RNA–Protein interactions for RNA: ENST00000371320.7

SSBP3-204, Transcript of single stranded DNA binding protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP3, Length 2,077 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-204ENST00000371320 UQCRQO14949 82 aa18.78■□□□□ 0.6
SSBP3-204ENST00000371320 DNAH1Q9P2D7 4330 aa18.77■□□□□ 0.6
SSBP3-204ENST00000371320 MDFIQ99750 246 aa18.74■□□□□ 0.59
SSBP3-204ENST00000371320 FAM168BA1KXE4 195 aa18.73■□□□□ 0.59
SSBP3-204ENST00000371320 COX7CP15954 63 aa18.73■□□□□ 0.59
SSBP3-204ENST00000371320 C9orf153Q5TBE3 101 aa18.72■□□□□ 0.59
SSBP3-204ENST00000371320 MGAM2Q2M2H8 2515 aa18.72■□□□□ 0.59
SSBP3-204ENST00000371320 IGLV5-37A0A075B6J1 123 aa18.72■□□□□ 0.59
SSBP3-204ENST00000371320 FAM19A1Q7Z5A9 133 aa18.71■□□□□ 0.59
SSBP3-204ENST00000371320 RPL37AP8A6NKH3 93 aa18.7■□□□□ 0.58
SSBP3-204ENST00000371320 Q6ZVQ6 151 aa18.7■□□□□ 0.58
SSBP3-204ENST00000371320 IGLV1-50A0A075B6I6 118 aa18.67■□□□□ 0.58
SSBP3-204ENST00000371320 LOC107984640A0A0U1RRK4 108 aa18.66■□□□□ 0.58
SSBP3-204ENST00000371320 LINC01547P58512 204 aaPredicted RBP18.66■□□□□ 0.58
SSBP3-204ENST00000371320 PRYO14603 147 aa18.65■□□□□ 0.58
SSBP3-204ENST00000371320 HAMPP81172 84 aa18.65■□□□□ 0.58
SSBP3-204ENST00000371320 KRTAP7-1Q8IUC3 87 aa18.65■□□□□ 0.58
SSBP3-204ENST00000371320 DHRS4-AS1Q9P1J3 65 aa18.64■□□□□ 0.57
SSBP3-204ENST00000371320 Q6ZRX8 168 aa18.63■□□□□ 0.57
SSBP3-204ENST00000371320 DEFB105AQ8NG35 78 aa18.63■□□□□ 0.57
SSBP3-204ENST00000371320 SERP2Q8N6R1 65 aa18.62■□□□□ 0.57
SSBP3-204ENST00000371320 FAM19A5Q7Z5A7 132 aaPredicted RBP18.62■□□□□ 0.57
SSBP3-204ENST00000371320 KRTAP4-16G5E9R7 235 aaPredicted RBP18.61■□□□□ 0.57
SSBP3-204ENST00000371320 ETDCA0A1B0GVM5 59 aa18.61■□□□□ 0.57
SSBP3-204ENST00000371320 SPRR1AP35321 89 aa18.6■□□□□ 0.57
SSBP3-204ENST00000371320 MRPL55Q7Z7F7 128 aaKnown RBP18.6■□□□□ 0.57
SSBP3-204ENST00000371320 KRTAP1-5Q9BYS1 174 aa18.59■□□□□ 0.57
SSBP3-204ENST00000371320 Q8N377 158 aa18.59■□□□□ 0.57
SSBP3-204ENST00000371320 Q9BRP9 147 aa18.57■□□□□ 0.56
SSBP3-204ENST00000371320 CRYGAP11844 174 aa18.56■□□□□ 0.56
SSBP3-204ENST00000371320 CXCL6P80162 114 aa18.56■□□□□ 0.56
SSBP3-204ENST00000371320 UBE2DNLQ8IWF7 75 aa18.56■□□□□ 0.56
SSBP3-204ENST00000371320 STAB2Q8WWQ8 2551 aa18.55■□□□□ 0.56
SSBP3-204ENST00000371320 PSCAO43653 123 aa18.53■□□□□ 0.56
SSBP3-204ENST00000371320 APLNQ9ULZ1 77 aa18.53■□□□□ 0.56
SSBP3-204ENST00000371320 COL7A1Q02388 2944 aa18.5■□□□□ 0.55
SSBP3-204ENST00000371320 DNAH9Q9NYC9 4486 aa18.48■□□□□ 0.55
SSBP3-204ENST00000371320 IGLV5-48A0A075B6I7 105 aa18.48■□□□□ 0.55
SSBP3-204ENST00000371320 CNBPP62633 177 aaKnown RBP18.47■□□□□ 0.55
SSBP3-204ENST00000371320 ST20-AS1Q8NBB2 130 aa18.46■□□□□ 0.55
SSBP3-204ENST00000371320 B9D2Q9BPU9 175 aa18.46■□□□□ 0.55
SSBP3-204ENST00000371320 REG3GQ6UW15 175 aa18.45■□□□□ 0.54
SSBP3-204ENST00000371320 SCXQ7RTU7 201 aa18.45■□□□□ 0.54
SSBP3-204ENST00000371320 A0A096LNI7 61 aa18.45■□□□□ 0.54
SSBP3-204ENST00000371320 C16orf90A8MZG2 172 aa18.44■□□□□ 0.54
SSBP3-204ENST00000371320 UBE2BP63146 152 aa18.43■□□□□ 0.54
SSBP3-204ENST00000371320 IGKV2-24A0A0C4DH68 120 aa18.42■□□□□ 0.54
SSBP3-204ENST00000371320 LYSTQ99698 3801 aa18.42■□□□□ 0.54
SSBP3-204ENST00000371320 ERC2-IT1O76042 136 aa18.41■□□□□ 0.54
SSBP3-204ENST00000371320 DNAH10Q8IVF4 4471 aa18.41■□□□□ 0.54
SSBP3-204ENST00000371320 NREPQ16612 68 aa18.39■□□□□ 0.53
SSBP3-204ENST00000371320 CYSTM1Q9H1C7 97 aa18.39■□□□□ 0.53
SSBP3-204ENST00000371320 BCE1O60756 84 aa18.38■□□□□ 0.53
SSBP3-204ENST00000371320 C3orf84H3BNL1 204 aa18.38■□□□□ 0.53
SSBP3-204ENST00000371320 C14orf177Q52M58 125 aa18.37■□□□□ 0.53
SSBP3-204ENST00000371320 IGLV2-33A0A075B6J2 118 aaPredicted RBP18.37■□□□□ 0.53
SSBP3-204ENST00000371320 A0A1W2PNN7 141 aa18.36■□□□□ 0.53
SSBP3-204ENST00000371320 TNP2Q05952 138 aa18.35■□□□□ 0.53
SSBP3-204ENST00000371320 DYNC2H1Q8NCM8 4307 aaKnown RBP18.34■□□□□ 0.53
SSBP3-204ENST00000371320 FUSP35637 526 aaKnown RBP eCLIP18.34■□□□□ 0.532e-6■■■□□ 16.5
SSBP3-204ENST00000371320 C1orf137Q5JT78 98 aa18.34■□□□□ 0.53
SSBP3-204ENST00000371320 SMIM20Q8N5G0 67 aa18.32■□□□□ 0.52
SSBP3-204ENST00000371320 TRAV7A0A075B6U4 112 aa18.3■□□□□ 0.52
SSBP3-204ENST00000371320 A0A1W2PNM2 257 aa18.3■□□□□ 0.52
SSBP3-204ENST00000371320 A0A1B0GW54 56 aa18.29■□□□□ 0.52
SSBP3-204ENST00000371320 BPY2O14599 106 aa18.26■□□□□ 0.51
SSBP3-204ENST00000371320 NUPR2A6NF83 97 aa18.26■□□□□ 0.51
SSBP3-204ENST00000371320 Q8N9L7 120 aa18.25■□□□□ 0.51
SSBP3-204ENST00000371320 NBDYA0A0U1RRE5 68 aa18.24■□□□□ 0.51
SSBP3-204ENST00000371320 PRLHP81277 87 aa18.24■□□□□ 0.51
SSBP3-204ENST00000371320 Q8NBF4 154 aa18.24■□□□□ 0.51
SSBP3-204ENST00000371320 CHTF8P0CG12 524 aa18.23■□□□□ 0.51
SSBP3-204ENST00000371320 C20orf197Q8N268 126 aa18.23■□□□□ 0.51
SSBP3-204ENST00000371320 SMIM29Q86T20 159 aa18.22■□□□□ 0.51
SSBP3-204ENST00000371320 IGKV4-1P06312 121 aa18.22■□□□□ 0.51
SSBP3-204ENST00000371320 TMEM258P61165 79 aa18.22■□□□□ 0.51
SSBP3-204ENST00000371320 TENM2Q9NT68 2774 aa18.21■□□□□ 0.51
SSBP3-204ENST00000371320 LRCOL1A6NCL2 159 aa18.21■□□□□ 0.51
SSBP3-204ENST00000371320 CSMD3Q7Z407 3707 aa18.2■□□□□ 0.5
SSBP3-204ENST00000371320 F8WEM9 126 aa18.19■□□□□ 0.5
SSBP3-204ENST00000371320 C9orf163Q8N9P6 203 aa18.19■□□□□ 0.5
SSBP3-204ENST00000371320 SPRR4Q96PI1 79 aa18.19■□□□□ 0.5
SSBP3-204ENST00000371320 PHF5AQ7RTV0 110 aaKnown RBP18.18■□□□□ 0.5
SSBP3-204ENST00000371320 HIGD2AQ9BW72 106 aa18.18■□□□□ 0.5
SSBP3-204ENST00000371320 DNAH7Q8WXX0 4024 aa18.17■□□□□ 0.5
SSBP3-204ENST00000371320 DNHD1Q96M86 4753 aa18.17■□□□□ 0.5
SSBP3-204ENST00000371320 PLECQ15149 4684 aaKnown RBP18.16■□□□□ 0.5
SSBP3-204ENST00000371320 LINC00476Q8WZB0 136 aa18.15■□□□□ 0.5
SSBP3-204ENST00000371320 PKIGQ9Y2B9 76 aa18.14■□□□□ 0.49
SSBP3-204ENST00000371320 KRTAP11-1Q8IUC1 163 aa18.13■□□□□ 0.49
SSBP3-204ENST00000371320 Q6ZRN7 208 aaPredicted RBP18.12■□□□□ 0.49
SSBP3-204ENST00000371320 LINC00474Q9P2X8 69 aa18.08■□□□□ 0.48
SSBP3-204ENST00000371320 EPM2AB3EWF7 344 aa18.07■□□□□ 0.48
SSBP3-204ENST00000371320 IGFL1Q6UW32 110 aa18.07■□□□□ 0.48
SSBP3-204ENST00000371320 J3KT08 172 aa18.05■□□□□ 0.48
SSBP3-204ENST00000371320 H0Y9J4 135 aa18.05■□□□□ 0.48
SSBP3-204ENST00000371320 A0A0G2JQZ4 141 aa18.04■□□□□ 0.48
SSBP3-204ENST00000371320 KLKP1Q107X0 134 aa18.04■□□□□ 0.48
SSBP3-204ENST00000371320 IGLV8-61A0A075B6I0 122 aa18.03■□□□□ 0.48
SSBP3-204ENST00000371320 UBE2AP49459 152 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms