RNA–Protein interactions for RNA: ENST00000373484.4

SYNC-201, Transcript of syncoilin, intermediate filament protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SYNC, Length 1,824 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNC-201ENST00000373484 IGKV3D-7A0A0C4DH55 119 aa13.5□□□□□ -0.25
SYNC-201ENST00000373484 USP17L23D6RBM5 183 aa13.5□□□□□ -0.25
SYNC-201ENST00000373484 ENHOQ6UWT2 76 aa13.5□□□□□ -0.25
SYNC-201ENST00000373484 DNAH11Q96DT5 4516 aa13.5□□□□□ -0.25
SYNC-201ENST00000373484 CFAP161Q6P656 301 aa13.5□□□□□ -0.25
SYNC-201ENST00000373484 PRR34Q9NV39 138 aa13.5□□□□□ -0.25
SYNC-201ENST00000373484 BCE1O60756 84 aa13.49□□□□□ -0.25
SYNC-201ENST00000373484 hADV29S1A0JD25 119 aa13.48□□□□□ -0.25
SYNC-201ENST00000373484 SLPIP03973 132 aa13.48□□□□□ -0.25
SYNC-201ENST00000373484 LINC00269Q8N2A0 174 aa13.48□□□□□ -0.25
SYNC-201ENST00000373484 PSCAO43653 123 aa13.47□□□□□ -0.25
SYNC-201ENST00000373484 RMI2Q96E14 147 aa13.47□□□□□ -0.25
SYNC-201ENST00000373484 REG3AQ06141 175 aa13.46□□□□□ -0.26
SYNC-201ENST00000373484 CLPSL2Q6UWE3 100 aa13.46□□□□□ -0.26
SYNC-201ENST00000373484 IGKV2D-24A0A075B6R9 120 aa13.45□□□□□ -0.26
SYNC-201ENST00000373484 PKHD1P08F94 4074 aa13.45□□□□□ -0.26
SYNC-201ENST00000373484 A0A087WTM6 91 aa13.43□□□□□ -0.26
SYNC-201ENST00000373484 LOC110117498A0A087WWA1 95 aa13.43□□□□□ -0.26
SYNC-201ENST00000373484 NDUFC2-KCTD14E9PQ53 114 aa13.43□□□□□ -0.26
SYNC-201ENST00000373484 C1orf43Q9BWL3 253 aa13.43□□□□□ -0.26
SYNC-201ENST00000373484 UBL5Q9BZL1 73 aa13.43□□□□□ -0.26
SYNC-201ENST00000373484 LINC00575Q6W349 94 aa13.43□□□□□ -0.26
SYNC-201ENST00000373484 CHCHD10Q8WYQ3 142 aaPredicted RBP13.43□□□□□ -0.26
SYNC-201ENST00000373484 LRCOL1A6NCL2 159 aa13.42□□□□□ -0.26
SYNC-201ENST00000373484 PDE6GP18545 87 aa13.42□□□□□ -0.26
SYNC-201ENST00000373484 ZNF561-AS1K7EIQ3 104 aa13.41□□□□□ -0.26
SYNC-201ENST00000373484 A0A087WVE0 104 aa13.39□□□□□ -0.27
SYNC-201ENST00000373484 C6orf99Q4VX62 202 aa13.38□□□□□ -0.27
SYNC-201ENST00000373484 KRTAP26-1Q6PEX3 210 aa13.38□□□□□ -0.27
SYNC-201ENST00000373484 IGLV10-54A0A075B6I4 117 aa13.37□□□□□ -0.27
SYNC-201ENST00000373484 RBM3P98179 157 aaKnown RBP13.37□□□□□ -0.27
SYNC-201ENST00000373484 GHRHP01286 108 aa13.36□□□□□ -0.27
SYNC-201ENST00000373484 KRTAP10-2P60368 255 aa13.36□□□□□ -0.27
SYNC-201ENST00000373484 Q6ZQT0 140 aa13.36□□□□□ -0.27
SYNC-201ENST00000373484 GVQW2A0A096LPI5 108 aaPredicted RBP13.36□□□□□ -0.27
SYNC-201ENST00000373484 PRR3P79522 188 aaKnown RBP13.36□□□□□ -0.27
SYNC-201ENST00000373484 DYNC1H1Q14204 4646 aaKnown RBP13.35□□□□□ -0.27
SYNC-201ENST00000373484 IGLV6-57P01721 117 aa13.35□□□□□ -0.27
SYNC-201ENST00000373484 BIRC6Q9NR09 4857 aa13.35□□□□□ -0.27
SYNC-201ENST00000373484 DNAH5Q8TE73 4624 aa13.35□□□□□ -0.27
SYNC-201ENST00000373484 DPH3Q96FX2 82 aa13.34□□□□□ -0.27
SYNC-201ENST00000373484 FAM19A5Q7Z5A7 132 aaPredicted RBP13.32□□□□□ -0.28
SYNC-201ENST00000373484 CYSTM1Q9H1C7 97 aa13.31□□□□□ -0.28
SYNC-201ENST00000373484 LOC107984640A0A0U1RRK4 108 aa13.3□□□□□ -0.28
SYNC-201ENST00000373484 TRBV7-6A0A0J9YX20 115 aa13.29□□□□□ -0.28
SYNC-201ENST00000373484 SPAG11BQ08648 103 aa13.29□□□□□ -0.28
SYNC-201ENST00000373484 C16orf90A8MZG2 172 aa13.29□□□□□ -0.28
SYNC-201ENST00000373484 FUSP35637 526 aaKnown RBP eCLIP13.29□□□□□ -0.28
SYNC-201ENST00000373484 CXCL6P80162 114 aa13.28□□□□□ -0.28
SYNC-201ENST00000373484 Q8NDZ9 215 aa13.28□□□□□ -0.28
SYNC-201ENST00000373484 C5orf47Q569G3 176 aa13.27□□□□□ -0.28
SYNC-201ENST00000373484 C9orf116Q5BN46 136 aaPredicted RBP13.27□□□□□ -0.28
SYNC-201ENST00000373484 DSCR8Q96T75 97 aa13.27□□□□□ -0.28
SYNC-201ENST00000373484 TRAV7A0A075B6U4 112 aa13.27□□□□□ -0.29
SYNC-201ENST00000373484 FAM19A1Q7Z5A9 133 aa13.27□□□□□ -0.29
SYNC-201ENST00000373484 C14orf177Q52M58 125 aa13.26□□□□□ -0.29
SYNC-201ENST00000373484 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP13.26□□□□□ -0.29
SYNC-201ENST00000373484 LRP1BQ9NZR2 4599 aa13.26□□□□□ -0.29
SYNC-201ENST00000373484 LAMTOR3Q9UHA4 124 aa13.25□□□□□ -0.29
SYNC-201ENST00000373484 TRAV23DV6A0A075B6W5 121 aa13.25□□□□□ -0.29
SYNC-201ENST00000373484 UNQ6190/PRO20217Q6UXQ8 127 aa13.25□□□□□ -0.29
SYNC-201ENST00000373484 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.24□□□□□ -0.29
SYNC-201ENST00000373484 IGLV5-52A0A0A0MRZ9 124 aa13.23□□□□□ -0.29
SYNC-201ENST00000373484 LINC01547P58512 204 aaPredicted RBP13.23□□□□□ -0.29
SYNC-201ENST00000373484 DIRC1Q969H9 104 aa13.23□□□□□ -0.29
SYNC-201ENST00000373484 C10orf25Q5T742 122 aa13.22□□□□□ -0.29
SYNC-201ENST00000373484 Q6ZVQ6 151 aa13.21□□□□□ -0.29
SYNC-201ENST00000373484 C15orf56Q8N910 161 aa13.2□□□□□ -0.3
SYNC-201ENST00000373484 TRBV7-4A0A0J9YYF1 115 aa13.2□□□□□ -0.3
SYNC-201ENST00000373484 Q6ZQY7 126 aa13.2□□□□□ -0.3
SYNC-201ENST00000373484 KLKP1Q107X0 134 aa13.17□□□□□ -0.3
SYNC-201ENST00000373484 COX7BP24311 80 aa13.16□□□□□ -0.3
SYNC-201ENST00000373484 ELOF1P60002 83 aaKnown RBP13.16□□□□□ -0.3
SYNC-201ENST00000373484 KRTAP10-1P60331 282 aa13.16□□□□□ -0.3
SYNC-201ENST00000373484 ZNF73O43830 326 aaPredicted RBP13.15□□□□□ -0.3
SYNC-201ENST00000373484 EPM2AB3EWF7 344 aa13.14□□□□□ -0.31
SYNC-201ENST00000373484 C20orf197Q8N268 126 aa13.14□□□□□ -0.31
SYNC-201ENST00000373484 C6orf48Q9UBA6 75 aa13.14□□□□□ -0.31
SYNC-201ENST00000373484 HIGD2BQ4VC39 106 aa13.13□□□□□ -0.31
SYNC-201ENST00000373484 KIAA1109Q2LD37 5005 aa13.13□□□□□ -0.31
SYNC-201ENST00000373484 APOBP04114 4563 aaKnown RBP13.13□□□□□ -0.31
SYNC-201ENST00000373484 FAM236DA0A1B0GTK5 79 aa13.13□□□□□ -0.31
SYNC-201ENST00000373484 F8WDY8 70 aa13.13□□□□□ -0.31
SYNC-201ENST00000373484 FAM236CP0DP71 79 aa13.13□□□□□ -0.31
SYNC-201ENST00000373484 CNBPP62633 177 aaKnown RBP13.13□□□□□ -0.31
SYNC-201ENST00000373484 HAMPP81172 84 aa13.12□□□□□ -0.31
SYNC-201ENST00000373484 NDUFC1O43677 76 aa13.11□□□□□ -0.31
SYNC-201ENST00000373484 DNAH8Q96JB1 4490 aa13.11□□□□□ -0.31
SYNC-201ENST00000373484 M0R378 163 aa13.11□□□□□ -0.31
SYNC-201ENST00000373484 SERP1Q9Y6X1 66 aa13.11□□□□□ -0.31
SYNC-201ENST00000373484 H7BZZ5 65 aa13.1□□□□□ -0.31
SYNC-201ENST00000373484 OXTP01178 125 aa13.1□□□□□ -0.31
SYNC-201ENST00000373484 CDK2AP2O75956 126 aa13.09□□□□□ -0.31
SYNC-201ENST00000373484 VPREB1P12018 145 aa13.09□□□□□ -0.31
SYNC-201ENST00000373484 C9orf163Q8N9P6 203 aa13.09□□□□□ -0.31
SYNC-201ENST00000373484 RYR1P21817 5038 aa13.08□□□□□ -0.32
SYNC-201ENST00000373484 ERC2-IT1O76042 136 aa13.07□□□□□ -0.32
SYNC-201ENST00000373484 ATP5EP56381 51 aaPredicted RBP13.05□□□□□ -0.32
SYNC-201ENST00000373484 HSPG2P98160 4391 aa13.05□□□□□ -0.32
SYNC-201ENST00000373484 Q5XG85 94 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms