RNA–Protein interactions for RNA: ENST00000369407.3

PHGDH-201, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 2

Gene PHGDH, Length 3,180 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-201ENST00000369407 TENM1Q9UKZ4 2725 aa8.17□□□□□ -1.1
PHGDH-201ENST00000369407 ELOF1P60002 83 aaKnown RBP8.17□□□□□ -1.1
PHGDH-201ENST00000369407 SMR3AQ99954 134 aa8.17□□□□□ -1.1
PHGDH-201ENST00000369407 OTOGQ6ZRI0 2925 aa8.17□□□□□ -1.1
PHGDH-201ENST00000369407 A8MU10 97 aa8.16□□□□□ -1.1
PHGDH-201ENST00000369407 LYRM9A8MSI8 78 aa8.16□□□□□ -1.1
PHGDH-201ENST00000369407 PRYO14603 147 aa8.16□□□□□ -1.1
PHGDH-201ENST00000369407 NDUFC1O43677 76 aa8.16□□□□□ -1.1
PHGDH-201ENST00000369407 SPTSSBQ8NFR3 76 aa8.16□□□□□ -1.1
PHGDH-201ENST00000369407 CAMK2N2Q96S95 79 aa8.16□□□□□ -1.1
PHGDH-201ENST00000369407 TEP1Q99973 2627 aaKnown RBP8.15□□□□□ -1.11
PHGDH-201ENST00000369407 PDZD2O15018 2839 aa8.15□□□□□ -1.11
PHGDH-201ENST00000369407 VPREB1P12018 145 aa8.14□□□□□ -1.11
PHGDH-201ENST00000369407 IGKV4-1P06312 121 aa8.14□□□□□ -1.11
PHGDH-201ENST00000369407 FAM30AQ9NZY2 134 aa8.14□□□□□ -1.11
PHGDH-201ENST00000369407 LELP1Q5T871 98 aa8.14□□□□□ -1.11
PHGDH-201ENST00000369407 Q6ZRU5 148 aa8.14□□□□□ -1.11
PHGDH-201ENST00000369407 KRTAP1-1Q07627 177 aa8.13□□□□□ -1.11
PHGDH-201ENST00000369407 PRR34Q9NV39 138 aa8.12□□□□□ -1.11
PHGDH-201ENST00000369407 WFDC10BQ8IUB3 73 aa8.12□□□□□ -1.11
PHGDH-201ENST00000369407 LINC00528Q8N1L1 170 aa8.11□□□□□ -1.11
PHGDH-201ENST00000369407 ATP5EP56381 51 aaPredicted RBP8.1□□□□□ -1.11
PHGDH-201ENST00000369407 MRPL55Q7Z7F7 128 aaKnown RBP8.1□□□□□ -1.11
PHGDH-201ENST00000369407 GVQW2A0A096LPI5 108 aaPredicted RBP8.1□□□□□ -1.11
PHGDH-201ENST00000369407 Q8NAQ8 132 aa8.1□□□□□ -1.11
PHGDH-201ENST00000369407 M0R378 163 aa8.09□□□□□ -1.11
PHGDH-201ENST00000369407 OCR1Q9BZK8 76 aa8.09□□□□□ -1.11
PHGDH-201ENST00000369407 Q6ZRP5 223 aa8.08□□□□□ -1.12
PHGDH-201ENST00000369407 H3BQ85 93 aa8.08□□□□□ -1.12
PHGDH-201ENST00000369407 SPART-AS1P0CW21 52 aa8.08□□□□□ -1.12
PHGDH-201ENST00000369407 SMIM29Q86T20 159 aa8.08□□□□□ -1.12
PHGDH-201ENST00000369407 A8MUN3 132 aa8.07□□□□□ -1.12
PHGDH-201ENST00000369407 RPL37AP8A6NKH3 93 aa8.06□□□□□ -1.12
PHGDH-201ENST00000369407 Q8N377 158 aa8.06□□□□□ -1.12
PHGDH-201ENST00000369407 C15orf56Q8N910 161 aa8.06□□□□□ -1.12
PHGDH-201ENST00000369407 C1orf64Q8NEQ6 169 aa8.06□□□□□ -1.12
PHGDH-201ENST00000369407 APOC4P55056 127 aa8.05□□□□□ -1.12
PHGDH-201ENST00000369407 SERTAD4-AS1Q5TG53 156 aa8.05□□□□□ -1.12
PHGDH-201ENST00000369407 Q6ZTC4 211 aa8.05□□□□□ -1.12
PHGDH-201ENST00000369407 PRR15Q8IV56 129 aa8.05□□□□□ -1.12
PHGDH-201ENST00000369407 EGFEM1PQ0D2K5 195 aa8.04□□□□□ -1.12
PHGDH-201ENST00000369407 BAHCC1Q9P281 2608 aa8.03□□□□□ -1.12
PHGDH-201ENST00000369407 TRAV22A0A0B4J277 110 aa8.03□□□□□ -1.12
PHGDH-201ENST00000369407 KPRPQ5T749 579 aaPredicted RBP8.03□□□□□ -1.12
PHGDH-201ENST00000369407 ST20-AS1Q8NBB2 130 aa8.03□□□□□ -1.12
PHGDH-201ENST00000369407 IGKV2D-24A0A075B6R9 120 aa8.02□□□□□ -1.13
PHGDH-201ENST00000369407 A0A0G2JQZ4 141 aa8.02□□□□□ -1.13
PHGDH-201ENST00000369407 A0A1W2PNN7 141 aa8.02□□□□□ -1.13
PHGDH-201ENST00000369407 NSD1Q96L73 2696 aaPredicted RBP8.02□□□□□ -1.13
PHGDH-201ENST00000369407 CD164Q04900 197 aa8.02□□□□□ -1.13
PHGDH-201ENST00000369407 KRTAP26-1Q6PEX3 210 aa8.02□□□□□ -1.13
PHGDH-201ENST00000369407 NKAPP1Q8N9T2 125 aa8.02□□□□□ -1.13
PHGDH-201ENST00000369407 C7orf33Q8WU49 177 aa8.01□□□□□ -1.13
PHGDH-201ENST00000369407 A0A1W2PNM2 257 aa8.01□□□□□ -1.13
PHGDH-201ENST00000369407 FAM168BA1KXE4 195 aa8.01□□□□□ -1.13
PHGDH-201ENST00000369407 CHKB-CPT1BH3BT56 60 aa8.01□□□□□ -1.13
PHGDH-201ENST00000369407 ERC2-IT1O76042 136 aa8.01□□□□□ -1.13
PHGDH-201ENST00000369407 hDV103S1A0JD37 113 aa8□□□□□ -1.13
PHGDH-201ENST00000369407 STAB1Q9NY15 2570 aa7.99□□□□□ -1.13
PHGDH-201ENST00000369407 TENM3Q9P273 2699 aa7.99□□□□□ -1.13
PHGDH-201ENST00000369407 DEFB116Q30KQ4 102 aa7.99□□□□□ -1.13
PHGDH-201ENST00000369407 J3QKU1 62 aa7.98□□□□□ -1.13
PHGDH-201ENST00000369407 NOTCH1P46531 2555 aa7.98□□□□□ -1.13
PHGDH-201ENST00000369407 MAST4O15021 2626 aa7.98□□□□□ -1.13
PHGDH-201ENST00000369407 Q9BRP9 147 aa7.98□□□□□ -1.13
PHGDH-201ENST00000369407 RBM12B-AS1Q9P1G2 102 aa7.98□□□□□ -1.13
PHGDH-201ENST00000369407 SYCNQ0VAF6 134 aa7.97□□□□□ -1.13
PHGDH-201ENST00000369407 C1orf137Q5JT78 98 aa7.97□□□□□ -1.13
PHGDH-201ENST00000369407 K7EQZ3 153 aa7.97□□□□□ -1.13
PHGDH-201ENST00000369407 KCNQ1DNQ9H478 68 aa7.96□□□□□ -1.14
PHGDH-201ENST00000369407 IGLV5-48A0A075B6I7 105 aa7.95□□□□□ -1.14
PHGDH-201ENST00000369407 DSCR10P59022 87 aa7.94□□□□□ -1.14
PHGDH-201ENST00000369407 INAFM1C9JVW0 142 aa7.93□□□□□ -1.14
PHGDH-201ENST00000369407 KMT2BQ9UMN6 2715 aaPredicted RBP7.93□□□□□ -1.14
PHGDH-201ENST00000369407 ANK2Q01484 3957 aa7.93□□□□□ -1.14
PHGDH-201ENST00000369407 ETDCA0A1B0GVM5 59 aa7.93□□□□□ -1.14
PHGDH-201ENST00000369407 C11orf45Q8TAV5 145 aa7.93□□□□□ -1.14
PHGDH-201ENST00000369407 PRR15LQ9BU68 103 aa7.93□□□□□ -1.14
PHGDH-201ENST00000369407 FBN1P35555 2871 aaKnown RBP7.92□□□□□ -1.14
PHGDH-201ENST00000369407 Q6ZRX8 168 aa7.92□□□□□ -1.14
PHGDH-201ENST00000369407 CASC10Q5T4H9 136 aa7.92□□□□□ -1.14
PHGDH-201ENST00000369407 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.92□□□□□ -1.14
PHGDH-201ENST00000369407 NBEAL1Q6ZS30 2694 aa7.91□□□□□ -1.14
PHGDH-201ENST00000369407 UBE2BP63146 152 aa7.91□□□□□ -1.14
PHGDH-201ENST00000369407 Q8NBF4 154 aa7.91□□□□□ -1.14
PHGDH-201ENST00000369407 A6NED7 52 aa7.9□□□□□ -1.14
PHGDH-201ENST00000369407 Q1T7F1 81 aa7.9□□□□□ -1.14
PHGDH-201ENST00000369407 WFDC13Q8IUB5 93 aa7.9□□□□□ -1.14
PHGDH-201ENST00000369407 SRRM2Q9UQ35 2752 aaKnown RBP7.9□□□□□ -1.15
PHGDH-201ENST00000369407 KRTAP7-1Q8IUC3 87 aa7.89□□□□□ -1.15
PHGDH-201ENST00000369407 HCG22E2RYF7 251 aa7.88□□□□□ -1.15
PHGDH-201ENST00000369407 DHRS4-AS1Q9P1J3 65 aa7.88□□□□□ -1.15
PHGDH-201ENST00000369407 TNP2Q05952 138 aa7.88□□□□□ -1.15
PHGDH-201ENST00000369407 OXLD1Q5BKU9 147 aa7.88□□□□□ -1.15
PHGDH-201ENST00000369407 PSCAO43653 123 aa7.87□□□□□ -1.15
PHGDH-201ENST00000369407 COL6A5A8TX70 2615 aa7.87□□□□□ -1.15
PHGDH-201ENST00000369407 IGLV1-50A0A075B6I6 118 aa7.87□□□□□ -1.15
PHGDH-201ENST00000369407 KTN1-AS1Q86SY8 53 aa7.87□□□□□ -1.15
PHGDH-201ENST00000369407 C16orf90A8MZG2 172 aa7.87□□□□□ -1.15
PHGDH-201ENST00000369407 KRTAP4-16G5E9R7 235 aaPredicted RBP7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms