RNA–Protein interactions for RNA: ENST00000370085.3

SSR4-202, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2 BASIC

Gene SSR4, Length 526 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-202ENST00000370085 PRLHP81277 87 aa8.35□□□□□ -1.07
SSR4-202ENST00000370085 PKHD1L1Q86WI1 4243 aa8.34□□□□□ -1.07
SSR4-202ENST00000370085 TRAV13-2A0A0B4J235 113 aa8.34□□□□□ -1.07
SSR4-202ENST00000370085 SPRR1AP35321 89 aa8.34□□□□□ -1.07
SSR4-202ENST00000370085 LINC01600Q96MT4 127 aa8.34□□□□□ -1.07
SSR4-202ENST00000370085 HIGD1BQ9P298 99 aa8.34□□□□□ -1.07
SSR4-202ENST00000370085 A6NDN8 102 aa8.33□□□□□ -1.08
SSR4-202ENST00000370085 ZNF73O43830 326 aaPredicted RBP8.33□□□□□ -1.08
SSR4-202ENST00000370085 KRTAP13-1Q8IUC0 172 aa8.33□□□□□ -1.08
SSR4-202ENST00000370085 HIGD2AQ9BW72 106 aa8.33□□□□□ -1.08
SSR4-202ENST00000370085 ZNF706Q9Y5V0 76 aaPredicted RBP8.31□□□□□ -1.08
SSR4-202ENST00000370085 RPL13AP40429 203 aaKnown RBP8.3□□□□□ -1.08
SSR4-202ENST00000370085 A4D1N5 150 aa8.29□□□□□ -1.08
SSR4-202ENST00000370085 B5MCH6 92 aa8.29□□□□□ -1.08
SSR4-202ENST00000370085 KRTAP4-16G5E9R7 235 aaPredicted RBP8.29□□□□□ -1.08
SSR4-202ENST00000370085 Q6ZRX8 168 aa8.29□□□□□ -1.08
SSR4-202ENST00000370085 TAL2Q16559 108 aa8.28□□□□□ -1.08
SSR4-202ENST00000370085 LRP1Q07954 4544 aaKnown RBP8.28□□□□□ -1.08
SSR4-202ENST00000370085 TMEM238LA0A1B0GVL6 79 aa8.27□□□□□ -1.09
SSR4-202ENST00000370085 A6NJY4 79 aa8.27□□□□□ -1.09
SSR4-202ENST00000370085 UQCR10Q9UDW1 63 aa8.27□□□□□ -1.09
SSR4-202ENST00000370085 SMIM6P0DI80 62 aa8.26□□□□□ -1.09
SSR4-202ENST00000370085 CRYGAP11844 174 aa8.26□□□□□ -1.09
SSR4-202ENST00000370085 C2orf91Q6ZV80 131 aa8.26□□□□□ -1.09
SSR4-202ENST00000370085 FAT3Q8TDW7 4589 aa8.25□□□□□ -1.09
SSR4-202ENST00000370085 TRBV7-6A0A0J9YX20 115 aa8.25□□□□□ -1.09
SSR4-202ENST00000370085 KRTAP1-4P0C5Y4 121 aa8.25□□□□□ -1.09
SSR4-202ENST00000370085 FAM229BQ4G0N7 80 aa8.25□□□□□ -1.09
SSR4-202ENST00000370085 C6orf99Q4VX62 202 aa8.25□□□□□ -1.09
SSR4-202ENST00000370085 SMCR5Q8TEV8 140 aa8.25□□□□□ -1.09
SSR4-202ENST00000370085 DHRS4-AS1Q9P1J3 65 aa8.25□□□□□ -1.09
SSR4-202ENST00000370085 COX7BP24311 80 aa8.24□□□□□ -1.09
SSR4-202ENST00000370085 VAMP3Q15836 100 aa8.24□□□□□ -1.09
SSR4-202ENST00000370085 CEND1Q8N111 149 aa8.24□□□□□ -1.09
SSR4-202ENST00000370085 PRR26Q8N8Z3 221 aa8.24□□□□□ -1.09
SSR4-202ENST00000370085 RAB37Q96AX2 223 aa8.24□□□□□ -1.09
SSR4-202ENST00000370085 A0A1B0GWB2 263 aa8.23□□□□□ -1.09
SSR4-202ENST00000370085 MT1HL1P0DM35 61 aa8.23□□□□□ -1.09
SSR4-202ENST00000370085 KRTAP10-8P60410 259 aa8.23□□□□□ -1.09
SSR4-202ENST00000370085 ELOF1P60002 83 aaKnown RBP8.22□□□□□ -1.09
SSR4-202ENST00000370085 HSD52Q0P140 79 aa8.22□□□□□ -1.09
SSR4-202ENST00000370085 SPRR4Q96PI1 79 aa8.22□□□□□ -1.09
SSR4-202ENST00000370085 C12orf57Q99622 126 aa8.22□□□□□ -1.09
SSR4-202ENST00000370085 SMIM11BQ8TCY0 68 aa8.21□□□□□ -1.1
SSR4-202ENST00000370085 Q9BRP9 147 aa8.21□□□□□ -1.1
SSR4-202ENST00000370085 NHP2Q9NX24 153 aaKnown RBP8.21□□□□□ -1.1
SSR4-202ENST00000370085 A0A0B4J2C4 111 aa8.2□□□□□ -1.1
SSR4-202ENST00000370085 SLC25A20O43772 301 aa8.19□□□□□ -1.1
SSR4-202ENST00000370085 CFC1BP0CG36 223 aa8.19□□□□□ -1.1
SSR4-202ENST00000370085 CFC1P0CG37 223 aa8.19□□□□□ -1.1
SSR4-202ENST00000370085 TYMSOSQ8TAI1 123 aa8.19□□□□□ -1.1
SSR4-202ENST00000370085 BVES-AS1Q5T3Y7 98 aa8.18□□□□□ -1.1
SSR4-202ENST00000370085 GAGE2AQ6NT46 116 aa8.18□□□□□ -1.1
SSR4-202ENST00000370085 ANAPC11Q9NYG5 84 aa8.18□□□□□ -1.1
SSR4-202ENST00000370085 A0A087X002 238 aa8.17□□□□□ -1.1
SSR4-202ENST00000370085 Q1RN00 199 aa8.17□□□□□ -1.1
SSR4-202ENST00000370085 H7C2G1 150 aa8.16□□□□□ -1.1
SSR4-202ENST00000370085 ERC2-IT1O76042 136 aa8.16□□□□□ -1.1
SSR4-202ENST00000370085 SNCGO76070 127 aa8.16□□□□□ -1.1
SSR4-202ENST00000370085 PRO1854Q9UHT4 67 aa8.16□□□□□ -1.1
SSR4-202ENST00000370085 LOC105371267A0A1B0GV96 52 aa8.15□□□□□ -1.1
SSR4-202ENST00000370085 TSTD3H0UI37 97 aa8.15□□□□□ -1.1
SSR4-202ENST00000370085 FXYD2P54710 66 aa8.15□□□□□ -1.1
SSR4-202ENST00000370085 LINC00483Q53H64 154 aa8.15□□□□□ -1.1
SSR4-202ENST00000370085 PRO1933Q9H354 126 aa8.15□□□□□ -1.1
SSR4-202ENST00000370085 TNXBP22105 4242 aa8.11□□□□□ -1.11
SSR4-202ENST00000370085 H0YGX0 51 aa8.11□□□□□ -1.11
SSR4-202ENST00000370085 M0R143 59 aa8.11□□□□□ -1.11
SSR4-202ENST00000370085 KRTAP13-2Q52LG2 175 aa8.11□□□□□ -1.11
SSR4-202ENST00000370085 ST20-AS1Q8NBB2 130 aa8.11□□□□□ -1.11
SSR4-202ENST00000370085 HERC1Q15751 4861 aa8.11□□□□□ -1.11
SSR4-202ENST00000370085 TEX49A0A1B0GTD5 131 aa8.1□□□□□ -1.11
SSR4-202ENST00000370085 hADV29S1A0JD25 119 aa8.1□□□□□ -1.11
SSR4-202ENST00000370085 C4orf48Q5BLP8 95 aa8.1□□□□□ -1.11
SSR4-202ENST00000370085 LINC00575Q6W349 94 aa8.1□□□□□ -1.11
SSR4-202ENST00000370085 LINC00304Q8N9R0 145 aa8.1□□□□□ -1.11
SSR4-202ENST00000370085 LAMTOR3Q9UHA4 124 aa8.1□□□□□ -1.11
SSR4-202ENST00000370085 IGLV9-49A0A0B4J1Y8 123 aa8.09□□□□□ -1.11
SSR4-202ENST00000370085 C3orf22Q8N5N4 141 aa8.09□□□□□ -1.11
SSR4-202ENST00000370085 DEFB105AQ8NG35 78 aa8.09□□□□□ -1.11
SSR4-202ENST00000370085 COX6CP09669 75 aa8.08□□□□□ -1.12
SSR4-202ENST00000370085 SPRR1BP22528 89 aa8.08□□□□□ -1.12
SSR4-202ENST00000370085 CTAG1AP78358 180 aa8.08□□□□□ -1.12
SSR4-202ENST00000370085 C9orf153Q5TBE3 101 aa8.08□□□□□ -1.12
SSR4-202ENST00000370085 SPAG11AQ6PDA7 123 aa8.08□□□□□ -1.12
SSR4-202ENST00000370085 PSMB2P49721 201 aa8.07□□□□□ -1.12
SSR4-202ENST00000370085 MOBPQ13875 183 aa8.07□□□□□ -1.12
SSR4-202ENST00000370085 SSBP3-AS1Q7Z2R9 100 aa8.07□□□□□ -1.12
SSR4-202ENST00000370085 GHRHP01286 108 aa8.06□□□□□ -1.12
SSR4-202ENST00000370085 IGLV5-48A0A075B6I7 105 aa8.05□□□□□ -1.12
SSR4-202ENST00000370085 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.05□□□□□ -1.12
SSR4-202ENST00000370085 Q8NBF4 154 aa8.05□□□□□ -1.12
SSR4-202ENST00000370085 A0A1B0GX51 115 aa8.04□□□□□ -1.12
SSR4-202ENST00000370085 K7ERJ3 54 aa8.04□□□□□ -1.12
SSR4-202ENST00000370085 OCIAD2Q56VL3 154 aa8.04□□□□□ -1.12
SSR4-202ENST00000370085 Q6ZQY7 126 aa8.04□□□□□ -1.12
SSR4-202ENST00000370085 F8WEM9 126 aa8.03□□□□□ -1.12
SSR4-202ENST00000370085 TRIAP1O43715 76 aa8.03□□□□□ -1.12
SSR4-202ENST00000370085 TSPAN13O95857 204 aa8.03□□□□□ -1.12
SSR4-202ENST00000370085 PPDPFLQ8WWR9 84 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 230.8 ms