RNA–Protein interactions for RNA: ENST00000378244.6

DEPDC4-202, Transcript of DEP domain containing 4, humanhuman

TSL 2

Gene DEPDC4, Length 2,337 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-202ENST00000378244 UBE2AP49459 152 aa7.13□□□□□ -1.27
DEPDC4-202ENST00000378244 FAM19A1Q7Z5A9 133 aa7.13□□□□□ -1.27
DEPDC4-202ENST00000378244 SMIM6P0DI80 62 aa7.13□□□□□ -1.27
DEPDC4-202ENST00000378244 TRBV10-2A0A0K0K1G8 114 aa7.12□□□□□ -1.27
DEPDC4-202ENST00000378244 ZNF861PO60384 105 aa7.12□□□□□ -1.27
DEPDC4-202ENST00000378244 SLC25A34Q6PIV7 304 aa7.12□□□□□ -1.27
DEPDC4-202ENST00000378244 Q6ZVH6 145 aa7.12□□□□□ -1.27
DEPDC4-202ENST00000378244 HIST1H4GQ99525 98 aa7.12□□□□□ -1.27
DEPDC4-202ENST00000378244 DLEU1O43261 78 aa7.11□□□□□ -1.27
DEPDC4-202ENST00000378244 IFITM1P13164 125 aa7.11□□□□□ -1.27
DEPDC4-202ENST00000378244 RPL28P46779 137 aaKnown RBP7.11□□□□□ -1.27
DEPDC4-202ENST00000378244 LINC00337Q8N6G1 96 aa7.11□□□□□ -1.27
DEPDC4-202ENST00000378244 DIRC1Q969H9 104 aa7.11□□□□□ -1.27
DEPDC4-202ENST00000378244 KCNQ1DNQ9H478 68 aa7.11□□□□□ -1.27
DEPDC4-202ENST00000378244 IGLV6-57P01721 117 aa7.1□□□□□ -1.27
DEPDC4-202ENST00000378244 COPS9Q8WXC6 57 aa7.1□□□□□ -1.27
DEPDC4-202ENST00000378244 A6NDN8 102 aa7.1□□□□□ -1.27
DEPDC4-202ENST00000378244 H0Y9J4 135 aa7.1□□□□□ -1.27
DEPDC4-202ENST00000378244 HIGD2AQ9BW72 106 aa7.1□□□□□ -1.27
DEPDC4-202ENST00000378244 A0A0A0MQY5 61 aa7.09□□□□□ -1.27
DEPDC4-202ENST00000378244 PRYO14603 147 aa7.09□□□□□ -1.27
DEPDC4-202ENST00000378244 TRAV23DV6A0A075B6W5 121 aa7.09□□□□□ -1.28
DEPDC4-202ENST00000378244 ETDCA0A1B0GVM5 59 aa7.09□□□□□ -1.28
DEPDC4-202ENST00000378244 SCGB1A1P11684 91 aa7.09□□□□□ -1.28
DEPDC4-202ENST00000378244 C2orf91Q6ZV80 131 aa7.08□□□□□ -1.28
DEPDC4-202ENST00000378244 KRTAP13-1Q8IUC0 172 aa7.07□□□□□ -1.28
DEPDC4-202ENST00000378244 ZNF73O43830 326 aaPredicted RBP7.06□□□□□ -1.28
DEPDC4-202ENST00000378244 SPRR1AP35321 89 aa7.06□□□□□ -1.28
DEPDC4-202ENST00000378244 KRTAP4-16G5E9R7 235 aaPredicted RBP7.06□□□□□ -1.28
DEPDC4-202ENST00000378244 H3BS24 57 aa7.06□□□□□ -1.28
DEPDC4-202ENST00000378244 UBE2V1Q13404 147 aa7.06□□□□□ -1.28
DEPDC4-202ENST00000378244 ANAPC11Q9NYG5 84 aa7.06□□□□□ -1.28
DEPDC4-202ENST00000378244 KRTAP29-1A8MX34 341 aaPredicted RBP7.05□□□□□ -1.28
DEPDC4-202ENST00000378244 TSTD3H0UI37 97 aa7.05□□□□□ -1.28
DEPDC4-202ENST00000378244 PRO1933Q9H354 126 aa7.05□□□□□ -1.28
DEPDC4-202ENST00000378244 HIGD1BQ9P298 99 aa7.05□□□□□ -1.28
DEPDC4-202ENST00000378244 OXTP01178 125 aa7.04□□□□□ -1.28
DEPDC4-202ENST00000378244 B5MCH6 92 aa7.04□□□□□ -1.28
DEPDC4-202ENST00000378244 C6orf99Q4VX62 202 aa7.04□□□□□ -1.28
DEPDC4-202ENST00000378244 LINC01600Q96MT4 127 aa7.04□□□□□ -1.28
DEPDC4-202ENST00000378244 PPDPFQ9H3Y8 114 aa7.04□□□□□ -1.28
DEPDC4-202ENST00000378244 HERC1Q15751 4861 aa7.03□□□□□ -1.28
DEPDC4-202ENST00000378244 KRTAP1-4P0C5Y4 121 aa7.03□□□□□ -1.28
DEPDC4-202ENST00000378244 SMIM20Q8N5G0 67 aa7.03□□□□□ -1.28
DEPDC4-202ENST00000378244 PRR26Q8N8Z3 221 aa7.03□□□□□ -1.28
DEPDC4-202ENST00000378244 FAT3Q8TDW7 4589 aa7.03□□□□□ -1.28
DEPDC4-202ENST00000378244 TRAV13-2A0A0B4J235 113 aa7.02□□□□□ -1.28
DEPDC4-202ENST00000378244 HINT1P49773 126 aaPredicted RBP7.02□□□□□ -1.28
DEPDC4-202ENST00000378244 Q6ZRX8 168 aa7.02□□□□□ -1.28
DEPDC4-202ENST00000378244 UQCR10Q9UDW1 63 aa7.02□□□□□ -1.28
DEPDC4-202ENST00000378244 MTURNQ8N3F0 131 aa7.02□□□□□ -1.29
DEPDC4-202ENST00000378244 SMCR5Q8TEV8 140 aa7.01□□□□□ -1.29
DEPDC4-202ENST00000378244 VPS25Q9BRG1 176 aa7.01□□□□□ -1.29
DEPDC4-202ENST00000378244 Q9BRP9 147 aa7.01□□□□□ -1.29
DEPDC4-202ENST00000378244 H7C2G1 150 aa7.01□□□□□ -1.29
DEPDC4-202ENST00000378244 ERC2-IT1O76042 136 aa7.01□□□□□ -1.29
DEPDC4-202ENST00000378244 MT1HL1P0DM35 61 aa7.01□□□□□ -1.29
DEPDC4-202ENST00000378244 PKHD1L1Q86WI1 4243 aa7.01□□□□□ -1.29
DEPDC4-202ENST00000378244 CEND1Q8N111 149 aa7□□□□□ -1.29
DEPDC4-202ENST00000378244 SMIM11BQ8TCY0 68 aa7□□□□□ -1.29
DEPDC4-202ENST00000378244 FXYD2P54710 66 aa7□□□□□ -1.29
DEPDC4-202ENST00000378244 CFC1BP0CG36 223 aa6.99□□□□□ -1.29
DEPDC4-202ENST00000378244 CFC1P0CG37 223 aa6.99□□□□□ -1.29
DEPDC4-202ENST00000378244 RPL13AP40429 203 aaKnown RBP6.99□□□□□ -1.29
DEPDC4-202ENST00000378244 A0A087X002 238 aa6.99□□□□□ -1.29
DEPDC4-202ENST00000378244 TAL2Q16559 108 aa6.99□□□□□ -1.29
DEPDC4-202ENST00000378244 RAB37Q96AX2 223 aa6.98□□□□□ -1.29
DEPDC4-202ENST00000378244 COX7BP24311 80 aa6.98□□□□□ -1.29
DEPDC4-202ENST00000378244 SS18L2Q9UHA2 77 aa6.98□□□□□ -1.29
DEPDC4-202ENST00000378244 GAGE2AQ6NT46 116 aa6.97□□□□□ -1.29
DEPDC4-202ENST00000378244 ELOF1P60002 83 aaKnown RBP6.96□□□□□ -1.29
DEPDC4-202ENST00000378244 KRTAP10-8P60410 259 aa6.96□□□□□ -1.29
DEPDC4-202ENST00000378244 HSD52Q0P140 79 aa6.96□□□□□ -1.29
DEPDC4-202ENST00000378244 SPRR4Q96PI1 79 aa6.96□□□□□ -1.29
DEPDC4-202ENST00000378244 ST20-AS1Q8NBB2 130 aa6.96□□□□□ -1.3
DEPDC4-202ENST00000378244 CRYGAP11844 174 aa6.95□□□□□ -1.3
DEPDC4-202ENST00000378244 NHP2Q9NX24 153 aaKnown RBP6.95□□□□□ -1.3
DEPDC4-202ENST00000378244 K7ERJ3 54 aa6.94□□□□□ -1.3
DEPDC4-202ENST00000378244 Q1RN00 199 aa6.94□□□□□ -1.3
DEPDC4-202ENST00000378244 ZNF706Q9Y5V0 76 aaPredicted RBP6.94□□□□□ -1.3
DEPDC4-202ENST00000378244 A0A0B4J2C4 111 aa6.93□□□□□ -1.3
DEPDC4-202ENST00000378244 A0A1B0GWB2 263 aa6.93□□□□□ -1.3
DEPDC4-202ENST00000378244 DHRS4-AS1Q9P1J3 65 aa6.93□□□□□ -1.3
DEPDC4-202ENST00000378244 KRTAP13-2Q52LG2 175 aa6.93□□□□□ -1.3
DEPDC4-202ENST00000378244 DEFB105AQ8NG35 78 aa6.93□□□□□ -1.3
DEPDC4-202ENST00000378244 TYMSOSQ8TAI1 123 aa6.93□□□□□ -1.3
DEPDC4-202ENST00000378244 PRO1854Q9UHT4 67 aa6.93□□□□□ -1.3
DEPDC4-202ENST00000378244 TNXBP22105 4242 aa6.92□□□□□ -1.3
DEPDC4-202ENST00000378244 TRBV7-6A0A0J9YX20 115 aa6.92□□□□□ -1.3
DEPDC4-202ENST00000378244 C3orf22Q8N5N4 141 aa6.92□□□□□ -1.3
DEPDC4-202ENST00000378244 BVES-AS1Q5T3Y7 98 aa6.9□□□□□ -1.3
DEPDC4-202ENST00000378244 IGLV9-49A0A0B4J1Y8 123 aa6.9□□□□□ -1.31
DEPDC4-202ENST00000378244 FAM229BQ4G0N7 80 aa6.9□□□□□ -1.31
DEPDC4-202ENST00000378244 C4orf26Q17RF5 130 aa6.89□□□□□ -1.31
DEPDC4-202ENST00000378244 SLC25A20O43772 301 aa6.89□□□□□ -1.31
DEPDC4-202ENST00000378244 LINC00483Q53H64 154 aa6.88□□□□□ -1.31
DEPDC4-202ENST00000378244 LINC00575Q6W349 94 aa6.88□□□□□ -1.31
DEPDC4-202ENST00000378244 SIGMAR1Q99720 223 aa6.88□□□□□ -1.31
DEPDC4-202ENST00000378244 hADV29S1A0JD25 119 aa6.86□□□□□ -1.31
DEPDC4-202ENST00000378244 PSMB2P49721 201 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms