RNA–Protein interactions for RNA: ENST00000377342.9

CBWD3-202, Transcript of COBW domain containing 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CBWD3, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-202ENST00000377342 PCP4L1A6NKN8 68 aa13.11□□□□□ -0.31
CBWD3-202ENST00000377342 RPL37AP61513 92 aaKnown RBP13.1□□□□□ -0.31
CBWD3-202ENST00000377342 KRTAP4-16G5E9R7 235 aaPredicted RBP13.09□□□□□ -0.31
CBWD3-202ENST00000377342 C1orf137Q5JT78 98 aa13.09□□□□□ -0.31
CBWD3-202ENST00000377342 PRO1854Q9UHT4 67 aa13.08□□□□□ -0.31
CBWD3-202ENST00000377342 ZNF73O43830 326 aaPredicted RBP13.08□□□□□ -0.32
CBWD3-202ENST00000377342 SMIM11BQ8TCY0 68 aa13.08□□□□□ -0.32
CBWD3-202ENST00000377342 BCE1O60756 84 aa13.07□□□□□ -0.32
CBWD3-202ENST00000377342 Q5VSD8 79 aa13.07□□□□□ -0.32
CBWD3-202ENST00000377342 Q8N1X5 172 aa13.06□□□□□ -0.32
CBWD3-202ENST00000377342 SRRM2Q9UQ35 2752 aaKnown RBP13.06□□□□□ -0.32
CBWD3-202ENST00000377342 BATFQ16520 125 aa13.05□□□□□ -0.32
CBWD3-202ENST00000377342 H7C2G1 150 aa13.05□□□□□ -0.32
CBWD3-202ENST00000377342 HERC2O95714 4834 aa13.04□□□□□ -0.32
CBWD3-202ENST00000377342 C6orf99Q4VX62 202 aa13.04□□□□□ -0.32
CBWD3-202ENST00000377342 KRTAP13-1Q8IUC0 172 aa13.04□□□□□ -0.32
CBWD3-202ENST00000377342 CBY1Q9Y3M2 126 aa13.04□□□□□ -0.32
CBWD3-202ENST00000377342 FAM229AH3BQW9 127 aa13.03□□□□□ -0.32
CBWD3-202ENST00000377342 DIRC1Q969H9 104 aa13.03□□□□□ -0.32
CBWD3-202ENST00000377342 SNHG12Q9BXW3 62 aa13.03□□□□□ -0.32
CBWD3-202ENST00000377342 IGLV7-43P04211 117 aa13.02□□□□□ -0.32
CBWD3-202ENST00000377342 PRLHP81277 87 aa13.02□□□□□ -0.32
CBWD3-202ENST00000377342 FAM19A1Q7Z5A9 133 aa13.02□□□□□ -0.33
CBWD3-202ENST00000377342 B5MCH6 92 aa13.01□□□□□ -0.33
CBWD3-202ENST00000377342 RPL28P46779 137 aaKnown RBP13.01□□□□□ -0.33
CBWD3-202ENST00000377342 ETDCA0A1B0GVM5 59 aa13□□□□□ -0.33
CBWD3-202ENST00000377342 TSPAN13O95857 204 aa13□□□□□ -0.33
CBWD3-202ENST00000377342 PKHD1L1Q86WI1 4243 aa13□□□□□ -0.33
CBWD3-202ENST00000377342 PLA2G1BP04054 148 aaKnown RBP12.99□□□□□ -0.33
CBWD3-202ENST00000377342 Q1RN00 199 aa12.99□□□□□ -0.33
CBWD3-202ENST00000377342 Q6ZRX8 168 aa12.99□□□□□ -0.33
CBWD3-202ENST00000377342 UBE2AP49459 152 aa12.98□□□□□ -0.33
CBWD3-202ENST00000377342 ELOF1P60002 83 aaKnown RBP12.97□□□□□ -0.33
CBWD3-202ENST00000377342 H0Y9J4 135 aa12.96□□□□□ -0.33
CBWD3-202ENST00000377342 TRBV7-6A0A0J9YX20 115 aa12.96□□□□□ -0.34
CBWD3-202ENST00000377342 ZNF861PO60384 105 aa12.96□□□□□ -0.34
CBWD3-202ENST00000377342 Q9BRP9 147 aa12.96□□□□□ -0.34
CBWD3-202ENST00000377342 TRIAP1O43715 76 aa12.95□□□□□ -0.34
CBWD3-202ENST00000377342 COX7BP24311 80 aa12.95□□□□□ -0.34
CBWD3-202ENST00000377342 KRTAP4-5Q9BYR2 181 aa12.94□□□□□ -0.34
CBWD3-202ENST00000377342 SMCR5Q8TEV8 140 aa12.93□□□□□ -0.34
CBWD3-202ENST00000377342 HIGD2AQ9BW72 106 aa12.91□□□□□ -0.34
CBWD3-202ENST00000377342 NAA38Q9BRA0 125 aaKnown RBP12.9□□□□□ -0.34
CBWD3-202ENST00000377342 TAX1BP3O14907 124 aa12.89□□□□□ -0.35
CBWD3-202ENST00000377342 ERC2-IT1O76042 136 aa12.88□□□□□ -0.35
CBWD3-202ENST00000377342 PSMB2P49721 201 aa12.88□□□□□ -0.35
CBWD3-202ENST00000377342 VAMP3Q15836 100 aa12.87□□□□□ -0.35
CBWD3-202ENST00000377342 SPINK6Q6UWN8 80 aa12.87□□□□□ -0.35
CBWD3-202ENST00000377342 FAM218AQ96MZ4 157 aa12.86□□□□□ -0.35
CBWD3-202ENST00000377342 COL5A1-AS1Q5SY13 56 aa12.85□□□□□ -0.35
CBWD3-202ENST00000377342 LINC00575Q6W349 94 aa12.85□□□□□ -0.35
CBWD3-202ENST00000377342 DHRS4-AS1Q9P1J3 65 aa12.85□□□□□ -0.35
CBWD3-202ENST00000377342 H0YGX0 51 aa12.83□□□□□ -0.36
CBWD3-202ENST00000377342 INAFM2P0DMQ5 153 aa12.83□□□□□ -0.36
CBWD3-202ENST00000377342 CLEC2BQ92478 149 aa12.83□□□□□ -0.36
CBWD3-202ENST00000377342 C9orf118A6NHY6 69 aa12.82□□□□□ -0.36
CBWD3-202ENST00000377342 H3BUT2 72 aa12.81□□□□□ -0.36
CBWD3-202ENST00000377342 FLG2Q5D862 2391 aaPredicted RBP12.81□□□□□ -0.36
CBWD3-202ENST00000377342 ABCA13Q86UQ4 5058 aa12.8□□□□□ -0.36
CBWD3-202ENST00000377342 COX6CP09669 75 aa12.8□□□□□ -0.36
CBWD3-202ENST00000377342 ST20-AS1Q8NBB2 130 aa12.79□□□□□ -0.36
CBWD3-202ENST00000377342 hADV29S1A0JD25 119 aa12.78□□□□□ -0.36
CBWD3-202ENST00000377342 KRTAP1-4P0C5Y4 121 aa12.77□□□□□ -0.36
CBWD3-202ENST00000377342 SLC25A20O43772 301 aa12.77□□□□□ -0.37
CBWD3-202ENST00000377342 SPRR4Q96PI1 79 aa12.77□□□□□ -0.37
CBWD3-202ENST00000377342 SCGB1C2P0DMR2 95 aa12.76□□□□□ -0.37
CBWD3-202ENST00000377342 A0A1W2PPM0 123 aa12.74□□□□□ -0.37
CBWD3-202ENST00000377342 MYCBP2O75592 4640 aa12.74□□□□□ -0.37
CBWD3-202ENST00000377342 LST1O00453 97 aa12.73□□□□□ -0.37
CBWD3-202ENST00000377342 Q6ZQY7 126 aa12.73□□□□□ -0.37
CBWD3-202ENST00000377342 A0A1B0GX51 115 aa12.73□□□□□ -0.37
CBWD3-202ENST00000377342 TCL1BO95988 128 aa12.73□□□□□ -0.37
CBWD3-202ENST00000377342 LINC01547P58512 204 aaPredicted RBP12.73□□□□□ -0.37
CBWD3-202ENST00000377342 LRP1Q07954 4544 aaKnown RBP12.73□□□□□ -0.37
CBWD3-202ENST00000377342 ZNF706Q9Y5V0 76 aaPredicted RBP12.72□□□□□ -0.37
CBWD3-202ENST00000377342 ANAPC11Q9NYG5 84 aa12.71□□□□□ -0.37
CBWD3-202ENST00000377342 IGLV5-48A0A075B6I7 105 aa12.7□□□□□ -0.38
CBWD3-202ENST00000377342 LINC00483Q53H64 154 aa12.7□□□□□ -0.38
CBWD3-202ENST00000377342 FAT3Q8TDW7 4589 aa12.7□□□□□ -0.38
CBWD3-202ENST00000377342 LYRM7Q5U5X0 104 aa12.7□□□□□ -0.38
CBWD3-202ENST00000377342 GAGE2AQ6NT46 116 aa12.7□□□□□ -0.38
CBWD3-202ENST00000377342 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.7□□□□□ -0.38
CBWD3-202ENST00000377342 TRACP01848 142 aa12.67□□□□□ -0.38
CBWD3-202ENST00000377342 FABP2P12104 132 aa12.67□□□□□ -0.38
CBWD3-202ENST00000377342 SPRR1BP22528 89 aa12.67□□□□□ -0.38
CBWD3-202ENST00000377342 DEFB105AQ8NG35 78 aa12.67□□□□□ -0.38
CBWD3-202ENST00000377342 A0A087X002 238 aa12.66□□□□□ -0.38
CBWD3-202ENST00000377342 ATXN8Q156A1 80 aa12.65□□□□□ -0.38
CBWD3-202ENST00000377342 Q8N377 158 aa12.65□□□□□ -0.38
CBWD3-202ENST00000377342 SNCGO76070 127 aa12.64□□□□□ -0.39
CBWD3-202ENST00000377342 TRBV20-1A0A075B6N2 111 aa12.64□□□□□ -0.39
CBWD3-202ENST00000377342 DNAL4O96015 105 aa12.64□□□□□ -0.39
CBWD3-202ENST00000377342 FAM229BQ4G0N7 80 aa12.64□□□□□ -0.39
CBWD3-202ENST00000377342 TEX49A0A1B0GTD5 131 aa12.63□□□□□ -0.39
CBWD3-202ENST00000377342 SMIM29Q86T20 159 aa12.61□□□□□ -0.39
CBWD3-202ENST00000377342 SPCS1Q9Y6A9 102 aa12.61□□□□□ -0.39
CBWD3-202ENST00000377342 C3orf22Q8N5N4 141 aa12.61□□□□□ -0.39
CBWD3-202ENST00000377342 LINC01600Q96MT4 127 aa12.61□□□□□ -0.39
CBWD3-202ENST00000377342 KRTAP13-2Q52LG2 175 aa12.6□□□□□ -0.39
CBWD3-202ENST00000377342 PRR26Q8N8Z3 221 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms