RNA–Protein interactions for RNA: ENST00000368215.7

PTPRK-206, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 4,651 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-206ENST00000368215 DEFB116Q30KQ4 102 aa5.64□□□□□ -1.51
PTPRK-206ENST00000368215 HRCT1Q6UXD1 115 aa5.64□□□□□ -1.51
PTPRK-206ENST00000368215 Q6ZQT0 140 aa5.64□□□□□ -1.51
PTPRK-206ENST00000368215 FAM30AQ9NZY2 134 aa5.64□□□□□ -1.51
PTPRK-206ENST00000368215 GVQW2A0A096LPI5 108 aaPredicted RBP5.63□□□□□ -1.51
PTPRK-206ENST00000368215 TMEM258P61165 79 aa5.63□□□□□ -1.51
PTPRK-206ENST00000368215 FAM168BA1KXE4 195 aa5.63□□□□□ -1.51
PTPRK-206ENST00000368215 NHLRC4P0CG21 123 aaPredicted RBP5.63□□□□□ -1.51
PTPRK-206ENST00000368215 IGLV9-49A0A0B4J1Y8 123 aa5.63□□□□□ -1.51
PTPRK-206ENST00000368215 PRYO14603 147 aa5.63□□□□□ -1.51
PTPRK-206ENST00000368215 F8WDY8 70 aa5.63□□□□□ -1.51
PTPRK-206ENST00000368215 C15orf56Q8N910 161 aa5.63□□□□□ -1.51
PTPRK-206ENST00000368215 SPENQ96T58 3664 aaKnown RBP5.63□□□□□ -1.51
PTPRK-206ENST00000368215 TRAV7A0A075B6U4 112 aa5.62□□□□□ -1.51
PTPRK-206ENST00000368215 SERTAD4-AS1Q5TG53 156 aa5.62□□□□□ -1.51
PTPRK-206ENST00000368215 HIVEP1P15822 2718 aa5.62□□□□□ -1.51
PTPRK-206ENST00000368215 LRCOL1A6NCL2 159 aa5.62□□□□□ -1.51
PTPRK-206ENST00000368215 PRR4Q16378 134 aa5.62□□□□□ -1.51
PTPRK-206ENST00000368215 ST20-AS1Q8NBB2 130 aa5.61□□□□□ -1.51
PTPRK-206ENST00000368215 LY6G6CO95867 125 aa5.61□□□□□ -1.51
PTPRK-206ENST00000368215 A0A087WSZ3 146 aa5.6□□□□□ -1.51
PTPRK-206ENST00000368215 DNAH10OSP0CZ25 163 aa5.6□□□□□ -1.51
PTPRK-206ENST00000368215 K7EIL1 84 aa5.6□□□□□ -1.51
PTPRK-206ENST00000368215 Q9BRP9 147 aa5.6□□□□□ -1.51
PTPRK-206ENST00000368215 NSD1Q96L73 2696 aaPredicted RBP5.59□□□□□ -1.51
PTPRK-206ENST00000368215 NUPR2A6NF83 97 aa5.59□□□□□ -1.51
PTPRK-206ENST00000368215 CASC10Q5T4H9 136 aa5.59□□□□□ -1.51
PTPRK-206ENST00000368215 MPLKIPQ8TAP9 179 aa5.59□□□□□ -1.51
PTPRK-206ENST00000368215 CHTF8P0CG12 524 aa5.58□□□□□ -1.52
PTPRK-206ENST00000368215 SPINK6Q6UWN8 80 aa5.58□□□□□ -1.52
PTPRK-206ENST00000368215 Q6ZRX8 168 aa5.58□□□□□ -1.52
PTPRK-206ENST00000368215 LOC110117498A0A087WWA1 95 aa5.58□□□□□ -1.52
PTPRK-206ENST00000368215 TRBV7-6A0A0J9YX20 115 aa5.58□□□□□ -1.52
PTPRK-206ENST00000368215 CXCL6P80162 114 aa5.57□□□□□ -1.52
PTPRK-206ENST00000368215 Q8NDZ9 215 aa5.57□□□□□ -1.52
PTPRK-206ENST00000368215 MDFIQ99750 246 aa5.57□□□□□ -1.52
PTPRK-206ENST00000368215 LINC00528Q8N1L1 170 aa5.57□□□□□ -1.52
PTPRK-206ENST00000368215 PHF5AQ7RTV0 110 aaKnown RBP5.57□□□□□ -1.52
PTPRK-206ENST00000368215 LINC00474Q9P2X8 69 aa5.57□□□□□ -1.52
PTPRK-206ENST00000368215 NIPBLQ6KC79 2804 aaeCLIP5.56□□□□□ -1.52
PTPRK-206ENST00000368215 CUBNO60494 3623 aa5.56□□□□□ -1.52
PTPRK-206ENST00000368215 BSNQ9UPA5 3926 aa5.56□□□□□ -1.52
PTPRK-206ENST00000368215 CRYGAP11844 174 aa5.55□□□□□ -1.52
PTPRK-206ENST00000368215 LINC01600Q96MT4 127 aa5.55□□□□□ -1.52
PTPRK-206ENST00000368215 IGKV4-1P06312 121 aa5.54□□□□□ -1.52
PTPRK-206ENST00000368215 NDUFC1O43677 76 aa5.54□□□□□ -1.52
PTPRK-206ENST00000368215 TMEM254Q8TBM7 123 aa5.54□□□□□ -1.52
PTPRK-206ENST00000368215 KCNQ1DNQ9H478 68 aa5.53□□□□□ -1.52
PTPRK-206ENST00000368215 SMIM29Q86T20 159 aa5.53□□□□□ -1.52
PTPRK-206ENST00000368215 TM2D3Q9BRN9 247 aa5.53□□□□□ -1.52
PTPRK-206ENST00000368215 A0A0G2JQZ4 141 aa5.53□□□□□ -1.52
PTPRK-206ENST00000368215 A0A1W2PNN7 141 aa5.53□□□□□ -1.52
PTPRK-206ENST00000368215 LINC00476Q8WZB0 136 aa5.53□□□□□ -1.52
PTPRK-206ENST00000368215 IGLV1-50A0A075B6I6 118 aa5.53□□□□□ -1.52
PTPRK-206ENST00000368215 C5orf47Q569G3 176 aa5.53□□□□□ -1.52
PTPRK-206ENST00000368215 BAHCC1Q9P281 2608 aa5.52□□□□□ -1.53
PTPRK-206ENST00000368215 Q8NBF4 154 aa5.52□□□□□ -1.53
PTPRK-206ENST00000368215 IGLV5-52A0A0A0MRZ9 124 aa5.52□□□□□ -1.53
PTPRK-206ENST00000368215 C16orf90A8MZG2 172 aa5.52□□□□□ -1.53
PTPRK-206ENST00000368215 LINC00208Q96KT6 92 aa5.52□□□□□ -1.53
PTPRK-206ENST00000368215 Q8N377 158 aa5.51□□□□□ -1.53
PTPRK-206ENST00000368215 NBDYA0A0U1RRE5 68 aa5.51□□□□□ -1.53
PTPRK-206ENST00000368215 EPM2AB3EWF7 344 aa5.51□□□□□ -1.53
PTPRK-206ENST00000368215 BRK1Q8WUW1 75 aa5.51□□□□□ -1.53
PTPRK-206ENST00000368215 C4orf48Q5BLP8 95 aa5.5□□□□□ -1.53
PTPRK-206ENST00000368215 OBSCN-AS1Q96MR7 158 aa5.5□□□□□ -1.53
PTPRK-206ENST00000368215 ZNF706Q9Y5V0 76 aaPredicted RBP5.5□□□□□ -1.53
PTPRK-206ENST00000368215 TRBV7-4A0A0J9YYF1 115 aa5.5□□□□□ -1.53
PTPRK-206ENST00000368215 WIPF1O43516 503 aa5.5□□□□□ -1.53
PTPRK-206ENST00000368215 CASC2Q6XLA1 102 aa5.49□□□□□ -1.53
PTPRK-206ENST00000368215 HCG22E2RYF7 251 aa5.49□□□□□ -1.53
PTPRK-206ENST00000368215 ERC2-IT1O76042 136 aa5.49□□□□□ -1.53
PTPRK-206ENST00000368215 CIRBP-AS1Q8TBR5 109 aa5.49□□□□□ -1.53
PTPRK-206ENST00000368215 C1orf134Q5TEV5 83 aa5.49□□□□□ -1.53
PTPRK-206ENST00000368215 IGHV6-1A0A0B4J1U7 121 aa5.48□□□□□ -1.53
PTPRK-206ENST00000368215 SERP1Q9Y6X1 66 aa5.48□□□□□ -1.53
PTPRK-206ENST00000368215 RPL37AP61513 92 aaKnown RBP5.48□□□□□ -1.53
PTPRK-206ENST00000368215 ATP5EP56381 51 aaPredicted RBP5.47□□□□□ -1.53
PTPRK-206ENST00000368215 CSMD2Q7Z408 3487 aa5.46□□□□□ -1.54
PTPRK-206ENST00000368215 TLX1NBP0CAT3 122 aa5.46□□□□□ -1.54
PTPRK-206ENST00000368215 SMIM26A0A096LP01 95 aa5.45□□□□□ -1.54
PTPRK-206ENST00000368215 K7EQZ3 153 aa5.45□□□□□ -1.54
PTPRK-206ENST00000368215 CHKB-CPT1BH3BT56 60 aa5.44□□□□□ -1.54
PTPRK-206ENST00000368215 MOBPQ13875 183 aa5.44□□□□□ -1.54
PTPRK-206ENST00000368215 PCOTHQ58A44 107 aa5.44□□□□□ -1.54
PTPRK-206ENST00000368215 KMT2BQ9UMN6 2715 aaPredicted RBP5.44□□□□□ -1.54
PTPRK-206ENST00000368215 TENM4Q6N022 2769 aa5.44□□□□□ -1.54
PTPRK-206ENST00000368215 H0Y9P7 68 aa5.44□□□□□ -1.54
PTPRK-206ENST00000368215 BCE1O60756 84 aa5.44□□□□□ -1.54
PTPRK-206ENST00000368215 RTL8CO15255 209 aa5.44□□□□□ -1.54
PTPRK-206ENST00000368215 IGFL1Q6UW32 110 aa5.44□□□□□ -1.54
PTPRK-206ENST00000368215 A0A1W2PNM2 257 aa5.43□□□□□ -1.54
PTPRK-206ENST00000368215 A0A0U1RQV1 116 aa5.43□□□□□ -1.54
PTPRK-206ENST00000368215 PLA2G2DQ9UNK4 145 aa5.42□□□□□ -1.54
PTPRK-206ENST00000368215 KRTAP26-1Q6PEX3 210 aa5.42□□□□□ -1.54
PTPRK-206ENST00000368215 A0A1B0GW54 56 aa5.42□□□□□ -1.54
PTPRK-206ENST00000368215 APLNQ9ULZ1 77 aa5.42□□□□□ -1.54
PTPRK-206ENST00000368215 NBPF19A0A087WUL8 3843 aa5.42□□□□□ -1.54
PTPRK-206ENST00000368215 STAB2Q8WWQ8 2551 aa5.41□□□□□ -1.54
PTPRK-206ENST00000368215 C4orf26Q17RF5 130 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms