RNA–Protein interactions for RNA: ENST00000372195.5

RAPGEF1-203, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-203ENST00000372195 CASC10Q5T4H9 136 aa15.64■□□□□ 0.09
RAPGEF1-203ENST00000372195 PRR34Q9NV39 138 aa15.64■□□□□ 0.09
RAPGEF1-203ENST00000372195 H7BZZ5 65 aa15.63■□□□□ 0.09
RAPGEF1-203ENST00000372195 KLKP1Q107X0 134 aa15.61■□□□□ 0.09
RAPGEF1-203ENST00000372195 UQCR11O14957 56 aa15.61■□□□□ 0.09
RAPGEF1-203ENST00000372195 CYP4F30PQ9H0H9 118 aa15.61■□□□□ 0.09
RAPGEF1-203ENST00000372195 SMR3BP02814 79 aaPredicted RBP15.6■□□□□ 0.09
RAPGEF1-203ENST00000372195 MIR22HGQ0VDD5 57 aa15.6■□□□□ 0.09
RAPGEF1-203ENST00000372195 C19orf73Q9NVV2 129 aa15.6■□□□□ 0.09
RAPGEF1-203ENST00000372195 A0A1B0GVX0 72 aa15.58■□□□□ 0.09
RAPGEF1-203ENST00000372195 WWC2-AS2Q96NR7 200 aa15.57■□□□□ 0.08
RAPGEF1-203ENST00000372195 CEP295Q9C0D2 2601 aa15.55■□□□□ 0.08
RAPGEF1-203ENST00000372195 ANKRD17O75179 2603 aaKnown RBP15.55■□□□□ 0.08
RAPGEF1-203ENST00000372195 ZNF861PO60384 105 aa15.53■□□□□ 0.08
RAPGEF1-203ENST00000372195 A0A096LNT2 108 aa15.53■□□□□ 0.08
RAPGEF1-203ENST00000372195 LINC00304Q8N9R0 145 aa15.52■□□□□ 0.07
RAPGEF1-203ENST00000372195 PKD1L2Q7Z442 2459 aa15.51■□□□□ 0.07
RAPGEF1-203ENST00000372195 ZNF462Q96JM2 2506 aa15.5■□□□□ 0.07
RAPGEF1-203ENST00000372195 USP9YO00507 2555 aaPredicted RBP15.49■□□□□ 0.07
RAPGEF1-203ENST00000372195 A0A087WTM6 91 aa15.48■□□□□ 0.07
RAPGEF1-203ENST00000372195 J3QL48 77 aa15.48■□□□□ 0.07
RAPGEF1-203ENST00000372195 POLQO75417 2590 aa15.47■□□□□ 0.07
RAPGEF1-203ENST00000372195 A0A1W2PNM2 257 aa15.44■□□□□ 0.06
RAPGEF1-203ENST00000372195 LINC00612Q8N6U2 182 aa15.43■□□□□ 0.06
RAPGEF1-203ENST00000372195 COX6B2Q6YFQ2 88 aa15.43■□□□□ 0.06
RAPGEF1-203ENST00000372195 PSORS1C2Q9UIG4 136 aa15.42■□□□□ 0.06
RAPGEF1-203ENST00000372195 TLX1NBP0CAT3 122 aa15.41■□□□□ 0.06
RAPGEF1-203ENST00000372195 Q8N1X5 172 aa15.4■□□□□ 0.06
RAPGEF1-203ENST00000372195 CRIPTQ9P021 101 aa15.39■□□□□ 0.05
RAPGEF1-203ENST00000372195 PLA2G2DQ9UNK4 145 aa15.39■□□□□ 0.05
RAPGEF1-203ENST00000372195 A0A0D9SG42 100 aa15.38■□□□□ 0.05
RAPGEF1-203ENST00000372195 CHD8Q9HCK8 2581 aa15.38■□□□□ 0.05
RAPGEF1-203ENST00000372195 SPTBN4Q9H254 2564 aa15.37■□□□□ 0.05
RAPGEF1-203ENST00000372195 KTN1-AS1Q86SY8 53 aa15.37■□□□□ 0.05
RAPGEF1-203ENST00000372195 C9orf163Q8N9P6 203 aa15.37■□□□□ 0.05
RAPGEF1-203ENST00000372195 IGLV7-43P04211 117 aa15.37■□□□□ 0.05
RAPGEF1-203ENST00000372195 MTORP42345 2549 aa15.34■□□□□ 0.05
RAPGEF1-203ENST00000372195 C5orf42Q9H799 3197 aa15.33■□□□□ 0.04
RAPGEF1-203ENST00000372195 SPRR4Q96PI1 79 aa15.33■□□□□ 0.04
RAPGEF1-203ENST00000372195 CD164Q04900 197 aa15.32■□□□□ 0.04
RAPGEF1-203ENST00000372195 LINC01554Q52M75 96 aa15.31■□□□□ 0.04
RAPGEF1-203ENST00000372195 ACANP16112 2415 aa15.31■□□□□ 0.04
RAPGEF1-203ENST00000372195 ZNF575Q86XF7 245 aa15.29■□□□□ 0.04
RAPGEF1-203ENST00000372195 IGLV5-48A0A075B6I7 105 aa15.28■□□□□ 0.04
RAPGEF1-203ENST00000372195 IGLV5-37A0A075B6J1 123 aa15.27■□□□□ 0.03
RAPGEF1-203ENST00000372195 KRTAP1-3Q8IUG1 177 aa15.26■□□□□ 0.03
RAPGEF1-203ENST00000372195 CEP350Q5VT06 3117 aa15.25■□□□□ 0.03
RAPGEF1-203ENST00000372195 LCA10Q71F78 164 aa15.24■□□□□ 0.03
RAPGEF1-203ENST00000372195 FAM104AQ969W3 186 aa15.21■□□□□ 0.03
RAPGEF1-203ENST00000372195 PCNTO95613 3336 aa15.2■□□□□ 0.02
RAPGEF1-203ENST00000372195 CNBPP62633 177 aaKnown RBP15.18■□□□□ 0.02
RAPGEF1-203ENST00000372195 CDC42SE1Q9NRR8 79 aa15.17■□□□□ 0.02
RAPGEF1-203ENST00000372195 PRR26Q8N8Z3 221 aa15.15■□□□□ 0.02
RAPGEF1-203ENST00000372195 SPANXA2-OT1Q8N9U9 137 aa15.15■□□□□ 0.02
RAPGEF1-203ENST00000372195 KRTAP1-1Q07627 177 aa15.13■□□□□ 0.01
RAPGEF1-203ENST00000372195 OCR1Q9BZK8 76 aa15.13■□□□□ 0.01
RAPGEF1-203ENST00000372195 FAM229BQ4G0N7 80 aa15.1■□□□□ 0.01
RAPGEF1-203ENST00000372195 RBM12B-AS1Q9P1G2 102 aa15.05■□□□□ -0
RAPGEF1-203ENST00000372195 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP15.04■□□□□ -0
RAPGEF1-203ENST00000372195 Q1T7F1 81 aa15.03■□□□□ -0
RAPGEF1-203ENST00000372195 TNP2Q05952 138 aa15.03■□□□□ -0
RAPGEF1-203ENST00000372195 PRRC2CQ9Y520 2896 aaKnown RBP15.03■□□□□ -0
RAPGEF1-203ENST00000372195 CYSTM1Q9H1C7 97 aa15.02□□□□□ -0.01
RAPGEF1-203ENST00000372195 CR1P17927 2039 aa15.02□□□□□ -0.01
RAPGEF1-203ENST00000372195 Q8NDZ9 215 aa14.98□□□□□ -0.01
RAPGEF1-203ENST00000372195 BPTFQ12830 3046 aa14.96□□□□□ -0.01
RAPGEF1-203ENST00000372195 FASNP49327 2511 aaKnown RBP14.96□□□□□ -0.01
RAPGEF1-203ENST00000372195 Q5XG85 94 aa14.91□□□□□ -0.02
RAPGEF1-203ENST00000372195 HRES1P13985 223 aa14.9□□□□□ -0.02
RAPGEF1-203ENST00000372195 F8P00451 2351 aa14.9□□□□□ -0.02
RAPGEF1-203ENST00000372195 IGLV7-46A0A075B6I9 117 aa14.87□□□□□ -0.03
RAPGEF1-203ENST00000372195 PRAC1Q96KF2 57 aa14.84□□□□□ -0.03
RAPGEF1-203ENST00000372195 Q75L30 129 aa14.81□□□□□ -0.04
RAPGEF1-203ENST00000372195 Q8N9P0 234 aaPredicted RBP14.8□□□□□ -0.04
RAPGEF1-203ENST00000372195 FP248Q71RG6 208 aaPredicted RBP14.78□□□□□ -0.04
RAPGEF1-203ENST00000372195 A0A1B0GU33 70 aa14.78□□□□□ -0.04
RAPGEF1-203ENST00000372195 Q6ZSA8 131 aa14.77□□□□□ -0.04
RAPGEF1-203ENST00000372195 MMP24-AS1A0A0U1RRL7 71 aa14.77□□□□□ -0.05
RAPGEF1-203ENST00000372195 CHD7Q9P2D1 2997 aa14.73□□□□□ -0.05
RAPGEF1-203ENST00000372195 WIPF1O43516 503 aa14.73□□□□□ -0.05
RAPGEF1-203ENST00000372195 MKI67P46013 3256 aaKnown RBP14.69□□□□□ -0.06
RAPGEF1-203ENST00000372195 LUZP6Q538Z0 58 aa14.67□□□□□ -0.06
RAPGEF1-203ENST00000372195 LINC01558Q9Y6Z2 57 aa14.65□□□□□ -0.06
RAPGEF1-203ENST00000372195 Q5VV11 94 aa14.64□□□□□ -0.07
RAPGEF1-203ENST00000372195 SPINK7P58062 85 aa14.64□□□□□ -0.07
RAPGEF1-203ENST00000372195 CAMK2N1Q7Z7J9 78 aa14.62□□□□□ -0.07
RAPGEF1-203ENST00000372195 USP24Q9UPU5 2620 aa14.61□□□□□ -0.07
RAPGEF1-203ENST00000372195 ZCCHC13Q8WW36 166 aaKnown RBP14.6□□□□□ -0.07
RAPGEF1-203ENST00000372195 CFAP54Q96N23 3096 aa14.6□□□□□ -0.07
RAPGEF1-203ENST00000372195 CSAG1Q6PB30 78 aa14.58□□□□□ -0.08
RAPGEF1-203ENST00000372195 Q5W150 140 aa14.58□□□□□ -0.08
RAPGEF1-203ENST00000372195 PLAC8Q9NZF1 115 aa14.57□□□□□ -0.08
RAPGEF1-203ENST00000372195 OXTP01178 125 aa14.56□□□□□ -0.08
RAPGEF1-203ENST00000372195 SPRR1AP35321 89 aa14.56□□□□□ -0.08
RAPGEF1-203ENST00000372195 HECTD1Q9ULT8 2610 aa14.55□□□□□ -0.08
RAPGEF1-203ENST00000372195 S4R3F8 94 aa14.54□□□□□ -0.08
RAPGEF1-203ENST00000372195 M0R2T5 61 aa14.53□□□□□ -0.08
RAPGEF1-203ENST00000372195 H3BS24 57 aa14.52□□□□□ -0.09
RAPGEF1-203ENST00000372195 KRTAP1-5Q9BYS1 174 aa14.52□□□□□ -0.09
RAPGEF1-203ENST00000372195 A0A0C4DFX4 3053 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms