RNA–Protein interactions for RNA: ENST00000372459.6

CTSA-203, Transcript of cathepsin A, humanhuman

TSL 1 (best) BASIC

Gene CTSA, Length 1,972 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-203ENST00000372459 TMEM256-PLSCR3K7ERE1 68 aa16.12■□□□□ 0.17
CTSA-203ENST00000372459 ELOF1P60002 83 aaKnown RBP16.11■□□□□ 0.17
CTSA-203ENST00000372459 C7orf33Q8WU49 177 aa16.11■□□□□ 0.17
CTSA-203ENST00000372459 Q6JHZ5 121 aa16.1■□□□□ 0.17
CTSA-203ENST00000372459 FAM168BA1KXE4 195 aa16.09■□□□□ 0.17
CTSA-203ENST00000372459 LINC00846Q9NV44 126 aa16.09■□□□□ 0.17
CTSA-203ENST00000372459 CCKP06307 115 aa16.08■□□□□ 0.16
CTSA-203ENST00000372459 KCNQ1DNQ9H478 68 aa16.08■□□□□ 0.16
CTSA-203ENST00000372459 SS18L2Q9UHA2 77 aa16.08■□□□□ 0.16
CTSA-203ENST00000372459 TENM2Q9NT68 2774 aa16.08■□□□□ 0.16
CTSA-203ENST00000372459 IGLV2-33A0A075B6J2 118 aaPredicted RBP16.06■□□□□ 0.16
CTSA-203ENST00000372459 LRCOL1A6NCL2 159 aa16.06■□□□□ 0.16
CTSA-203ENST00000372459 Q6ZRN7 208 aaPredicted RBP16.06■□□□□ 0.16
CTSA-203ENST00000372459 VPS13DQ5THJ4 4388 aa16.05■□□□□ 0.16
CTSA-203ENST00000372459 HIST1H4AP62805 103 aaKnown RBP16.04■□□□□ 0.16
CTSA-203ENST00000372459 C16orf90A8MZG2 172 aa16.04■□□□□ 0.16
CTSA-203ENST00000372459 KRTAP7-1Q8IUC3 87 aa16.04■□□□□ 0.16
CTSA-203ENST00000372459 Q6ZQY7 126 aa16.03■□□□□ 0.16
CTSA-203ENST00000372459 FAM19A5Q7Z5A7 132 aaPredicted RBP16.03■□□□□ 0.16
CTSA-203ENST00000372459 M0R2N4 97 aa16.02■□□□□ 0.16
CTSA-203ENST00000372459 LINC00528Q8N1L1 170 aa16.02■□□□□ 0.16
CTSA-203ENST00000372459 H3BQ85 93 aa16.02■□□□□ 0.15
CTSA-203ENST00000372459 IGLV1-50A0A075B6I6 118 aa16.01■□□□□ 0.15
CTSA-203ENST00000372459 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP16.01■□□□□ 0.15
CTSA-203ENST00000372459 A0A096LNI7 61 aa16■□□□□ 0.15
CTSA-203ENST00000372459 MRPL55Q7Z7F7 128 aaKnown RBP16■□□□□ 0.15
CTSA-203ENST00000372459 RPL37AP8A6NKH3 93 aa15.99■□□□□ 0.15
CTSA-203ENST00000372459 PRYO14603 147 aa15.99■□□□□ 0.15
CTSA-203ENST00000372459 IGKV2-24A0A0C4DH68 120 aa15.97■□□□□ 0.15
CTSA-203ENST00000372459 GHRHP01286 108 aa15.97■□□□□ 0.15
CTSA-203ENST00000372459 ATOX1O00244 68 aa15.96■□□□□ 0.15
CTSA-203ENST00000372459 IGKV3D-7A0A0C4DH55 119 aa15.96■□□□□ 0.15
CTSA-203ENST00000372459 C3orf22Q8N5N4 141 aa15.96■□□□□ 0.15
CTSA-203ENST00000372459 PKIGQ9Y2B9 76 aa15.96■□□□□ 0.15
CTSA-203ENST00000372459 UQCRQO14949 82 aa15.95■□□□□ 0.14
CTSA-203ENST00000372459 ATP5EP2Q5VTU8 51 aa15.95■□□□□ 0.14
CTSA-203ENST00000372459 C9orf163Q8N9P6 203 aa15.95■□□□□ 0.14
CTSA-203ENST00000372459 SPRR1AP35321 89 aa15.93■□□□□ 0.14
CTSA-203ENST00000372459 Q6ZR54 194 aa15.92■□□□□ 0.14
CTSA-203ENST00000372459 LAMTOR3Q9UHA4 124 aa15.91■□□□□ 0.14
CTSA-203ENST00000372459 FBN3Q75N90 2809 aa15.91■□□□□ 0.14
CTSA-203ENST00000372459 LOC110117498A0A087WWA1 95 aa15.9■□□□□ 0.14
CTSA-203ENST00000372459 KRTAP4-16G5E9R7 235 aaPredicted RBP15.9■□□□□ 0.14
CTSA-203ENST00000372459 COX7CP15954 63 aa15.9■□□□□ 0.14
CTSA-203ENST00000372459 ETDCA0A1B0GVM5 59 aa15.89■□□□□ 0.13
CTSA-203ENST00000372459 A0A1W2PNN7 141 aa15.89■□□□□ 0.13
CTSA-203ENST00000372459 RBM3P98179 157 aaKnown RBP15.89■□□□□ 0.13
CTSA-203ENST00000372459 Q6ZRX8 168 aa15.89■□□□□ 0.13
CTSA-203ENST00000372459 C9orf153Q5TBE3 101 aa15.88■□□□□ 0.13
CTSA-203ENST00000372459 Q6ZQT0 140 aa15.87■□□□□ 0.13
CTSA-203ENST00000372459 WWC2-AS2Q96NR7 200 aa15.87■□□□□ 0.13
CTSA-203ENST00000372459 DHRS4-AS1Q9P1J3 65 aa15.87■□□□□ 0.13
CTSA-203ENST00000372459 A0A087WTM6 91 aa15.86■□□□□ 0.13
CTSA-203ENST00000372459 REG3GQ6UW15 175 aa15.85■□□□□ 0.13
CTSA-203ENST00000372459 CHTF8P0CG12 524 aa15.84■□□□□ 0.13
CTSA-203ENST00000372459 UBL5Q9BZL1 73 aa15.84■□□□□ 0.13
CTSA-203ENST00000372459 LINC00474Q9P2X8 69 aa15.84■□□□□ 0.13
CTSA-203ENST00000372459 LY6G6CO95867 125 aa15.83■□□□□ 0.12
CTSA-203ENST00000372459 A0A087WVE0 104 aa15.82■□□□□ 0.12
CTSA-203ENST00000372459 PDE6GP18545 87 aa15.82■□□□□ 0.12
CTSA-203ENST00000372459 Q9BRP9 147 aa15.8■□□□□ 0.12
CTSA-203ENST00000372459 KMT2AQ03164 3969 aa15.8■□□□□ 0.12
CTSA-203ENST00000372459 CRYGAP11844 174 aa15.79■□□□□ 0.12
CTSA-203ENST00000372459 C1orf134Q5TEV5 83 aa15.79■□□□□ 0.12
CTSA-203ENST00000372459 DSCR8Q96T75 97 aa15.78■□□□□ 0.12
CTSA-203ENST00000372459 SERP2Q8N6R1 65 aa15.76■□□□□ 0.11
CTSA-203ENST00000372459 LINC00476Q8WZB0 136 aa15.76■□□□□ 0.11
CTSA-203ENST00000372459 PHF5AQ7RTV0 110 aaKnown RBP15.75■□□□□ 0.11
CTSA-203ENST00000372459 UBE2BP63146 152 aa15.74■□□□□ 0.11
CTSA-203ENST00000372459 DEFB105AQ8NG35 78 aa15.73■□□□□ 0.11
CTSA-203ENST00000372459 DNAH2Q9P225 4427 aa15.73■□□□□ 0.11
CTSA-203ENST00000372459 Q8N377 158 aa15.71■□□□□ 0.11
CTSA-203ENST00000372459 RTL8CO15255 209 aa15.71■□□□□ 0.1
CTSA-203ENST00000372459 TRBV7-4A0A0J9YYF1 115 aa15.7■□□□□ 0.1
CTSA-203ENST00000372459 LINC01547P58512 204 aaPredicted RBP15.7■□□□□ 0.1
CTSA-203ENST00000372459 DPH3Q96FX2 82 aa15.7■□□□□ 0.1
CTSA-203ENST00000372459 PANO1I0J062 215 aa15.69■□□□□ 0.1
CTSA-203ENST00000372459 FAM19A1Q7Z5A9 133 aa15.69■□□□□ 0.1
CTSA-203ENST00000372459 SPACA4Q8TDM5 124 aa15.69■□□□□ 0.1
CTSA-203ENST00000372459 C3orf84H3BNL1 204 aa15.67■□□□□ 0.1
CTSA-203ENST00000372459 ERC2-IT1O76042 136 aa15.67■□□□□ 0.1
CTSA-203ENST00000372459 SMIM20Q8N5G0 67 aa15.67■□□□□ 0.1
CTSA-203ENST00000372459 IGLV5-48A0A075B6I7 105 aa15.66■□□□□ 0.1
CTSA-203ENST00000372459 Q6ZVQ6 151 aa15.66■□□□□ 0.1
CTSA-203ENST00000372459 ST20-AS1Q8NBB2 130 aa15.66■□□□□ 0.1
CTSA-203ENST00000372459 DNAH6Q9C0G6 4158 aa15.66■□□□□ 0.1
CTSA-203ENST00000372459 TGP01266 2768 aa15.66■□□□□ 0.1
CTSA-203ENST00000372459 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP15.66■□□□□ 0.1
CTSA-203ENST00000372459 KRTAP11-1Q8IUC1 163 aa15.64■□□□□ 0.09
CTSA-203ENST00000372459 FUSP35637 526 aaKnown RBP eCLIP15.64■□□□□ 0.09
CTSA-203ENST00000372459 PRLHP81277 87 aa15.64■□□□□ 0.09
CTSA-203ENST00000372459 IGLV5-52A0A0A0MRZ9 124 aa15.61■□□□□ 0.09
CTSA-203ENST00000372459 EPM2AB3EWF7 344 aa15.61■□□□□ 0.09
CTSA-203ENST00000372459 CXCL6P80162 114 aa15.61■□□□□ 0.09
CTSA-203ENST00000372459 DNAH17Q9UFH2 4485 aa15.61■□□□□ 0.09
CTSA-203ENST00000372459 HECTD4Q9Y4D8 3996 aa15.6■□□□□ 0.09
CTSA-203ENST00000372459 BCE1O60756 84 aa15.6■□□□□ 0.09
CTSA-203ENST00000372459 ALMS1Q8TCU4 4167 aa15.59■□□□□ 0.09
CTSA-203ENST00000372459 H0Y9J4 135 aa15.58■□□□□ 0.09
CTSA-203ENST00000372459 HIGD2AQ9BW72 106 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 120.5 ms