RNA–Protein interactions for RNA: ENST00000372755.7

VCL-202, Transcript of vinculin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCL, Length 6,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-202ENST00000372755 LINC00336Q6ZUF6 198 aa7.51□□□□□ -1.21
VCL-202ENST00000372755 CDC42SE1Q9NRR8 79 aa7.51□□□□□ -1.21
VCL-202ENST00000372755 EIF4EBP3O60516 100 aaPredicted RBP7.5□□□□□ -1.21
VCL-202ENST00000372755 SPRR4Q96PI1 79 aa7.5□□□□□ -1.21
VCL-202ENST00000372755 FAM104AQ969W3 186 aa7.49□□□□□ -1.21
VCL-202ENST00000372755 SPANXA2-OT1Q8N9U9 137 aa7.48□□□□□ -1.21
VCL-202ENST00000372755 FN1P02751 2386 aaKnown RBP7.48□□□□□ -1.21
VCL-202ENST00000372755 A0A0G2JQZ4 141 aa7.48□□□□□ -1.21
VCL-202ENST00000372755 A0A1W2PNN7 141 aa7.48□□□□□ -1.21
VCL-202ENST00000372755 SMR3BP02814 79 aaPredicted RBP7.48□□□□□ -1.21
VCL-202ENST00000372755 H7BZZ5 65 aa7.48□□□□□ -1.21
VCL-202ENST00000372755 PSORS1C2Q9UIG4 136 aa7.47□□□□□ -1.21
VCL-202ENST00000372755 GIG44P09565 113 aaPredicted RBP7.47□□□□□ -1.21
VCL-202ENST00000372755 CNBPP62633 177 aaKnown RBP7.47□□□□□ -1.21
VCL-202ENST00000372755 ANAPC11Q9NYG5 84 aa7.47□□□□□ -1.21
VCL-202ENST00000372755 CD164Q04900 197 aa7.46□□□□□ -1.21
VCL-202ENST00000372755 KTN1-AS1Q86SY8 53 aa7.46□□□□□ -1.22
VCL-202ENST00000372755 LCA10Q71F78 164 aa7.46□□□□□ -1.22
VCL-202ENST00000372755 LINC01554Q52M75 96 aa7.45□□□□□ -1.22
VCL-202ENST00000372755 ZNF575Q86XF7 245 aa7.45□□□□□ -1.22
VCL-202ENST00000372755 IGLV5-48A0A075B6I7 105 aa7.44□□□□□ -1.22
VCL-202ENST00000372755 ZFYVE26Q68DK2 2539 aa7.44□□□□□ -1.22
VCL-202ENST00000372755 USP9XQ93008 2570 aaPredicted RBP7.44□□□□□ -1.22
VCL-202ENST00000372755 A0A0D9SG42 100 aa7.44□□□□□ -1.22
VCL-202ENST00000372755 KRTAP10-3P60369 221 aa7.44□□□□□ -1.22
VCL-202ENST00000372755 A0A1W2PNM2 257 aa7.43□□□□□ -1.22
VCL-202ENST00000372755 A0A096LNT2 108 aa7.42□□□□□ -1.22
VCL-202ENST00000372755 Q8N1X5 172 aa7.42□□□□□ -1.22
VCL-202ENST00000372755 CASC10Q5T4H9 136 aa7.38□□□□□ -1.23
VCL-202ENST00000372755 TLN2Q9Y4G6 2542 aa7.38□□□□□ -1.23
VCL-202ENST00000372755 LUZP6Q538Z0 58 aa7.37□□□□□ -1.23
VCL-202ENST00000372755 Q6ZSA8 131 aa7.35□□□□□ -1.23
VCL-202ENST00000372755 PKD1L2Q7Z442 2459 aa7.33□□□□□ -1.24
VCL-202ENST00000372755 Q1T7F1 81 aa7.32□□□□□ -1.24
VCL-202ENST00000372755 ZNF462Q96JM2 2506 aa7.32□□□□□ -1.24
VCL-202ENST00000372755 PCSK5Q92824 1860 aa7.31□□□□□ -1.24
VCL-202ENST00000372755 LINC00483Q53H64 154 aa7.3□□□□□ -1.24
VCL-202ENST00000372755 PRR26Q8N8Z3 221 aa7.3□□□□□ -1.24
VCL-202ENST00000372755 CAMK2N1Q7Z7J9 78 aa7.3□□□□□ -1.24
VCL-202ENST00000372755 F8P00451 2351 aa7.29□□□□□ -1.24
VCL-202ENST00000372755 SETD2Q9BYW2 2564 aaPredicted RBP7.29□□□□□ -1.24
VCL-202ENST00000372755 USP9YO00507 2555 aaPredicted RBP7.29□□□□□ -1.24
VCL-202ENST00000372755 OCR1Q9BZK8 76 aa7.29□□□□□ -1.24
VCL-202ENST00000372755 IGLV7-46A0A075B6I9 117 aa7.28□□□□□ -1.24
VCL-202ENST00000372755 ANKRD11Q6UB99 2663 aaPredicted RBP7.28□□□□□ -1.24
VCL-202ENST00000372755 A0A1B0GU33 70 aa7.28□□□□□ -1.24
VCL-202ENST00000372755 FAM229BQ4G0N7 80 aa7.25□□□□□ -1.25
VCL-202ENST00000372755 TNP2Q05952 138 aa7.25□□□□□ -1.25
VCL-202ENST00000372755 HRES1P13985 223 aa7.24□□□□□ -1.25
VCL-202ENST00000372755 CEP295Q9C0D2 2601 aa7.23□□□□□ -1.25
VCL-202ENST00000372755 KRTAP1-3Q8IUG1 177 aa7.23□□□□□ -1.25
VCL-202ENST00000372755 ANKRD17O75179 2603 aaKnown RBP7.21□□□□□ -1.25
VCL-202ENST00000372755 M0R2T5 61 aa7.21□□□□□ -1.26
VCL-202ENST00000372755 Q75L30 129 aa7.21□□□□□ -1.26
VCL-202ENST00000372755 MTORP42345 2549 aa7.2□□□□□ -1.26
VCL-202ENST00000372755 KRTAP1-1Q07627 177 aa7.2□□□□□ -1.26
VCL-202ENST00000372755 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.2□□□□□ -1.26
VCL-202ENST00000372755 ZCCHC13Q8WW36 166 aaKnown RBP7.19□□□□□ -1.26
VCL-202ENST00000372755 CHD8Q9HCK8 2581 aa7.19□□□□□ -1.26
VCL-202ENST00000372755 CSAG1Q6PB30 78 aa7.18□□□□□ -1.26
VCL-202ENST00000372755 DMAC1Q96GE9 116 aa7.18□□□□□ -1.26
VCL-202ENST00000372755 S4R3F8 94 aa7.17□□□□□ -1.26
VCL-202ENST00000372755 LINC01558Q9Y6Z2 57 aa7.16□□□□□ -1.26
VCL-202ENST00000372755 MMP24-AS1A0A0U1RRL7 71 aa7.16□□□□□ -1.26
VCL-202ENST00000372755 PLAC8Q9NZF1 115 aa7.15□□□□□ -1.26
VCL-202ENST00000372755 WDR87Q6ZQQ6 2873 aa7.12□□□□□ -1.27
VCL-202ENST00000372755 POLQO75417 2590 aa7.11□□□□□ -1.27
VCL-202ENST00000372755 Q8N9P0 234 aaPredicted RBP7.1□□□□□ -1.27
VCL-202ENST00000372755 ACANP16112 2415 aa7.09□□□□□ -1.27
VCL-202ENST00000372755 SPTBN4Q9H254 2564 aa7.09□□□□□ -1.27
VCL-202ENST00000372755 SPRR1AP35321 89 aa7.09□□□□□ -1.27
VCL-202ENST00000372755 WIPF1O43516 503 aa7.08□□□□□ -1.28
VCL-202ENST00000372755 Q5W150 140 aa7.08□□□□□ -1.28
VCL-202ENST00000372755 SPRR1BP22528 89 aa7.07□□□□□ -1.28
VCL-202ENST00000372755 A0A0A0MQY5 61 aa7.05□□□□□ -1.28
VCL-202ENST00000372755 R4GN34 69 aa7.05□□□□□ -1.28
VCL-202ENST00000372755 SEC61BP60468 96 aaKnown RBP7.04□□□□□ -1.28
VCL-202ENST00000372755 SPINK7P58062 85 aa7.03□□□□□ -1.28
VCL-202ENST00000372755 LINC00472Q9H8W2 130 aa7.03□□□□□ -1.28
VCL-202ENST00000372755 FASNP49327 2511 aaKnown RBP7.02□□□□□ -1.29
VCL-202ENST00000372755 CR1P17927 2039 aa7□□□□□ -1.29
VCL-202ENST00000372755 Q5XG85 94 aa6.99□□□□□ -1.29
VCL-202ENST00000372755 PRAC1Q96KF2 57 aa6.99□□□□□ -1.29
VCL-202ENST00000372755 Q8NDZ9 215 aa6.99□□□□□ -1.29
VCL-202ENST00000372755 Q5VV11 94 aa6.99□□□□□ -1.29
VCL-202ENST00000372755 RPL37P61927 97 aaKnown RBP6.96□□□□□ -1.3
VCL-202ENST00000372755 FP248Q71RG6 208 aaPredicted RBP6.96□□□□□ -1.3
VCL-202ENST00000372755 ROMO1P60602 79 aa6.94□□□□□ -1.3
VCL-202ENST00000372755 Q5VSD8 79 aa6.94□□□□□ -1.3
VCL-202ENST00000372755 KRTAP26-1Q6PEX3 210 aa6.92□□□□□ -1.3
VCL-202ENST00000372755 M0QZ58 72 aa6.9□□□□□ -1.3
VCL-202ENST00000372755 H1FX-AS1Q4G0G2 97 aa6.9□□□□□ -1.3
VCL-202ENST00000372755 EP400Q96L91 3159 aa6.9□□□□□ -1.3
VCL-202ENST00000372755 CYSTM1Q9H1C7 97 aa6.89□□□□□ -1.31
VCL-202ENST00000372755 H3BS24 57 aa6.88□□□□□ -1.31
VCL-202ENST00000372755 KRTAP1-5Q9BYS1 174 aa6.87□□□□□ -1.31
VCL-202ENST00000372755 LCE6AA0A183 80 aa6.86□□□□□ -1.31
VCL-202ENST00000372755 KRTAP10-1P60331 282 aa6.86□□□□□ -1.31
VCL-202ENST00000372755 PLAC4Q8WY50 150 aa6.85□□□□□ -1.31
VCL-202ENST00000372755 MGAM2Q2M2H8 2515 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms