RNA–Protein interactions for RNA: ENST00000368530.6

TPM3-210, Transcript of tropomyosin 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TPM3, Length 1,523 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-210ENST00000368530 TRBV20-1A0A075B6N2 111 aa6.41□□□□□ -1.38
TPM3-210ENST00000368530 SLPIP03973 132 aa6.41□□□□□ -1.38
TPM3-210ENST00000368530 KRTAP10-4P60372 401 aaPredicted RBP6.41□□□□□ -1.38
TPM3-210ENST00000368530 NDUFC2-KCTD14E9PQ53 114 aa6.4□□□□□ -1.38
TPM3-210ENST00000368530 F8WDY8 70 aa6.4□□□□□ -1.38
TPM3-210ENST00000368530 ATXN8Q156A1 80 aa6.4□□□□□ -1.38
TPM3-210ENST00000368530 SMIM11BQ8TCY0 68 aa6.4□□□□□ -1.38
TPM3-210ENST00000368530 NDUFC2O95298 119 aa6.4□□□□□ -1.39
TPM3-210ENST00000368530 RPL18AQ02543 176 aaKnown RBP6.4□□□□□ -1.39
TPM3-210ENST00000368530 Q6ZRP5 223 aa6.39□□□□□ -1.39
TPM3-210ENST00000368530 PRO0461Q9UI25 63 aa6.39□□□□□ -1.39
TPM3-210ENST00000368530 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.39□□□□□ -1.39
TPM3-210ENST00000368530 UBR4Q5T4S7 5183 aa6.38□□□□□ -1.39
TPM3-210ENST00000368530 C9JAW5 83 aa6.38□□□□□ -1.39
TPM3-210ENST00000368530 PLA2G1BP04054 148 aaKnown RBP6.38□□□□□ -1.39
TPM3-210ENST00000368530 RPL28P46779 137 aaKnown RBP6.38□□□□□ -1.39
TPM3-210ENST00000368530 S100A7L2Q5SY68 101 aa6.38□□□□□ -1.39
TPM3-210ENST00000368530 FAT3Q8TDW7 4589 aa6.37□□□□□ -1.39
TPM3-210ENST00000368530 F8W1H4 67 aa6.37□□□□□ -1.39
TPM3-210ENST00000368530 LINC01620Q4KN68 170 aa6.37□□□□□ -1.39
TPM3-210ENST00000368530 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.36□□□□□ -1.39
TPM3-210ENST00000368530 LST1O00453 97 aa6.36□□□□□ -1.39
TPM3-210ENST00000368530 GAGE2BQ13066 116 aa6.36□□□□□ -1.39
TPM3-210ENST00000368530 RNF151Q2KHN1 245 aa6.36□□□□□ -1.39
TPM3-210ENST00000368530 C9orf129Q5T035 196 aaKnown RBP6.36□□□□□ -1.39
TPM3-210ENST00000368530 SCXQ7RTU7 201 aa6.36□□□□□ -1.39
TPM3-210ENST00000368530 VPREB1P12018 145 aa6.35□□□□□ -1.39
TPM3-210ENST00000368530 SERTAD4-AS1Q5TG53 156 aa6.35□□□□□ -1.39
TPM3-210ENST00000368530 FAM218AQ96MZ4 157 aa6.35□□□□□ -1.39
TPM3-210ENST00000368530 TMEM126AQ9H061 195 aa6.35□□□□□ -1.39
TPM3-210ENST00000368530 SLC25A20O43772 301 aa6.35□□□□□ -1.39
TPM3-210ENST00000368530 ETDBQ3ZM63 59 aa6.35□□□□□ -1.39
TPM3-210ENST00000368530 TRBV10-3A0A0K0K1G6 114 aa6.34□□□□□ -1.39
TPM3-210ENST00000368530 TRBV10-2A0A0K0K1G8 114 aa6.34□□□□□ -1.39
TPM3-210ENST00000368530 TLX1NBP0CAT3 122 aa6.34□□□□□ -1.39
TPM3-210ENST00000368530 A0A087WYN8 130 aa6.33□□□□□ -1.4
TPM3-210ENST00000368530 LOC107984640A0A0U1RRK4 108 aa6.33□□□□□ -1.4
TPM3-210ENST00000368530 IGLV6-57P01721 117 aa6.33□□□□□ -1.4
TPM3-210ENST00000368530 C14orf177Q52M58 125 aa6.33□□□□□ -1.4
TPM3-210ENST00000368530 CIRBP-AS1Q8TBR5 109 aa6.33□□□□□ -1.4
TPM3-210ENST00000368530 FAM168BA1KXE4 195 aa6.32□□□□□ -1.4
TPM3-210ENST00000368530 M0R378 163 aa6.32□□□□□ -1.4
TPM3-210ENST00000368530 OXTP01178 125 aa6.32□□□□□ -1.4
TPM3-210ENST00000368530 C6orf99Q4VX62 202 aa6.32□□□□□ -1.4
TPM3-210ENST00000368530 OCIAD2Q56VL3 154 aa6.32□□□□□ -1.4
TPM3-210ENST00000368530 NKAPP1Q8N9T2 125 aa6.32□□□□□ -1.4
TPM3-210ENST00000368530 H0YGX0 51 aa6.31□□□□□ -1.4
TPM3-210ENST00000368530 ANKRD29Q8N6D5 301 aa6.31□□□□□ -1.4
TPM3-210ENST00000368530 TRAV23DV6A0A075B6W5 121 aa6.3□□□□□ -1.4
TPM3-210ENST00000368530 IGKV2-24A0A0C4DH68 120 aa6.3□□□□□ -1.4
TPM3-210ENST00000368530 TRACP01848 142 aa6.3□□□□□ -1.4
TPM3-210ENST00000368530 CNBPP62633 177 aaKnown RBP6.3□□□□□ -1.4
TPM3-210ENST00000368530 FAM19A5Q7Z5A7 132 aaPredicted RBP6.3□□□□□ -1.4
TPM3-210ENST00000368530 PKHD1L1Q86WI1 4243 aa6.3□□□□□ -1.4
TPM3-210ENST00000368530 C7orf33Q8WU49 177 aa6.3□□□□□ -1.4
TPM3-210ENST00000368530 A0A096LNI7 61 aa6.29□□□□□ -1.4
TPM3-210ENST00000368530 DNAL4O96015 105 aa6.29□□□□□ -1.4
TPM3-210ENST00000368530 H3BT86 120 aa6.28□□□□□ -1.4
TPM3-210ENST00000368530 TEN1Q86WV5 123 aa6.28□□□□□ -1.4
TPM3-210ENST00000368530 KRTAP7-1Q8IUC3 87 aa6.28□□□□□ -1.4
TPM3-210ENST00000368530 DIRC1Q969H9 104 aa6.28□□□□□ -1.4
TPM3-210ENST00000368530 PLA2G2DQ9UNK4 145 aa6.28□□□□□ -1.4
TPM3-210ENST00000368530 RPL37AP8A6NKH3 93 aa6.27□□□□□ -1.41
TPM3-210ENST00000368530 K7ERU9 68 aa6.27□□□□□ -1.41
TPM3-210ENST00000368530 ZNF73O43830 326 aaPredicted RBP6.27□□□□□ -1.41
TPM3-210ENST00000368530 BAALC-AS2P0C853 105 aa6.27□□□□□ -1.41
TPM3-210ENST00000368530 CDIP1Q9H305 208 aa6.27□□□□□ -1.41
TPM3-210ENST00000368530 M0QXV9 152 aa6.26□□□□□ -1.41
TPM3-210ENST00000368530 CHTF8P0CG12 524 aa6.26□□□□□ -1.41
TPM3-210ENST00000368530 C22orf24Q9Y442 160 aa6.26□□□□□ -1.41
TPM3-210ENST00000368530 IGLV5-37A0A075B6J1 123 aa6.25□□□□□ -1.41
TPM3-210ENST00000368530 MT1HL1P0DM35 61 aa6.25□□□□□ -1.41
TPM3-210ENST00000368530 COX7BP24311 80 aa6.25□□□□□ -1.41
TPM3-210ENST00000368530 PPDPFLQ8WWR9 84 aa6.25□□□□□ -1.41
TPM3-210ENST00000368530 TEX49A0A1B0GTD5 131 aa6.25□□□□□ -1.41
TPM3-210ENST00000368530 A0A1W2PNN7 141 aa6.25□□□□□ -1.41
TPM3-210ENST00000368530 LINC00575Q6W349 94 aa6.25□□□□□ -1.41
TPM3-210ENST00000368530 C9orf163Q8N9P6 203 aa6.25□□□□□ -1.41
TPM3-210ENST00000368530 LINC00167Q96N53 147 aa6.25□□□□□ -1.41
TPM3-210ENST00000368530 hADV29S1A0JD25 119 aa6.24□□□□□ -1.41
TPM3-210ENST00000368530 MRPL55Q7Z7F7 128 aaKnown RBP6.24□□□□□ -1.41
TPM3-210ENST00000368530 LINC01600Q96MT4 127 aa6.24□□□□□ -1.41
TPM3-210ENST00000368530 IGLV1-50A0A075B6I6 118 aa6.23□□□□□ -1.41
TPM3-210ENST00000368530 A0A1B0GX51 115 aa6.23□□□□□ -1.41
TPM3-210ENST00000368530 PANO1I0J062 215 aa6.23□□□□□ -1.41
TPM3-210ENST00000368530 SNCGO76070 127 aa6.23□□□□□ -1.41
TPM3-210ENST00000368530 RPL37AP61513 92 aaKnown RBP6.23□□□□□ -1.41
TPM3-210ENST00000368530 KCNQ1DNQ9H478 68 aa6.23□□□□□ -1.41
TPM3-210ENST00000368530 ORMDL1Q9P0S3 153 aa6.23□□□□□ -1.41
TPM3-210ENST00000368530 CBY1Q9Y3M2 126 aa6.23□□□□□ -1.41
TPM3-210ENST00000368530 A0A1B0GV72 72 aa6.22□□□□□ -1.41
TPM3-210ENST00000368530 J3QR89 54 aa6.22□□□□□ -1.41
TPM3-210ENST00000368530 ELOF1P60002 83 aaKnown RBP6.22□□□□□ -1.41
TPM3-210ENST00000368530 SDIM1Q6ZPB5 146 aa6.22□□□□□ -1.41
TPM3-210ENST00000368530 DPH3Q96FX2 82 aa6.21□□□□□ -1.42
TPM3-210ENST00000368530 TRBV7-6A0A0J9YX20 115 aa6.2□□□□□ -1.42
TPM3-210ENST00000368530 PRYO14603 147 aa6.2□□□□□ -1.42
TPM3-210ENST00000368530 Q6ZQY7 126 aa6.2□□□□□ -1.42
TPM3-210ENST00000368530 VPS25Q9BRG1 176 aa6.2□□□□□ -1.42
TPM3-210ENST00000368530 PKIGQ9Y2B9 76 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms