342 A0A0B4J2C4 111 aa9.61□□□□□ -0.87
SNRPB-201ENST00000381342 NHP2Q9NX24 153 aaKnown RBP9.61□□□□□ -0.87
SNRPB-201ENST00000381342 ERC2-IT1O76042 136 aa9.6□□□□□ -0.87
SNRPB-201ENST00000381342 SPRR4Q96PI1 79 aa9.6□□□□□ -0.87
SNRPB-201ENST00000381342 CFC1BP0CG36 223 aa9.59□□□□□ -0.87
SNRPB-201ENST00000381342 CFC1P0CG37 223 aa9.59□□□□□ -0.87
SNRPB-201ENST00000381342 COX7BP24311 80 aa9.58□□□□□ -0.88
SNRPB-201ENST00000381342 RPL13AP40429 203 aaKnown RBP9.58□□□□□ -0.88
SNRPB-201ENST00000381342 SMIM11BQ8TCY0 68 aa9.58□□□□□ -0.88
SNRPB-201ENST00000381342 ZNF706Q9Y5V0 76 aaPredicted RBP9.58□□□□□ -0.88
SNRPB-201ENST00000381342 CRYGAP11844 174 aa9.57□□□□□ -0.88
SNRPB-201ENST00000381342 ELOF1P60002 83 aaKnown RBP9.57□□□□□ -0.88
SNRPB-201ENST00000381342 COL5A1-AS1Q5SY13 56 aa9.57□□□□□ -0.88
SNRPB-201ENST00000381342 RAB37Q96AX2 223 aa9.57□□□□□ -0.88
SNRPB-201ENST00000381342 K7ERJ3 54 aa9.56□□□□□ -0.88
SNRPB-201ENST00000381342 FAM229BQ4G0N7 80 aa9.56□□□□□ -0.88
SNRPB-201ENST00000381342 KRTAP13-2Q52LG2 175 aa9.56□□□□□ -0.88
SNRPB-201ENST00000381342 PRO1854Q9UHT4 67 aa9.56□□□□□ -0.88
SNRPB-201ENST00000381342 HMCN2Q8NDA2 5059 aa9.54□□□□□ -0.88
SNRPB-201ENST00000381342 TRBV7-6A0A0J9YX20 115 aa9.53□□□□□ -0.88
SNRPB-201ENST00000381342 DHRS4-AS1Q9P1J3 65 aa9.53□□□□□ -0.88
SNRPB-201ENST00000381342 GAGE2AQ6NT46 116 aa9.52□□□□□ -0.89
SNRPB-201ENST00000381342 ST20-AS1Q8NBB2 130 aa9.52□□□□□ -0.89
SNRPB-201ENST00000381342 TYMSOSQ8TAI1 123 aa9.52□□□□□ -0.89
SNRPB-201ENST00000381342 C3orf22Q8N5N4 141 aa9.51□□□□□ -0.89
SNRPB-201ENST00000381342 H7C2G1 150 aa9.5□□□□□ -0.89
SNRPB-201ENST00000381342 TAX1BP3O14907 124 aa9.5□□□□□ -0.89
SNRPB-201ENST00000381342 LINC00483Q53H64 154 aa9.5□□□□□ -0.89
SNRPB-201ENST00000381342 TSPAN13O95857 204 aa9.49□□□□□ -0.89
SNRPB-201ENST00000381342 C9orf118A6NHY6 69 aa9.47□□□□□ -0.89
SNRPB-201ENST00000381342 VAMP3Q15836 100 aa9.46□□□□□ -0.9
SNRPB-201ENST00000381342 Q1RN00 199 aa9.46□□□□□ -0.9
SNRPB-201ENST00000381342 IGLV9-49A0A0B4J1Y8 123 aa9.44□□□□□ -0.9
SNRPB-201ENST00000381342 MOBPQ13875 183 aa9.43□□□□□ -0.9
SNRPB-201ENST00000381342 LINC00575Q6W349 94 aa9.43□□□□□ -0.9
SNRPB-201ENST00000381342 H3BUT2 72 aa9.42□□□□□ -0.9
SNRPB-201ENST00000381342 LINC00304Q8N9R0 145 aa9.42□□□□□ -0.9
SNRPB-201ENST00000381342 DEFB105AQ8NG35 78 aa9.42□□□□□ -0.9
SNRPB-201ENST00000381342 TRIAP1O43715 76 aa9.41□□□□□ -0.9
SNRPB-201ENST00000381342 SLC25A20O43772 301 aa9.41□□□□□ -0.9
SNRPB-201ENST00000381342 SPRR1BP22528 89 aa9.41□□□□□ -0.9
SNRPB-201ENST00000381342 A0A1W2PPM0 123 aa9.4□□□□□ -0.9
SNRPB-201ENST00000381342 PSMB2P49721 201 aa9.4□□□□□ -0.9
SNRPB-201ENST00000381342 LYRM7Q5U5X0 104 aa9.4□□□□□ -0.9
SNRPB-201ENST00000381342 NAA38Q9BRA0 125 aaKnown RBP9.4□□□□□ -0.9
SNRPB-201ENST00000381342 COX6CP09669 75 aa9.39□□□□□ -0.91
SNRPB-201ENST00000381342 LINC01547P58512 204 aaPredicted RBP9.39□□□□□ -0.91
SNRPB-201ENST00000381342 PRR4Q16378 134 aa9.39□□□□□ -0.91
SNRPB-201ENST00000381342 C9orf153Q5TBE3 101 aa9.39□□□□□ -0.91
SNRPB-201ENST00000381342 Q8NBF4 154 aa9.39□□□□□ -0.91
SNRPB-201ENST00000381342 IGLV5-48A0A075B6I7 105 aa9.38□□□□□ -0.91
SNRPB-201ENST00000381342 hADV29S1A0JD25 119 aa9.38□□□□□ -0.91
SNRPB-201ENST00000381342 FABP2P12104 132 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms