RNA–Protein interactions for RNA: ENST00000370025.8

PRPF38B-203, Transcript of pre-mRNA processing factor 38B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38B, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-203ENST00000370025 F8WDY8 70 aa6.7□□□□□ -1.34
PRPF38B-203ENST00000370025 DNAH3Q8TD57 4116 aa6.7□□□□□ -1.34
PRPF38B-203ENST00000370025 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.7□□□□□ -1.34
PRPF38B-203ENST00000370025 TENM3Q9P273 2699 aa6.7□□□□□ -1.34
PRPF38B-203ENST00000370025 SPAG11BQ08648 103 aa6.7□□□□□ -1.34
PRPF38B-203ENST00000370025 Q6ZQY7 126 aa6.69□□□□□ -1.34
PRPF38B-203ENST00000370025 PRR4Q16378 134 aa6.69□□□□□ -1.34
PRPF38B-203ENST00000370025 UNQ6190/PRO20217Q6UXQ8 127 aa6.69□□□□□ -1.34
PRPF38B-203ENST00000370025 KLKP1Q107X0 134 aa6.68□□□□□ -1.34
PRPF38B-203ENST00000370025 ZNF561-AS1K7EIQ3 104 aa6.68□□□□□ -1.34
PRPF38B-203ENST00000370025 KIAA0087Q14695 138 aa6.68□□□□□ -1.34
PRPF38B-203ENST00000370025 NREPQ16612 68 aa6.68□□□□□ -1.34
PRPF38B-203ENST00000370025 Q6ZQT0 140 aa6.67□□□□□ -1.34
PRPF38B-203ENST00000370025 TMEM254Q8TBM7 123 aa6.67□□□□□ -1.34
PRPF38B-203ENST00000370025 ANK2Q01484 3957 aa6.66□□□□□ -1.34
PRPF38B-203ENST00000370025 LINC01556Q5JQF7 62 aa6.66□□□□□ -1.34
PRPF38B-203ENST00000370025 PSPHP1O15172 72 aa6.66□□□□□ -1.34
PRPF38B-203ENST00000370025 Q8NDZ9 215 aa6.66□□□□□ -1.34
PRPF38B-203ENST00000370025 IGKV2D-24A0A075B6R9 120 aa6.65□□□□□ -1.34
PRPF38B-203ENST00000370025 BPY2O14599 106 aa6.65□□□□□ -1.34
PRPF38B-203ENST00000370025 COX17Q14061 63 aa6.65□□□□□ -1.35
PRPF38B-203ENST00000370025 HIGD2AQ9BW72 106 aa6.65□□□□□ -1.35
PRPF38B-203ENST00000370025 CAMK2N2Q96S95 79 aa6.64□□□□□ -1.35
PRPF38B-203ENST00000370025 C10orf25Q5T742 122 aa6.64□□□□□ -1.35
PRPF38B-203ENST00000370025 B9D2Q9BPU9 175 aa6.64□□□□□ -1.35
PRPF38B-203ENST00000370025 EPM2AB3EWF7 344 aa6.63□□□□□ -1.35
PRPF38B-203ENST00000370025 FUSP35637 526 aaKnown RBP eCLIP6.63□□□□□ -1.35
PRPF38B-203ENST00000370025 C3orf84H3BNL1 204 aa6.63□□□□□ -1.35
PRPF38B-203ENST00000370025 DNAH10OSP0CZ25 163 aa6.63□□□□□ -1.35
PRPF38B-203ENST00000370025 TRBV10-3A0A0K0K1G6 114 aa6.63□□□□□ -1.35
PRPF38B-203ENST00000370025 LINC00588Q9Y4M8 146 aa6.63□□□□□ -1.35
PRPF38B-203ENST00000370025 LINC00575Q6W349 94 aa6.62□□□□□ -1.35
PRPF38B-203ENST00000370025 TRBV7-4A0A0J9YYF1 115 aa6.61□□□□□ -1.35
PRPF38B-203ENST00000370025 FAM30AQ9NZY2 134 aa6.61□□□□□ -1.35
PRPF38B-203ENST00000370025 KRTAP26-1Q6PEX3 210 aa6.61□□□□□ -1.35
PRPF38B-203ENST00000370025 MUC7Q8TAX7 377 aa6.61□□□□□ -1.35
PRPF38B-203ENST00000370025 PRYO14603 147 aa6.59□□□□□ -1.35
PRPF38B-203ENST00000370025 GVQW2A0A096LPI5 108 aaPredicted RBP6.59□□□□□ -1.35
PRPF38B-203ENST00000370025 HUWE1Q7Z6Z7 4374 aaKnown RBP6.58□□□□□ -1.36
PRPF38B-203ENST00000370025 LINC00167Q96N53 147 aa6.58□□□□□ -1.36
PRPF38B-203ENST00000370025 NDUFC1O43677 76 aa6.57□□□□□ -1.36
PRPF38B-203ENST00000370025 PMAIP1Q13794 54 aa6.57□□□□□ -1.36
PRPF38B-203ENST00000370025 RPL37AP8A6NKH3 93 aa6.57□□□□□ -1.36
PRPF38B-203ENST00000370025 A8MU10 97 aa6.57□□□□□ -1.36
PRPF38B-203ENST00000370025 C6orf48Q9UBA6 75 aa6.57□□□□□ -1.36
PRPF38B-203ENST00000370025 C15orf56Q8N910 161 aa6.56□□□□□ -1.36
PRPF38B-203ENST00000370025 NKAPP1Q8N9T2 125 aa6.56□□□□□ -1.36
PRPF38B-203ENST00000370025 CXCL6P80162 114 aa6.55□□□□□ -1.36
PRPF38B-203ENST00000370025 DIRC1Q969H9 104 aa6.55□□□□□ -1.36
PRPF38B-203ENST00000370025 LOC110117498A0A087WWA1 95 aa6.54□□□□□ -1.36
PRPF38B-203ENST00000370025 UBE2DNLQ8IWF7 75 aa6.54□□□□□ -1.36
PRPF38B-203ENST00000370025 Q6ZRU5 148 aa6.54□□□□□ -1.36
PRPF38B-203ENST00000370025 APLNQ9ULZ1 77 aa6.54□□□□□ -1.36
PRPF38B-203ENST00000370025 A0A096LNI7 61 aa6.53□□□□□ -1.36
PRPF38B-203ENST00000370025 IGKV2-24A0A0C4DH68 120 aa6.53□□□□□ -1.36
PRPF38B-203ENST00000370025 SYCNQ0VAF6 134 aa6.53□□□□□ -1.36
PRPF38B-203ENST00000370025 SMIM29Q86T20 159 aa6.53□□□□□ -1.36
PRPF38B-203ENST00000370025 NUPR2A6NF83 97 aa6.52□□□□□ -1.37
PRPF38B-203ENST00000370025 COX7BP24311 80 aa6.52□□□□□ -1.37
PRPF38B-203ENST00000370025 ATP5EP56381 51 aaPredicted RBP6.52□□□□□ -1.37
PRPF38B-203ENST00000370025 SPTSSBQ8NFR3 76 aa6.51□□□□□ -1.37
PRPF38B-203ENST00000370025 STAB2Q8WWQ8 2551 aa6.51□□□□□ -1.37
PRPF38B-203ENST00000370025 DEFB116Q30KQ4 102 aa6.51□□□□□ -1.37
PRPF38B-203ENST00000370025 C1orf64Q8NEQ6 169 aa6.51□□□□□ -1.37
PRPF38B-203ENST00000370025 Q6ZRP5 223 aa6.51□□□□□ -1.37
PRPF38B-203ENST00000370025 BCE1O60756 84 aa6.5□□□□□ -1.37
PRPF38B-203ENST00000370025 IGKV4-1P06312 121 aa6.5□□□□□ -1.37
PRPF38B-203ENST00000370025 UBE2BP63146 152 aa6.5□□□□□ -1.37
PRPF38B-203ENST00000370025 DNAH9Q9NYC9 4486 aa6.5□□□□□ -1.37
PRPF38B-203ENST00000370025 ZNF73O43830 326 aaPredicted RBP6.49□□□□□ -1.37
PRPF38B-203ENST00000370025 A8MUN3 132 aa6.49□□□□□ -1.37
PRPF38B-203ENST00000370025 OCR1Q9BZK8 76 aa6.49□□□□□ -1.37
PRPF38B-203ENST00000370025 CASC10Q5T4H9 136 aa6.48□□□□□ -1.37
PRPF38B-203ENST00000370025 PDE6GP18545 87 aa6.48□□□□□ -1.37
PRPF38B-203ENST00000370025 COL7A1Q02388 2944 aa6.48□□□□□ -1.37
PRPF38B-203ENST00000370025 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.47□□□□□ -1.37
PRPF38B-203ENST00000370025 PSCAO43653 123 aa6.47□□□□□ -1.37
PRPF38B-203ENST00000370025 TRAV22A0A0B4J277 110 aa6.46□□□□□ -1.37
PRPF38B-203ENST00000370025 IGLV6-57P01721 117 aa6.46□□□□□ -1.37
PRPF38B-203ENST00000370025 ETDCA0A1B0GVM5 59 aa6.46□□□□□ -1.38
PRPF38B-203ENST00000370025 hDV103S1A0JD37 113 aa6.45□□□□□ -1.38
PRPF38B-203ENST00000370025 VPREB1P12018 145 aa6.45□□□□□ -1.38
PRPF38B-203ENST00000370025 KRTAP1-5Q9BYS1 174 aa6.45□□□□□ -1.38
PRPF38B-203ENST00000370025 A0A0G2JQZ4 141 aa6.45□□□□□ -1.38
PRPF38B-203ENST00000370025 A0A1W2PNN7 141 aa6.45□□□□□ -1.38
PRPF38B-203ENST00000370025 M0R378 163 aa6.45□□□□□ -1.38
PRPF38B-203ENST00000370025 TLX1NBP0CAT3 122 aa6.45□□□□□ -1.38
PRPF38B-203ENST00000370025 KRTAP21-3Q3LHN1 58 aa6.44□□□□□ -1.38
PRPF38B-203ENST00000370025 PRR15Q8IV56 129 aa6.43□□□□□ -1.38
PRPF38B-203ENST00000370025 TENM2Q9NT68 2774 aa6.43□□□□□ -1.38
PRPF38B-203ENST00000370025 CHKB-CPT1BH3BT56 60 aa6.43□□□□□ -1.38
PRPF38B-203ENST00000370025 ST20-AS1Q8NBB2 130 aa6.43□□□□□ -1.38
PRPF38B-203ENST00000370025 NBDYA0A0U1RRE5 68 aa6.41□□□□□ -1.38
PRPF38B-203ENST00000370025 C14orf177Q52M58 125 aa6.41□□□□□ -1.38
PRPF38B-203ENST00000370025 WFDC13Q8IUB5 93 aa6.41□□□□□ -1.38
PRPF38B-203ENST00000370025 FAM168BA1KXE4 195 aa6.4□□□□□ -1.38
PRPF38B-203ENST00000370025 PLA2G2DQ9UNK4 145 aa6.4□□□□□ -1.38
PRPF38B-203ENST00000370025 MRPL55Q7Z7F7 128 aaKnown RBP6.4□□□□□ -1.39
PRPF38B-203ENST00000370025 ERC2-IT1O76042 136 aa6.39□□□□□ -1.39
PRPF38B-203ENST00000370025 ELOF1P60002 83 aaKnown RBP6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms