RNA–Protein interactions for RNA: ENST00000376806.9

HLA-A-202, Transcript of major histocompatibility complex, class I, A, humanhuman

BASIC

Gene HLA-A, Length 1,854 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-202ENST00000376806 LRCOL1A6NCL2 159 aa10.78□□□□□ -0.68
HLA-A-202ENST00000376806 A0A096LNI7 61 aa10.77□□□□□ -0.69
HLA-A-202ENST00000376806 GAGE2AQ6NT46 116 aa10.77□□□□□ -0.69
HLA-A-202ENST00000376806 C16orf90A8MZG2 172 aa10.76□□□□□ -0.69
HLA-A-202ENST00000376806 JMJD7-PLA2G4BH0Y9G9 81 aa10.76□□□□□ -0.69
HLA-A-202ENST00000376806 PRYO14603 147 aa10.76□□□□□ -0.69
HLA-A-202ENST00000376806 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.76□□□□□ -0.69
HLA-A-202ENST00000376806 IGLV1-50A0A075B6I6 118 aa10.76□□□□□ -0.69
HLA-A-202ENST00000376806 RPL37AP8A6NKH3 93 aa10.75□□□□□ -0.69
HLA-A-202ENST00000376806 H3BQ85 93 aa10.75□□□□□ -0.69
HLA-A-202ENST00000376806 MRPL55Q7Z7F7 128 aaKnown RBP10.75□□□□□ -0.69
HLA-A-202ENST00000376806 M0R2N4 97 aa10.74□□□□□ -0.69
HLA-A-202ENST00000376806 SCGB1A1P11684 91 aa10.74□□□□□ -0.69
HLA-A-202ENST00000376806 IGKV2-24A0A0C4DH68 120 aa10.73□□□□□ -0.69
HLA-A-202ENST00000376806 SPRR1AP35321 89 aa10.72□□□□□ -0.69
HLA-A-202ENST00000376806 KRTAP4-16G5E9R7 235 aaPredicted RBP10.71□□□□□ -0.69
HLA-A-202ENST00000376806 C3orf84H3BNL1 204 aa10.71□□□□□ -0.69
HLA-A-202ENST00000376806 SMCR5Q8TEV8 140 aa10.7□□□□□ -0.7
HLA-A-202ENST00000376806 LAMTOR3Q9UHA4 124 aa10.7□□□□□ -0.7
HLA-A-202ENST00000376806 GHRHP01286 108 aa10.7□□□□□ -0.7
HLA-A-202ENST00000376806 C21orf62-AS1Q17RA5 79 aa10.7□□□□□ -0.7
HLA-A-202ENST00000376806 Q6ZRX8 168 aa10.7□□□□□ -0.7
HLA-A-202ENST00000376806 C9orf163Q8N9P6 203 aa10.7□□□□□ -0.7
HLA-A-202ENST00000376806 SDIM1Q6ZPB5 146 aa10.69□□□□□ -0.7
HLA-A-202ENST00000376806 ETDCA0A1B0GVM5 59 aa10.68□□□□□ -0.7
HLA-A-202ENST00000376806 B5MCH6 92 aa10.68□□□□□ -0.7
HLA-A-202ENST00000376806 CCKP06307 115 aa10.68□□□□□ -0.7
HLA-A-202ENST00000376806 Q6ZR54 194 aa10.68□□□□□ -0.7
HLA-A-202ENST00000376806 PKIGQ9Y2B9 76 aa10.68□□□□□ -0.7
HLA-A-202ENST00000376806 A0A1W2PNN7 141 aa10.68□□□□□ -0.7
HLA-A-202ENST00000376806 RBM3P98179 157 aaKnown RBP10.67□□□□□ -0.7
HLA-A-202ENST00000376806 CHTF8P0CG12 524 aa10.66□□□□□ -0.7
HLA-A-202ENST00000376806 DHRS4-AS1Q9P1J3 65 aa10.66□□□□□ -0.7
HLA-A-202ENST00000376806 REG3GQ6UW15 175 aa10.65□□□□□ -0.7
HLA-A-202ENST00000376806 Q9BRP9 147 aa10.65□□□□□ -0.7
HLA-A-202ENST00000376806 A0A087WTM6 91 aa10.64□□□□□ -0.71
HLA-A-202ENST00000376806 LOC110117498A0A087WWA1 95 aa10.64□□□□□ -0.71
HLA-A-202ENST00000376806 LINC00643Q86TS7 51 aa10.64□□□□□ -0.71
HLA-A-202ENST00000376806 Q6ZQT0 140 aa10.64□□□□□ -0.71
HLA-A-202ENST00000376806 LINC00846Q9NV44 126 aa10.63□□□□□ -0.71
HLA-A-202ENST00000376806 NDUFV3P56181 108 aaKnown RBP10.62□□□□□ -0.71
HLA-A-202ENST00000376806 Q6Q795 121 aa10.61□□□□□ -0.71
HLA-A-202ENST00000376806 DSCR8Q96T75 97 aa10.61□□□□□ -0.71
HLA-A-202ENST00000376806 TRBV7-7A0A0K0K1E9 115 aa10.6□□□□□ -0.71
HLA-A-202ENST00000376806 KMT2AQ03164 3969 aa10.6□□□□□ -0.71
HLA-A-202ENST00000376806 LINC00474Q9P2X8 69 aa10.59□□□□□ -0.71
HLA-A-202ENST00000376806 DNAH6Q9C0G6 4158 aa10.59□□□□□ -0.71
HLA-A-202ENST00000376806 LY6G6CO95867 125 aa10.59□□□□□ -0.71
HLA-A-202ENST00000376806 LINC01547P58512 204 aaPredicted RBP10.59□□□□□ -0.71
HLA-A-202ENST00000376806 PHF5AQ7RTV0 110 aaKnown RBP10.59□□□□□ -0.71
HLA-A-202ENST00000376806 TRBV7-4A0A0J9YYF1 115 aa10.58□□□□□ -0.72
HLA-A-202ENST00000376806 PDE6GP18545 87 aa10.58□□□□□ -0.72
HLA-A-202ENST00000376806 UBE2BP63146 152 aa10.58□□□□□ -0.72
HLA-A-202ENST00000376806 LINC00476Q8WZB0 136 aa10.58□□□□□ -0.72
HLA-A-202ENST00000376806 Q8N377 158 aa10.57□□□□□ -0.72
HLA-A-202ENST00000376806 DEFB105AQ8NG35 78 aa10.57□□□□□ -0.72
HLA-A-202ENST00000376806 PANO1I0J062 215 aa10.57□□□□□ -0.72
HLA-A-202ENST00000376806 C1orf134Q5TEV5 83 aa10.57□□□□□ -0.72
HLA-A-202ENST00000376806 ERC2-IT1O76042 136 aa10.55□□□□□ -0.72
HLA-A-202ENST00000376806 ALMS1Q8TCU4 4167 aa10.55□□□□□ -0.72
HLA-A-202ENST00000376806 IGLV5-48A0A075B6I7 105 aa10.55□□□□□ -0.72
HLA-A-202ENST00000376806 Q6JHZ5 121 aa10.55□□□□□ -0.72
HLA-A-202ENST00000376806 FAM19A1Q7Z5A9 133 aa10.55□□□□□ -0.72
HLA-A-202ENST00000376806 ST20-AS1Q8NBB2 130 aa10.55□□□□□ -0.72
HLA-A-202ENST00000376806 SACSQ9NZJ4 4579 aa10.54□□□□□ -0.72
HLA-A-202ENST00000376806 RTL8CO15255 209 aa10.54□□□□□ -0.72
HLA-A-202ENST00000376806 KRTAP11-1Q8IUC1 163 aa10.54□□□□□ -0.72
HLA-A-202ENST00000376806 SPACA4Q8TDM5 124 aa10.54□□□□□ -0.72
HLA-A-202ENST00000376806 IMUPQ9GZP8 106 aa10.54□□□□□ -0.72
HLA-A-202ENST00000376806 KMT2CQ8NEZ4 4911 aaKnown RBP10.54□□□□□ -0.72
HLA-A-202ENST00000376806 HYDINQ4G0P3 5121 aa10.53□□□□□ -0.72
HLA-A-202ENST00000376806 PRLHP81277 87 aa10.53□□□□□ -0.72
HLA-A-202ENST00000376806 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.53□□□□□ -0.72
HLA-A-202ENST00000376806 DNAH2Q9P225 4427 aa10.52□□□□□ -0.72
HLA-A-202ENST00000376806 DNAH17Q9UFH2 4485 aa10.51□□□□□ -0.73
HLA-A-202ENST00000376806 FUSP35637 526 aaKnown RBP eCLIP10.51□□□□□ -0.73
HLA-A-202ENST00000376806 HECTD4Q9Y4D8 3996 aa10.51□□□□□ -0.73
HLA-A-202ENST00000376806 C3orf22Q8N5N4 141 aa10.5□□□□□ -0.73
HLA-A-202ENST00000376806 UBL5Q9BZL1 73 aa10.49□□□□□ -0.73
HLA-A-202ENST00000376806 IGKV3D-7A0A0C4DH55 119 aa10.49□□□□□ -0.73
HLA-A-202ENST00000376806 EPM2AB3EWF7 344 aa10.49□□□□□ -0.73
HLA-A-202ENST00000376806 DPH3Q96FX2 82 aa10.48□□□□□ -0.73
HLA-A-202ENST00000376806 LCE6AA0A183 80 aa10.47□□□□□ -0.73
HLA-A-202ENST00000376806 TNP2Q05952 138 aa10.47□□□□□ -0.73
HLA-A-202ENST00000376806 H0Y9J4 135 aa10.47□□□□□ -0.73
HLA-A-202ENST00000376806 ATP5EP2Q5VTU8 51 aa10.47□□□□□ -0.73
HLA-A-202ENST00000376806 HIGD2AQ9BW72 106 aa10.47□□□□□ -0.73
HLA-A-202ENST00000376806 IGLV5-52A0A0A0MRZ9 124 aa10.46□□□□□ -0.74
HLA-A-202ENST00000376806 UBE2AP49459 152 aa10.43□□□□□ -0.74
HLA-A-202ENST00000376806 Q6ZVQ6 151 aa10.43□□□□□ -0.74
HLA-A-202ENST00000376806 ANAPC13Q9BS18 74 aa10.43□□□□□ -0.74
HLA-A-202ENST00000376806 FAM236AA0A1B0GUQ0 79 aa10.42□□□□□ -0.74
HLA-A-202ENST00000376806 FAM236BA0A1B0GV22 79 aa10.42□□□□□ -0.74
HLA-A-202ENST00000376806 BCE1O60756 84 aa10.42□□□□□ -0.74
HLA-A-202ENST00000376806 SMIM29Q86T20 159 aa10.42□□□□□ -0.74
HLA-A-202ENST00000376806 RYR2Q92736 4967 aa10.41□□□□□ -0.74
HLA-A-202ENST00000376806 C1orf137Q5JT78 98 aa10.4□□□□□ -0.74
HLA-A-202ENST00000376806 FRAS1Q86XX4 4008 aa10.4□□□□□ -0.74
HLA-A-202ENST00000376806 KRTAP13-1Q8IUC0 172 aa10.4□□□□□ -0.75
HLA-A-202ENST00000376806 PLAC8Q9NZF1 115 aa10.4□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 106.1 ms