RNA–Protein interactions for RNA: ENST00000360001.10

SDF4-202, Transcript of stromal cell derived factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SDF4, Length 1,956 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-202ENST00000360001 CBY1Q9Y3M2 126 aa14.66□□□□□ -0.06
SDF4-202ENST00000360001 DIRC1Q969H9 104 aa14.65□□□□□ -0.06
SDF4-202ENST00000360001 A0A087WYN8 130 aa14.65□□□□□ -0.06
SDF4-202ENST00000360001 KMT2CQ8NEZ4 4911 aaKnown RBP14.65□□□□□ -0.06
SDF4-202ENST00000360001 C9JAW5 83 aa14.63□□□□□ -0.07
SDF4-202ENST00000360001 F8W1H4 67 aa14.62□□□□□ -0.07
SDF4-202ENST00000360001 TRACP01848 142 aa14.62□□□□□ -0.07
SDF4-202ENST00000360001 SMCPP49901 116 aaPredicted RBP14.6□□□□□ -0.07
SDF4-202ENST00000360001 TRBV7-6A0A0J9YX20 115 aa14.6□□□□□ -0.07
SDF4-202ENST00000360001 PRYO14603 147 aa14.6□□□□□ -0.07
SDF4-202ENST00000360001 EPM2AB3EWF7 344 aa14.58□□□□□ -0.07
SDF4-202ENST00000360001 ELOF1P60002 83 aaKnown RBP14.58□□□□□ -0.07
SDF4-202ENST00000360001 PHF5AQ7RTV0 110 aaKnown RBP14.58□□□□□ -0.07
SDF4-202ENST00000360001 DPH3Q96FX2 82 aa14.58□□□□□ -0.07
SDF4-202ENST00000360001 LINC00575Q6W349 94 aa14.58□□□□□ -0.08
SDF4-202ENST00000360001 SLC25A20O43772 301 aa14.57□□□□□ -0.08
SDF4-202ENST00000360001 COX7BP24311 80 aa14.57□□□□□ -0.08
SDF4-202ENST00000360001 SPRR1AP35321 89 aa14.57□□□□□ -0.08
SDF4-202ENST00000360001 A0A1B0GX51 115 aa14.56□□□□□ -0.08
SDF4-202ENST00000360001 KRTAP4-16G5E9R7 235 aaPredicted RBP14.55□□□□□ -0.08
SDF4-202ENST00000360001 DNAH8Q96JB1 4490 aa14.54□□□□□ -0.08
SDF4-202ENST00000360001 LINC00336Q6ZUF6 198 aa14.54□□□□□ -0.08
SDF4-202ENST00000360001 LINC00528Q8N1L1 170 aa14.53□□□□□ -0.08
SDF4-202ENST00000360001 DNAL4O96015 105 aa14.53□□□□□ -0.08
SDF4-202ENST00000360001 KRTAP11-1Q8IUC1 163 aa14.53□□□□□ -0.08
SDF4-202ENST00000360001 REG3GQ6UW15 175 aa14.51□□□□□ -0.09
SDF4-202ENST00000360001 ANKRD29Q8N6D5 301 aa14.51□□□□□ -0.09
SDF4-202ENST00000360001 LINC01600Q96MT4 127 aa14.51□□□□□ -0.09
SDF4-202ENST00000360001 PLAC8Q9NZF1 115 aa14.51□□□□□ -0.09
SDF4-202ENST00000360001 hADV29S1A0JD25 119 aa14.51□□□□□ -0.09
SDF4-202ENST00000360001 H3BT86 120 aa14.5□□□□□ -0.09
SDF4-202ENST00000360001 UBE2BP63146 152 aa14.5□□□□□ -0.09
SDF4-202ENST00000360001 B5MCH6 92 aa14.49□□□□□ -0.09
SDF4-202ENST00000360001 ETDCA0A1B0GVM5 59 aa14.48□□□□□ -0.09
SDF4-202ENST00000360001 SNCGO76070 127 aa14.47□□□□□ -0.09
SDF4-202ENST00000360001 KRTAP10-1P60331 282 aa14.47□□□□□ -0.09
SDF4-202ENST00000360001 ETDBQ3ZM63 59 aa14.47□□□□□ -0.09
SDF4-202ENST00000360001 Q6ZRX8 168 aa14.47□□□□□ -0.09
SDF4-202ENST00000360001 BAALC-AS2P0C853 105 aa14.47□□□□□ -0.09
SDF4-202ENST00000360001 FAM30AQ9NZY2 134 aa14.46□□□□□ -0.09
SDF4-202ENST00000360001 Q6ZSA8 131 aa14.44□□□□□ -0.1
SDF4-202ENST00000360001 Q9BRP9 147 aa14.43□□□□□ -0.1
SDF4-202ENST00000360001 ORMDL1Q9P0S3 153 aa14.43□□□□□ -0.1
SDF4-202ENST00000360001 INAFM2P0DMQ5 153 aa14.42□□□□□ -0.1
SDF4-202ENST00000360001 PKHD1P08F94 4074 aa14.42□□□□□ -0.1
SDF4-202ENST00000360001 A0A1B0GVY2 172 aa14.42□□□□□ -0.1
SDF4-202ENST00000360001 Q6ZQY7 126 aa14.42□□□□□ -0.1
SDF4-202ENST00000360001 TEN1Q86WV5 123 aa14.42□□□□□ -0.1
SDF4-202ENST00000360001 DHRS4-AS1Q9P1J3 65 aa14.4□□□□□ -0.1
SDF4-202ENST00000360001 FAM19A1Q7Z5A9 133 aa14.39□□□□□ -0.11
SDF4-202ENST00000360001 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP14.38□□□□□ -0.11
SDF4-202ENST00000360001 CIRBP-AS1Q8TBR5 109 aa14.38□□□□□ -0.11
SDF4-202ENST00000360001 PRLHP81277 87 aa14.36□□□□□ -0.11
SDF4-202ENST00000360001 RYR3Q15413 4870 aa14.35□□□□□ -0.11
SDF4-202ENST00000360001 SCXQ7RTU7 201 aa14.34□□□□□ -0.11
SDF4-202ENST00000360001 SMCR5Q8TEV8 140 aa14.34□□□□□ -0.11
SDF4-202ENST00000360001 LRP1BQ9NZR2 4599 aa14.34□□□□□ -0.11
SDF4-202ENST00000360001 TMEM256-PLSCR3K7ERE1 68 aa14.34□□□□□ -0.11
SDF4-202ENST00000360001 BCE1O60756 84 aa14.34□□□□□ -0.11
SDF4-202ENST00000360001 TEX49A0A1B0GTD5 131 aa14.33□□□□□ -0.12
SDF4-202ENST00000360001 ERC2-IT1O76042 136 aa14.33□□□□□ -0.12
SDF4-202ENST00000360001 H0Y9J4 135 aa14.32□□□□□ -0.12
SDF4-202ENST00000360001 OCIAD2Q56VL3 154 aa14.32□□□□□ -0.12
SDF4-202ENST00000360001 DYNC1H1Q14204 4646 aaKnown RBP14.31□□□□□ -0.12
SDF4-202ENST00000360001 PPDPFLQ8WWR9 84 aa14.31□□□□□ -0.12
SDF4-202ENST00000360001 PSORS1C2Q9UIG4 136 aa14.31□□□□□ -0.12
SDF4-202ENST00000360001 HAMPP81172 84 aa14.3□□□□□ -0.12
SDF4-202ENST00000360001 KRTAP13-1Q8IUC0 172 aa14.29□□□□□ -0.12
SDF4-202ENST00000360001 H3BQ85 93 aa14.28□□□□□ -0.12
SDF4-202ENST00000360001 UBE2AP49459 152 aa14.28□□□□□ -0.12
SDF4-202ENST00000360001 HIGD2AQ9BW72 106 aa14.27□□□□□ -0.12
SDF4-202ENST00000360001 ST20-AS1Q8NBB2 130 aa14.27□□□□□ -0.13
SDF4-202ENST00000360001 LINC01547P58512 204 aaPredicted RBP14.26□□□□□ -0.13
SDF4-202ENST00000360001 GHRHP01286 108 aa14.25□□□□□ -0.13
SDF4-202ENST00000360001 OBSCN-AS1Q96MR7 158 aa14.25□□□□□ -0.13
SDF4-202ENST00000360001 DEFB105AQ8NG35 78 aa14.23□□□□□ -0.13
SDF4-202ENST00000360001 C1orf137Q5JT78 98 aa14.23□□□□□ -0.13
SDF4-202ENST00000360001 Q8N377 158 aa14.23□□□□□ -0.13
SDF4-202ENST00000360001 IGLV5-48A0A075B6I7 105 aa14.22□□□□□ -0.13
SDF4-202ENST00000360001 SRRM2Q9UQ35 2752 aaKnown RBP14.21□□□□□ -0.13
SDF4-202ENST00000360001 K7ERU9 68 aa14.21□□□□□ -0.13
SDF4-202ENST00000360001 A0A1B0GV72 72 aa14.2□□□□□ -0.14
SDF4-202ENST00000360001 LAMTOR3Q9UHA4 124 aa14.2□□□□□ -0.14
SDF4-202ENST00000360001 JMJD7-PLA2G4BH0Y9G9 81 aa14.18□□□□□ -0.14
SDF4-202ENST00000360001 NDUFV3P56181 108 aaKnown RBP14.16□□□□□ -0.14
SDF4-202ENST00000360001 J3QR89 54 aa14.16□□□□□ -0.14
SDF4-202ENST00000360001 C14orf132Q9NPU4 83 aa14.16□□□□□ -0.14
SDF4-202ENST00000360001 APOBP04114 4563 aaKnown RBP14.14□□□□□ -0.15
SDF4-202ENST00000360001 ZNF861PO60384 105 aa14.14□□□□□ -0.15
SDF4-202ENST00000360001 IGLV7-43P04211 117 aa14.13□□□□□ -0.15
SDF4-202ENST00000360001 XGP55808 180 aa14.13□□□□□ -0.15
SDF4-202ENST00000360001 C3orf22Q8N5N4 141 aa14.13□□□□□ -0.15
SDF4-202ENST00000360001 RBM3P98179 157 aaKnown RBP14.11□□□□□ -0.15
SDF4-202ENST00000360001 SMIM29Q86T20 159 aa14.09□□□□□ -0.15
SDF4-202ENST00000360001 SPRR1BP22528 89 aa14.07□□□□□ -0.16
SDF4-202ENST00000360001 VPS13BQ7Z7G8 4022 aa14.07□□□□□ -0.16
SDF4-202ENST00000360001 GAGE2AQ6NT46 116 aa14.07□□□□□ -0.16
SDF4-202ENST00000360001 LOC110117498A0A087WWA1 95 aa14.04□□□□□ -0.16
SDF4-202ENST00000360001 SPRR4Q96PI1 79 aa14.04□□□□□ -0.16
SDF4-202ENST00000360001 DSCR8Q96T75 97 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms