RNA–Protein interactions for RNA: ENST00000376893.7

SSX3-202, Transcript of SSX family member 3, humanhuman

TSL 2 BASIC

Gene SSX3, Length 800 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3-202ENST00000376893 IFI27P40305 119 aaPredicted RBP3.5□□□□□ -1.85
SSX3-202ENST00000376893 HIST1H2BDP58876 126 aa3.5□□□□□ -1.85
SSX3-202ENST00000376893 HIST1H2BCP62807 126 aa3.5□□□□□ -1.85
SSX3-202ENST00000376893 NDUFA5Q16718 116 aa3.5□□□□□ -1.85
SSX3-202ENST00000376893 HIST2H2BEQ16778 126 aa3.5□□□□□ -1.85
SSX3-202ENST00000376893 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.5□□□□□ -1.85
SSX3-202ENST00000376893 Q6ZSA8 131 aa3.5□□□□□ -1.85
SSX3-202ENST00000376893 HIST1H2BHQ93079 126 aa3.5□□□□□ -1.85
SSX3-202ENST00000376893 HIST1H2BNQ99877 126 aa3.5□□□□□ -1.85
SSX3-202ENST00000376893 HIST1H2BMQ99879 126 aa3.5□□□□□ -1.85
SSX3-202ENST00000376893 LAMTOR3Q9UHA4 124 aa3.5□□□□□ -1.85
SSX3-202ENST00000376893 LAMTOR2Q9Y2Q5 125 aa3.5□□□□□ -1.85
SSX3-202ENST00000376893 INAFM2P0DMQ5 153 aa3.49□□□□□ -1.85
SSX3-202ENST00000376893 CNBPP62633 177 aaKnown RBP3.49□□□□□ -1.85
SSX3-202ENST00000376893 HIST1H4AP62805 103 aaKnown RBP3.49□□□□□ -1.85
SSX3-202ENST00000376893 Q8N8P6 123 aa3.49□□□□□ -1.85
SSX3-202ENST00000376893 OR10D4PQ8NGN7 298 aa3.49□□□□□ -1.85
SSX3-202ENST00000376893 HERC1Q15751 4861 aa3.49□□□□□ -1.85
SSX3-202ENST00000376893 PKHD1L1Q86WI1 4243 aa3.49□□□□□ -1.85
SSX3-202ENST00000376893 MT-ND6P03923 174 aa3.48□□□□□ -1.85
SSX3-202ENST00000376893 SPAG11BQ08648 103 aa3.48□□□□□ -1.85
SSX3-202ENST00000376893 SS18Q15532 418 aa3.48□□□□□ -1.85
SSX3-202ENST00000376893 PMCHL1Q16048 86 aa3.48□□□□□ -1.85
SSX3-202ENST00000376893 LYRM7Q5U5X0 104 aa3.48□□□□□ -1.85
SSX3-202ENST00000376893 C5orf38Q86SI9 138 aa3.48□□□□□ -1.85
SSX3-202ENST00000376893 TIMM21Q9BVV7 248 aa3.48□□□□□ -1.85
SSX3-202ENST00000376893 NXT2Q9NPJ8 142 aaKnown RBP3.48□□□□□ -1.85
SSX3-202ENST00000376893 IGHV1-58A0A0C4DH39 117 aa3.47□□□□□ -1.85
SSX3-202ENST00000376893 IGKV2-24A0A0C4DH68 120 aa3.47□□□□□ -1.85
SSX3-202ENST00000376893 RPS28P62857 69 aaKnown RBP3.47□□□□□ -1.85
SSX3-202ENST00000376893 MRPS36P82909 103 aaKnown RBP3.47□□□□□ -1.85
SSX3-202ENST00000376893 SPINT4Q6UDR6 99 aa3.47□□□□□ -1.85
SSX3-202ENST00000376893 C18orf32Q8TCD1 76 aa3.47□□□□□ -1.85
SSX3-202ENST00000376893 SMCR5Q8TEV8 140 aa3.47□□□□□ -1.85
SSX3-202ENST00000376893 TMEM141Q96I45 108 aa3.47□□□□□ -1.85
SSX3-202ENST00000376893 CARD19Q96LW7 228 aa3.47□□□□□ -1.85
SSX3-202ENST00000376893 FAT3Q8TDW7 4589 aa3.46□□□□□ -1.85
SSX3-202ENST00000376893 IGHV3-64A0A075B6Q5 118 aa3.46□□□□□ -1.86
SSX3-202ENST00000376893 A0A096LNI7 61 aa3.46□□□□□ -1.86
SSX3-202ENST00000376893 IGIPA6NJ69 53 aa3.46□□□□□ -1.86
SSX3-202ENST00000376893 C1orf196B1AJZ1 125 aa3.46□□□□□ -1.86
SSX3-202ENST00000376893 UBE2D1P51668 147 aa3.46□□□□□ -1.86
SSX3-202ENST00000376893 COX6A2Q02221 97 aa3.46□□□□□ -1.86
SSX3-202ENST00000376893 C9orf163Q8N9P6 203 aa3.46□□□□□ -1.86
SSX3-202ENST00000376893 SPACA4Q8TDM5 124 aa3.46□□□□□ -1.86
SSX3-202ENST00000376893 A0A1B0GU33 70 aa3.45□□□□□ -1.86
SSX3-202ENST00000376893 LINC01546A6NGU7 62 aa3.45□□□□□ -1.86
SSX3-202ENST00000376893 LCE1FQ5T754 118 aa3.45□□□□□ -1.86
SSX3-202ENST00000376893 LCA10Q71F78 164 aa3.45□□□□□ -1.86
SSX3-202ENST00000376893 AMELXQ99217 191 aa3.45□□□□□ -1.86
SSX3-202ENST00000376893 C2orf88Q9BSF0 95 aa3.45□□□□□ -1.86
SSX3-202ENST00000376893 SMCO4Q9NRQ5 59 aa3.45□□□□□ -1.86
SSX3-202ENST00000376893 LRP1Q07954 4544 aaKnown RBP3.44□□□□□ -1.86
SSX3-202ENST00000376893 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.44□□□□□ -1.86
SSX3-202ENST00000376893 KRTAP10-4P60372 401 aaPredicted RBP3.44□□□□□ -1.86
SSX3-202ENST00000376893 CIRBPQ14011 172 aaKnown RBP3.44□□□□□ -1.86
SSX3-202ENST00000376893 C2orf82Q6UX34 121 aa3.44□□□□□ -1.86
SSX3-202ENST00000376893 KTN1-AS1Q86SY8 53 aa3.44□□□□□ -1.86
SSX3-202ENST00000376893 SCGB3A1Q96QR1 104 aa3.44□□□□□ -1.86
SSX3-202ENST00000376893 C6orf48Q9UBA6 75 aa3.44□□□□□ -1.86
SSX3-202ENST00000376893 TP73-AS1Q9UF72 201 aa3.44□□□□□ -1.86
SSX3-202ENST00000376893 HMCN2Q8NDA2 5059 aa3.43□□□□□ -1.86
SSX3-202ENST00000376893 A8MU10 97 aa3.43□□□□□ -1.86
SSX3-202ENST00000376893 K7EMI3 77 aa3.43□□□□□ -1.86
SSX3-202ENST00000376893 LEPROTO15243 131 aa3.43□□□□□ -1.86
SSX3-202ENST00000376893 HBDP02042 147 aa3.43□□□□□ -1.86
SSX3-202ENST00000376893 TRGC2P03986 189 aa3.43□□□□□ -1.86
SSX3-202ENST00000376893 KRTAP2-2Q9BYT5 123 aa3.43□□□□□ -1.86
SSX3-202ENST00000376893 CDKN2A-AS1Q9UH64 79 aa3.43□□□□□ -1.86
SSX3-202ENST00000376893 SPINK8P0C7L1 97 aa3.42□□□□□ -1.86
SSX3-202ENST00000376893 NDUFA6P56556 154 aa3.42□□□□□ -1.86
SSX3-202ENST00000376893 RPL37AP61513 92 aaKnown RBP3.42□□□□□ -1.86
SSX3-202ENST00000376893 UNQ6190/PRO20217Q6UXQ8 127 aa3.42□□□□□ -1.86
SSX3-202ENST00000376893 CST9LQ9H4G1 147 aa3.42□□□□□ -1.86
SSX3-202ENST00000376893 TOMM7Q9P0U1 55 aa3.42□□□□□ -1.86
SSX3-202ENST00000376893 SRRM2Q9UQ35 2752 aaKnown RBP3.42□□□□□ -1.86
SSX3-202ENST00000376893 COLCA2A8K830 154 aa3.41□□□□□ -1.86
SSX3-202ENST00000376893 NDUFA1O15239 70 aa3.41□□□□□ -1.86
SSX3-202ENST00000376893 ZNF73O43830 326 aaPredicted RBP3.41□□□□□ -1.86
SSX3-202ENST00000376893 IGLC3P0DOY3 106 aa3.41□□□□□ -1.86
SSX3-202ENST00000376893 C9orf116Q5BN46 136 aaPredicted RBP3.41□□□□□ -1.86
SSX3-202ENST00000376893 FAM19A2Q8N3H0 131 aa3.41□□□□□ -1.86
SSX3-202ENST00000376893 LOC107984640A0A0U1RRK4 108 aa3.4□□□□□ -1.87
SSX3-202ENST00000376893 A0A1B0GX51 115 aa3.4□□□□□ -1.87
SSX3-202ENST00000376893 C11orf86A6NJI1 115 aa3.4□□□□□ -1.87
SSX3-202ENST00000376893 H3BPC8 53 aa3.4□□□□□ -1.87
SSX3-202ENST00000376893 ZNF22P17026 224 aaPredicted RBP3.4□□□□□ -1.87
SSX3-202ENST00000376893 BAGE3Q86Y29 109 aa3.4□□□□□ -1.87
SSX3-202ENST00000376893 MIEN1Q9BRT3 115 aa3.4□□□□□ -1.87
SSX3-202ENST00000376893 MRPL35Q9NZE8 188 aaKnown RBP3.4□□□□□ -1.87
SSX3-202ENST00000376893 PLAC8Q9NZF1 115 aa3.4□□□□□ -1.87
SSX3-202ENST00000376893 A0A1W2PNN7 141 aa3.39□□□□□ -1.87
SSX3-202ENST00000376893 NUPR1O60356 82 aa3.39□□□□□ -1.87
SSX3-202ENST00000376893 Q8IZM0 81 aa3.39□□□□□ -1.87
SSX3-202ENST00000376893 CHCHD1Q96BP2 118 aaKnown RBP3.39□□□□□ -1.87
SSX3-202ENST00000376893 DPH3Q96FX2 82 aa3.39□□□□□ -1.87
SSX3-202ENST00000376893 CKS1BP61024 79 aa3.38□□□□□ -1.87
SSX3-202ENST00000376893 LINC01554Q52M75 96 aa3.38□□□□□ -1.87
SSX3-202ENST00000376893 C2orf91Q6ZV80 131 aa3.38□□□□□ -1.87
SSX3-202ENST00000376893 PHF5AQ7RTV0 110 aaKnown RBP3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 150.7 ms