RNA–Protein interactions for RNA: ENST00000361125.1

SMURF1-201, Transcript of SMAD specific E3 ubiquitin protein ligase 1, humanhuman

TSL 1 (best) BASIC

Gene SMURF1, Length 5,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMURF1-201ENST00000361125 KRTAP1-1Q07627 177 aa13.83□□□□□ -0.2
SMURF1-201ENST00000361125 IGFL1Q6UW32 110 aa13.82□□□□□ -0.2
SMURF1-201ENST00000361125 A0A0G2JQZ4 141 aa13.81□□□□□ -0.2
SMURF1-201ENST00000361125 A0A1W2PNN7 141 aa13.81□□□□□ -0.2
SMURF1-201ENST00000361125 CHD9Q3L8U1 2897 aa13.81□□□□□ -0.2
SMURF1-201ENST00000361125 H3BPC8 53 aa13.8□□□□□ -0.2
SMURF1-201ENST00000361125 ERC2-IT1O76042 136 aa13.79□□□□□ -0.2
SMURF1-201ENST00000361125 CASC10Q5T4H9 136 aa13.79□□□□□ -0.2
SMURF1-201ENST00000361125 A0A087WTM6 91 aa13.78□□□□□ -0.2
SMURF1-201ENST00000361125 FASNP49327 2511 aaKnown RBP13.77□□□□□ -0.21
SMURF1-201ENST00000361125 MRPL34Q9BQ48 92 aaKnown RBP13.75□□□□□ -0.21
SMURF1-201ENST00000361125 DSCR10P59022 87 aa13.75□□□□□ -0.21
SMURF1-201ENST00000361125 Q8N377 158 aa13.75□□□□□ -0.21
SMURF1-201ENST00000361125 IGLV8-61A0A075B6I0 122 aa13.74□□□□□ -0.21
SMURF1-201ENST00000361125 ATP11AUNQ6ZP68 121 aa13.74□□□□□ -0.21
SMURF1-201ENST00000361125 ANAPC11Q9NYG5 84 aa13.74□□□□□ -0.21
SMURF1-201ENST00000361125 C8orf87E5RJ46 101 aa13.72□□□□□ -0.21
SMURF1-201ENST00000361125 SMR3BP02814 79 aaPredicted RBP13.72□□□□□ -0.21
SMURF1-201ENST00000361125 KLKP1Q107X0 134 aa13.72□□□□□ -0.21
SMURF1-201ENST00000361125 A0A0C4DFX4 3053 aa13.72□□□□□ -0.21
SMURF1-201ENST00000361125 ZNF861PO60384 105 aa13.71□□□□□ -0.21
SMURF1-201ENST00000361125 J3QL48 77 aa13.69□□□□□ -0.22
SMURF1-201ENST00000361125 APLNQ9ULZ1 77 aa13.69□□□□□ -0.22
SMURF1-201ENST00000361125 TLX1NBP0CAT3 122 aa13.69□□□□□ -0.22
SMURF1-201ENST00000361125 LINC01600Q96MT4 127 aa13.69□□□□□ -0.22
SMURF1-201ENST00000361125 FAM104AQ969W3 186 aa13.69□□□□□ -0.22
SMURF1-201ENST00000361125 LOC101927531A0A1B0GV80 90 aa13.68□□□□□ -0.22
SMURF1-201ENST00000361125 C9orf163Q8N9P6 203 aa13.67□□□□□ -0.22
SMURF1-201ENST00000361125 PLA2G2DQ9UNK4 145 aa13.66□□□□□ -0.22
SMURF1-201ENST00000361125 C9orf92A6NGG3 77 aa13.66□□□□□ -0.22
SMURF1-201ENST00000361125 H7BZZ5 65 aa13.65□□□□□ -0.22
SMURF1-201ENST00000361125 LINC00304Q8N9R0 145 aa13.65□□□□□ -0.22
SMURF1-201ENST00000361125 F8P00451 2351 aa13.65□□□□□ -0.22
SMURF1-201ENST00000361125 MKI67P46013 3256 aaKnown RBP13.64□□□□□ -0.23
SMURF1-201ENST00000361125 C8orf17Q9NRJ1 99 aa13.64□□□□□ -0.23
SMURF1-201ENST00000361125 OBSCN-AS1Q96MR7 158 aa13.63□□□□□ -0.23
SMURF1-201ENST00000361125 PRR15Q8IV56 129 aa13.61□□□□□ -0.23
SMURF1-201ENST00000361125 PSORS1C2Q9UIG4 136 aa13.59□□□□□ -0.23
SMURF1-201ENST00000361125 EPG5Q9HCE0 2579 aa13.59□□□□□ -0.23
SMURF1-201ENST00000361125 A0A1B0GVX0 72 aa13.58□□□□□ -0.24
SMURF1-201ENST00000361125 IGLV7-43P04211 117 aa13.58□□□□□ -0.24
SMURF1-201ENST00000361125 COA5Q86WW8 74 aa13.58□□□□□ -0.24
SMURF1-201ENST00000361125 SSBP3-AS1Q7Z2R9 100 aa13.57□□□□□ -0.24
SMURF1-201ENST00000361125 A8MUN3 132 aa13.55□□□□□ -0.24
SMURF1-201ENST00000361125 CNBPP62633 177 aaKnown RBP13.54□□□□□ -0.24
SMURF1-201ENST00000361125 RANBP2P49792 3224 aaKnown RBP13.52□□□□□ -0.25
SMURF1-201ENST00000361125 BRCA2P51587 3418 aa13.51□□□□□ -0.25
SMURF1-201ENST00000361125 TRANK1O15050 2925 aa13.51□□□□□ -0.25
SMURF1-201ENST00000361125 SPRR4Q96PI1 79 aa13.51□□□□□ -0.25
SMURF1-201ENST00000361125 LINC00336Q6ZUF6 198 aa13.49□□□□□ -0.25
SMURF1-201ENST00000361125 HECTD1Q9ULT8 2610 aa13.48□□□□□ -0.25
SMURF1-201ENST00000361125 A0A1W2PNM2 257 aa13.47□□□□□ -0.25
SMURF1-201ENST00000361125 LAMA3Q16787 3333 aa13.45□□□□□ -0.26
SMURF1-201ENST00000361125 COX6B2Q6YFQ2 88 aa13.44□□□□□ -0.26
SMURF1-201ENST00000361125 CYP4F30PQ9H0H9 118 aa13.4□□□□□ -0.26
SMURF1-201ENST00000361125 TNP2Q05952 138 aa13.38□□□□□ -0.27
SMURF1-201ENST00000361125 IGLV5-37A0A075B6J1 123 aa13.38□□□□□ -0.27
SMURF1-201ENST00000361125 IGLV5-48A0A075B6I7 105 aa13.37□□□□□ -0.27
SMURF1-201ENST00000361125 CFAP54Q96N23 3096 aa13.36□□□□□ -0.27
SMURF1-201ENST00000361125 LAMA2P24043 3122 aaKnown RBP13.35□□□□□ -0.27
SMURF1-201ENST00000361125 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.3□□□□□ -0.28
SMURF1-201ENST00000361125 OCR1Q9BZK8 76 aa13.3□□□□□ -0.28
SMURF1-201ENST00000361125 UQCR11O14957 56 aa13.28□□□□□ -0.28
SMURF1-201ENST00000361125 UNC80Q8N2C7 3258 aa13.27□□□□□ -0.29
SMURF1-201ENST00000361125 Q8NDZ9 215 aa13.26□□□□□ -0.29
SMURF1-201ENST00000361125 Q8N1X5 172 aa13.24□□□□□ -0.29
SMURF1-201ENST00000361125 FLNBO75369 2602 aaKnown RBP13.23□□□□□ -0.29
SMURF1-201ENST00000361125 MIR22HGQ0VDD5 57 aa13.22□□□□□ -0.29
SMURF1-201ENST00000361125 SPANXA2-OT1Q8N9U9 137 aa13.22□□□□□ -0.29
SMURF1-201ENST00000361125 FLNAP21333 2647 aaKnown RBP13.21□□□□□ -0.29
SMURF1-201ENST00000361125 CYSTM1Q9H1C7 97 aa13.2□□□□□ -0.3
SMURF1-201ENST00000361125 CR1P17927 2039 aa13.2□□□□□ -0.3
SMURF1-201ENST00000361125 WIPF1O43516 503 aa13.18□□□□□ -0.3
SMURF1-201ENST00000361125 SPINT4Q6UDR6 99 aa13.18□□□□□ -0.3
SMURF1-201ENST00000361125 RBM12B-AS1Q9P1G2 102 aa13.15□□□□□ -0.3
SMURF1-201ENST00000361125 ITPR3Q14573 2671 aa13.14□□□□□ -0.31
SMURF1-201ENST00000361125 PRR26Q8N8Z3 221 aa13.14□□□□□ -0.31
SMURF1-201ENST00000361125 CDH23Q9H251 3354 aa13.14□□□□□ -0.31
SMURF1-201ENST00000361125 MGAM2Q2M2H8 2515 aa13.13□□□□□ -0.31
SMURF1-201ENST00000361125 USP24Q9UPU5 2620 aa13.12□□□□□ -0.31
SMURF1-201ENST00000361125 MGAQ8IWI9 3026 aa13.09□□□□□ -0.31
SMURF1-201ENST00000361125 Q1T7F1 81 aa13.09□□□□□ -0.31
SMURF1-201ENST00000361125 TRIOO75962 3097 aa13.08□□□□□ -0.32
SMURF1-201ENST00000361125 Q5XG85 94 aa13.08□□□□□ -0.32
SMURF1-201ENST00000361125 CD164Q04900 197 aa13.06□□□□□ -0.32
SMURF1-201ENST00000361125 LINC01554Q52M75 96 aa13.06□□□□□ -0.32
SMURF1-201ENST00000361125 A0A0D9SG42 100 aa13.06□□□□□ -0.32
SMURF1-201ENST00000361125 PRUNE2Q8WUY3 3088 aa13.06□□□□□ -0.32
SMURF1-201ENST00000361125 KTN1-AS1Q86SY8 53 aa13.04□□□□□ -0.32
SMURF1-201ENST00000361125 FAM229BQ4G0N7 80 aa13.02□□□□□ -0.33
SMURF1-201ENST00000361125 PLAC8Q9NZF1 115 aa13.01□□□□□ -0.33
SMURF1-201ENST00000361125 XIRP2A4UGR9 3374 aa13□□□□□ -0.33
SMURF1-201ENST00000361125 CRIPTQ9P021 101 aa13□□□□□ -0.33
SMURF1-201ENST00000361125 IGLV7-46A0A075B6I9 117 aa12.98□□□□□ -0.33
SMURF1-201ENST00000361125 CDC42SE1Q9NRR8 79 aa12.98□□□□□ -0.33
SMURF1-201ENST00000361125 DNAH14Q0VDD8 3507 aa12.98□□□□□ -0.33
SMURF1-201ENST00000361125 HELZ2Q9BYK8 2649 aaKnown RBP12.97□□□□□ -0.33
SMURF1-201ENST00000361125 SPRR1AP35321 89 aa12.97□□□□□ -0.33
SMURF1-201ENST00000361125 WDFY4Q6ZS81 3184 aa12.96□□□□□ -0.33
SMURF1-201ENST00000361125 KRTAP1-5Q9BYS1 174 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms