RNA–Protein interactions for RNA: ENST00000381208.9

RPAIN-202, Transcript of RPA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RPAIN, Length 1,394 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-202ENST00000381208 HERVK_113P61574 105 aa7.71□□□□□ -1.18
RPAIN-202ENST00000381208 PRR4Q16378 134 aa7.71□□□□□ -1.18
RPAIN-202ENST00000381208 RPL37AP8A6NKH3 93 aa7.7□□□□□ -1.18
RPAIN-202ENST00000381208 RPL24P83731 157 aaKnown RBP7.7□□□□□ -1.18
RPAIN-202ENST00000381208 BATFQ16520 125 aa7.7□□□□□ -1.18
RPAIN-202ENST00000381208 TYMSOSQ8TAI1 123 aa7.7□□□□□ -1.18
RPAIN-202ENST00000381208 GAGE10A6NGK3 116 aa7.69□□□□□ -1.18
RPAIN-202ENST00000381208 HIGD1BQ9P298 99 aa7.69□□□□□ -1.18
RPAIN-202ENST00000381208 LPAP08519 4548 aa7.68□□□□□ -1.18
RPAIN-202ENST00000381208 C11orf86A6NJI1 115 aa7.68□□□□□ -1.18
RPAIN-202ENST00000381208 ZNF22P17026 224 aaPredicted RBP7.68□□□□□ -1.18
RPAIN-202ENST00000381208 HSD52Q0P140 79 aa7.68□□□□□ -1.18
RPAIN-202ENST00000381208 FAM229BQ4G0N7 80 aa7.68□□□□□ -1.18
RPAIN-202ENST00000381208 TMEM170BQ5T4T1 132 aa7.68□□□□□ -1.18
RPAIN-202ENST00000381208 ERG28Q9UKR5 140 aa7.68□□□□□ -1.18
RPAIN-202ENST00000381208 A0A087X002 238 aa7.67□□□□□ -1.18
RPAIN-202ENST00000381208 E9PLD3 99 aa7.67□□□□□ -1.18
RPAIN-202ENST00000381208 PFN2P35080 140 aa7.67□□□□□ -1.18
RPAIN-202ENST00000381208 HINT1P49773 126 aaPredicted RBP7.67□□□□□ -1.18
RPAIN-202ENST00000381208 C2orf91Q6ZV80 131 aa7.67□□□□□ -1.18
RPAIN-202ENST00000381208 KRTAP13-1Q8IUC0 172 aa7.67□□□□□ -1.18
RPAIN-202ENST00000381208 A0A1B0GV90 55 aa7.66□□□□□ -1.18
RPAIN-202ENST00000381208 SND1-IT1Q9HBX3 110 aa7.66□□□□□ -1.18
RPAIN-202ENST00000381208 IGKV2-28A0A075B6P5 120 aa7.65□□□□□ -1.18
RPAIN-202ENST00000381208 IGKV2D-26A0A0A0MRZ7 120 aa7.65□□□□□ -1.18
RPAIN-202ENST00000381208 IGKV2D-28P01615 120 aa7.65□□□□□ -1.18
RPAIN-202ENST00000381208 BVES-AS1Q5T3Y7 98 aa7.65□□□□□ -1.18
RPAIN-202ENST00000381208 PCP2Q8IVA1 136 aa7.65□□□□□ -1.18
RPAIN-202ENST00000381208 TSPAN13O95857 204 aa7.64□□□□□ -1.19
RPAIN-202ENST00000381208 VPREB1P12018 145 aa7.64□□□□□ -1.19
RPAIN-202ENST00000381208 TAL2Q16559 108 aa7.64□□□□□ -1.19
RPAIN-202ENST00000381208 MYMXA0A1B0GTQ4 84 aa7.63□□□□□ -1.19
RPAIN-202ENST00000381208 A6NDN8 102 aa7.63□□□□□ -1.19
RPAIN-202ENST00000381208 TMEM126AQ9H061 195 aa7.62□□□□□ -1.19
RPAIN-202ENST00000381208 A0A0U1RQV1 116 aa7.61□□□□□ -1.19
RPAIN-202ENST00000381208 TMEM223A0PJW6 202 aa7.61□□□□□ -1.19
RPAIN-202ENST00000381208 FAM19A1Q7Z5A9 133 aa7.61□□□□□ -1.19
RPAIN-202ENST00000381208 LINC00304Q8N9R0 145 aa7.6□□□□□ -1.19
RPAIN-202ENST00000381208 PLEKHB2Q96CS7 222 aa7.6□□□□□ -1.19
RPAIN-202ENST00000381208 ZNF625Q96I27 306 aaPredicted RBP7.6□□□□□ -1.19
RPAIN-202ENST00000381208 ZNF815PA8K554 130 aa7.59□□□□□ -1.19
RPAIN-202ENST00000381208 LEPROTO15243 131 aa7.59□□□□□ -1.19
RPAIN-202ENST00000381208 LGALS3P17931 250 aaKnown RBP7.59□□□□□ -1.19
RPAIN-202ENST00000381208 LINC00158P58513 81 aa7.59□□□□□ -1.19
RPAIN-202ENST00000381208 PRLHP81277 87 aa7.59□□□□□ -1.19
RPAIN-202ENST00000381208 KRTAP13-2Q52LG2 175 aa7.59□□□□□ -1.19
RPAIN-202ENST00000381208 ANAPC11Q9NYG5 84 aa7.59□□□□□ -1.19
RPAIN-202ENST00000381208 M0R378 163 aa7.59□□□□□ -1.2
RPAIN-202ENST00000381208 SCGB1D4Q6XE38 83 aa7.59□□□□□ -1.2
RPAIN-202ENST00000381208 J3QQQ9 107 aa7.58□□□□□ -1.2
RPAIN-202ENST00000381208 C5orf47Q569G3 176 aa7.58□□□□□ -1.2
RPAIN-202ENST00000381208 CEND1Q8N111 149 aa7.58□□□□□ -1.2
RPAIN-202ENST00000381208 HERV-K104P63124 156 aa7.57□□□□□ -1.2
RPAIN-202ENST00000381208 VAMP3Q15836 100 aa7.57□□□□□ -1.2
RPAIN-202ENST00000381208 HIST1H4GQ99525 98 aa7.57□□□□□ -1.2
RPAIN-202ENST00000381208 TTTY13Q9BZ97 58 aa7.57□□□□□ -1.2
RPAIN-202ENST00000381208 ZNF706Q9Y5V0 76 aaPredicted RBP7.57□□□□□ -1.2
RPAIN-202ENST00000381208 TAX1BP3O14907 124 aa7.56□□□□□ -1.2
RPAIN-202ENST00000381208 SMIM13P0DJ93 91 aa7.55□□□□□ -1.2
RPAIN-202ENST00000381208 SPAG11AQ6PDA7 123 aa7.55□□□□□ -1.2
RPAIN-202ENST00000381208 HIGD2AQ9BW72 106 aa7.55□□□□□ -1.2
RPAIN-202ENST00000381208 SPANXB1Q9NS25 103 aaPredicted RBP7.55□□□□□ -1.2
RPAIN-202ENST00000381208 PRYO14603 147 aa7.54□□□□□ -1.2
RPAIN-202ENST00000381208 MEIG1Q5JSS6 88 aa7.54□□□□□ -1.2
RPAIN-202ENST00000381208 A0A1B0GV72 72 aa7.53□□□□□ -1.2
RPAIN-202ENST00000381208 Q8NDZ9 215 aa7.53□□□□□ -1.2
RPAIN-202ENST00000381208 NDUFA12Q9UI09 145 aa7.53□□□□□ -1.2
RPAIN-202ENST00000381208 A0A0U1RRA0 63 aa7.52□□□□□ -1.21
RPAIN-202ENST00000381208 C9orf118A6NHY6 69 aa7.52□□□□□ -1.21
RPAIN-202ENST00000381208 TSPEAR-AS2P59090 65 aa7.52□□□□□ -1.21
RPAIN-202ENST00000381208 TPRXLQ17RH7 258 aa7.52□□□□□ -1.21
RPAIN-202ENST00000381208 LINC00337Q8N6G1 96 aa7.52□□□□□ -1.21
RPAIN-202ENST00000381208 FXYD2P54710 66 aa7.51□□□□□ -1.21
RPAIN-202ENST00000381208 MIR7-3HGQ8N6C7 128 aa7.51□□□□□ -1.21
RPAIN-202ENST00000381208 SPRR4Q96PI1 79 aa7.51□□□□□ -1.21
RPAIN-202ENST00000381208 IGLV7-46A0A075B6I9 117 aa7.5□□□□□ -1.21
RPAIN-202ENST00000381208 Q6ZVH6 145 aa7.5□□□□□ -1.21
RPAIN-202ENST00000381208 KCNQ1DNQ9H478 68 aa7.5□□□□□ -1.21
RPAIN-202ENST00000381208 NHP2Q9NX24 153 aaKnown RBP7.5□□□□□ -1.21
RPAIN-202ENST00000381208 MUC2Q02817 5179 aa7.5□□□□□ -1.21
RPAIN-202ENST00000381208 A0A1B0GWB2 263 aa7.49□□□□□ -1.21
RPAIN-202ENST00000381208 SPRR1AP35321 89 aa7.49□□□□□ -1.21
RPAIN-202ENST00000381208 UBE2V1Q13404 147 aa7.49□□□□□ -1.21
RPAIN-202ENST00000381208 RETNLBQ9BQ08 111 aa7.49□□□□□ -1.21
RPAIN-202ENST00000381208 ETDCA0A1B0GVM5 59 aa7.48□□□□□ -1.21
RPAIN-202ENST00000381208 TIMM17BO60830 172 aa7.48□□□□□ -1.21
RPAIN-202ENST00000381208 SEC61GP60059 68 aa7.48□□□□□ -1.21
RPAIN-202ENST00000381208 GTF2H5Q6ZYL4 71 aa7.48□□□□□ -1.21
RPAIN-202ENST00000381208 C3orf22Q8N5N4 141 aa7.48□□□□□ -1.21
RPAIN-202ENST00000381208 A0A0J9YXY3 114 aa7.47□□□□□ -1.21
RPAIN-202ENST00000381208 SCGB1A1P11684 91 aa7.47□□□□□ -1.21
RPAIN-202ENST00000381208 FP248Q71RG6 208 aaPredicted RBP7.47□□□□□ -1.21
RPAIN-202ENST00000381208 COPS9Q8WXC6 57 aa7.47□□□□□ -1.21
RPAIN-202ENST00000381208 LOC107984156A0A0G2JMH3 177 aa7.46□□□□□ -1.21
RPAIN-202ENST00000381208 TRBV10-2A0A0K0K1G8 114 aa7.46□□□□□ -1.21
RPAIN-202ENST00000381208 NCR3O14931 201 aa7.46□□□□□ -1.21
RPAIN-202ENST00000381208 FABP2P12104 132 aa7.46□□□□□ -1.21
RPAIN-202ENST00000381208 ARL17AQ8IVW1 177 aa7.46□□□□□ -1.21
RPAIN-202ENST00000381208 MTURNQ8N3F0 131 aa7.46□□□□□ -1.21
RPAIN-202ENST00000381208 RAB37Q96AX2 223 aa7.46□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms