RNA–Protein interactions for RNA: ENST00000359895.6

PDLIM7-203, Transcript of PDZ and LIM domain 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDLIM7, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-203ENST00000359895 PDE6GP18545 87 aa11.8□□□□□ -0.52
PDLIM7-203ENST00000359895 LINC00846Q9NV44 126 aa11.8□□□□□ -0.52
PDLIM7-203ENST00000359895 DNAH1Q9P2D7 4330 aa11.79□□□□□ -0.52
PDLIM7-203ENST00000359895 IGLV1-50A0A075B6I6 118 aa11.79□□□□□ -0.52
PDLIM7-203ENST00000359895 FAM168BA1KXE4 195 aa11.78□□□□□ -0.52
PDLIM7-203ENST00000359895 NDUFV3P56181 108 aaKnown RBP11.78□□□□□ -0.52
PDLIM7-203ENST00000359895 Q6JHZ5 121 aa11.78□□□□□ -0.52
PDLIM7-203ENST00000359895 DSCR8Q96T75 97 aa11.78□□□□□ -0.52
PDLIM7-203ENST00000359895 Q6ZQT0 140 aa11.77□□□□□ -0.53
PDLIM7-203ENST00000359895 ANAPC13Q9BS18 74 aa11.77□□□□□ -0.53
PDLIM7-203ENST00000359895 MRPL55Q7Z7F7 128 aaKnown RBP11.76□□□□□ -0.53
PDLIM7-203ENST00000359895 DHRS4-AS1Q9P1J3 65 aa11.75□□□□□ -0.53
PDLIM7-203ENST00000359895 NBDYA0A0U1RRE5 68 aa11.75□□□□□ -0.53
PDLIM7-203ENST00000359895 SPRR1AP35321 89 aa11.75□□□□□ -0.53
PDLIM7-203ENST00000359895 FAM19A5Q7Z5A7 132 aaPredicted RBP11.75□□□□□ -0.53
PDLIM7-203ENST00000359895 KRTAP7-1Q8IUC3 87 aa11.75□□□□□ -0.53
PDLIM7-203ENST00000359895 C16orf90A8MZG2 172 aa11.74□□□□□ -0.53
PDLIM7-203ENST00000359895 DYNC2H1Q8NCM8 4307 aaKnown RBP11.73□□□□□ -0.53
PDLIM7-203ENST00000359895 ETDCA0A1B0GVM5 59 aa11.73□□□□□ -0.53
PDLIM7-203ENST00000359895 RPL37AP8A6NKH3 93 aa11.73□□□□□ -0.53
PDLIM7-203ENST00000359895 PKIGQ9Y2B9 76 aa11.73□□□□□ -0.53
PDLIM7-203ENST00000359895 STAB2Q8WWQ8 2551 aa11.73□□□□□ -0.53
PDLIM7-203ENST00000359895 KRTAP4-16G5E9R7 235 aaPredicted RBP11.72□□□□□ -0.53
PDLIM7-203ENST00000359895 Q6ZRX8 168 aa11.72□□□□□ -0.53
PDLIM7-203ENST00000359895 B5MCH6 92 aa11.71□□□□□ -0.53
PDLIM7-203ENST00000359895 A0A096LNI7 61 aa11.7□□□□□ -0.54
PDLIM7-203ENST00000359895 ATP5EP2Q5VTU8 51 aa11.7□□□□□ -0.54
PDLIM7-203ENST00000359895 UBL5Q9BZL1 73 aa11.7□□□□□ -0.54
PDLIM7-203ENST00000359895 TRBV7-4A0A0J9YYF1 115 aa11.69□□□□□ -0.54
PDLIM7-203ENST00000359895 LRCOL1A6NCL2 159 aa11.67□□□□□ -0.54
PDLIM7-203ENST00000359895 REG3GQ6UW15 175 aa11.67□□□□□ -0.54
PDLIM7-203ENST00000359895 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.66□□□□□ -0.54
PDLIM7-203ENST00000359895 IGKV3D-7A0A0C4DH55 119 aa11.66□□□□□ -0.54
PDLIM7-203ENST00000359895 FAM236AA0A1B0GUQ0 79 aa11.66□□□□□ -0.54
PDLIM7-203ENST00000359895 FAM236BA0A1B0GV22 79 aa11.66□□□□□ -0.54
PDLIM7-203ENST00000359895 IGKV2-24A0A0C4DH68 120 aa11.65□□□□□ -0.54
PDLIM7-203ENST00000359895 Q6ZRN7 208 aaPredicted RBP11.64□□□□□ -0.55
PDLIM7-203ENST00000359895 Q9BRP9 147 aa11.64□□□□□ -0.55
PDLIM7-203ENST00000359895 DNAH7Q8WXX0 4024 aa11.64□□□□□ -0.55
PDLIM7-203ENST00000359895 C9orf163Q8N9P6 203 aa11.63□□□□□ -0.55
PDLIM7-203ENST00000359895 Q8N377 158 aa11.62□□□□□ -0.55
PDLIM7-203ENST00000359895 A0A1W2PNN7 141 aa11.61□□□□□ -0.55
PDLIM7-203ENST00000359895 LINC01547P58512 204 aaPredicted RBP11.61□□□□□ -0.55
PDLIM7-203ENST00000359895 DEFB105AQ8NG35 78 aa11.61□□□□□ -0.55
PDLIM7-203ENST00000359895 UBE2BP63146 152 aa11.6□□□□□ -0.55
PDLIM7-203ENST00000359895 IGLV5-48A0A075B6I7 105 aa11.59□□□□□ -0.55
PDLIM7-203ENST00000359895 M0R2N4 97 aa11.59□□□□□ -0.55
PDLIM7-203ENST00000359895 LINC00474Q9P2X8 69 aa11.59□□□□□ -0.55
PDLIM7-203ENST00000359895 HIST1H4AP62805 103 aaKnown RBP11.58□□□□□ -0.55
PDLIM7-203ENST00000359895 Q6ZVQ6 151 aa11.57□□□□□ -0.56
PDLIM7-203ENST00000359895 ATOX1O00244 68 aa11.54□□□□□ -0.56
PDLIM7-203ENST00000359895 CHTF8P0CG12 524 aa11.54□□□□□ -0.56
PDLIM7-203ENST00000359895 FAM19A1Q7Z5A9 133 aa11.54□□□□□ -0.56
PDLIM7-203ENST00000359895 SVIPQ8NHG7 77 aa11.54□□□□□ -0.56
PDLIM7-203ENST00000359895 WWC2-AS2Q96NR7 200 aa11.54□□□□□ -0.56
PDLIM7-203ENST00000359895 ERC2-IT1O76042 136 aa11.53□□□□□ -0.56
PDLIM7-203ENST00000359895 ST20-AS1Q8NBB2 130 aa11.53□□□□□ -0.56
PDLIM7-203ENST00000359895 STARD9Q9P2P6 4700 aa11.53□□□□□ -0.56
PDLIM7-203ENST00000359895 CSMD3Q7Z407 3707 aa11.52□□□□□ -0.56
PDLIM7-203ENST00000359895 A0A1B0GW54 56 aa11.52□□□□□ -0.57
PDLIM7-203ENST00000359895 CXCL6P80162 114 aa11.52□□□□□ -0.57
PDLIM7-203ENST00000359895 HAMPP81172 84 aa11.5□□□□□ -0.57
PDLIM7-203ENST00000359895 TNP2Q05952 138 aa11.5□□□□□ -0.57
PDLIM7-203ENST00000359895 Q6ZR54 194 aa11.5□□□□□ -0.57
PDLIM7-203ENST00000359895 PHF5AQ7RTV0 110 aaKnown RBP11.5□□□□□ -0.57
PDLIM7-203ENST00000359895 A0A087WTM6 91 aa11.5□□□□□ -0.57
PDLIM7-203ENST00000359895 A0A087WVE0 104 aa11.5□□□□□ -0.57
PDLIM7-203ENST00000359895 CCDC179H3BU77 68 aa11.5□□□□□ -0.57
PDLIM7-203ENST00000359895 H0Y9J4 135 aa11.49□□□□□ -0.57
PDLIM7-203ENST00000359895 LYSTQ99698 3801 aa11.48□□□□□ -0.57
PDLIM7-203ENST00000359895 FUSP35637 526 aaKnown RBP eCLIP11.47□□□□□ -0.57
PDLIM7-203ENST00000359895 C3orf22Q8N5N4 141 aa11.47□□□□□ -0.57
PDLIM7-203ENST00000359895 PRLHP81277 87 aa11.46□□□□□ -0.57
PDLIM7-203ENST00000359895 C1orf137Q5JT78 98 aa11.46□□□□□ -0.57
PDLIM7-203ENST00000359895 DNAH10Q8IVF4 4471 aa11.45□□□□□ -0.58
PDLIM7-203ENST00000359895 PLECQ15149 4684 aaKnown RBP11.45□□□□□ -0.58
PDLIM7-203ENST00000359895 KMT2CQ8NEZ4 4911 aaKnown RBP11.45□□□□□ -0.58
PDLIM7-203ENST00000359895 F8WEM9 126 aa11.45□□□□□ -0.58
PDLIM7-203ENST00000359895 UQCRQO14949 82 aa11.44□□□□□ -0.58
PDLIM7-203ENST00000359895 NREPQ16612 68 aa11.43□□□□□ -0.58
PDLIM7-203ENST00000359895 SMIM29Q86T20 159 aa11.43□□□□□ -0.58
PDLIM7-203ENST00000359895 SPACA4Q8TDM5 124 aa11.43□□□□□ -0.58
PDLIM7-203ENST00000359895 DPH3Q96FX2 82 aa11.43□□□□□ -0.58
PDLIM7-203ENST00000359895 HIGD2AQ9BW72 106 aa11.43□□□□□ -0.58
PDLIM7-203ENST00000359895 VPS13DQ5THJ4 4388 aa11.43□□□□□ -0.58
PDLIM7-203ENST00000359895 EPM2AB3EWF7 344 aa11.42□□□□□ -0.58
PDLIM7-203ENST00000359895 COX7CP15954 63 aa11.42□□□□□ -0.58
PDLIM7-203ENST00000359895 Q8NBF4 154 aa11.42□□□□□ -0.58
PDLIM7-203ENST00000359895 KRTAP11-1Q8IUC1 163 aa11.41□□□□□ -0.58
PDLIM7-203ENST00000359895 A0A1W2PNM2 257 aa11.41□□□□□ -0.58
PDLIM7-203ENST00000359895 C1orf134Q5TEV5 83 aa11.41□□□□□ -0.58
PDLIM7-203ENST00000359895 UBE2AP49459 152 aa11.4□□□□□ -0.58
PDLIM7-203ENST00000359895 TENM2Q9NT68 2774 aa11.39□□□□□ -0.59
PDLIM7-203ENST00000359895 C3orf84H3BNL1 204 aa11.39□□□□□ -0.59
PDLIM7-203ENST00000359895 PANO1I0J062 215 aa11.39□□□□□ -0.59
PDLIM7-203ENST00000359895 RTL8CO15255 209 aa11.39□□□□□ -0.59
PDLIM7-203ENST00000359895 BCE1O60756 84 aa11.39□□□□□ -0.59
PDLIM7-203ENST00000359895 SERP2Q8N6R1 65 aa11.39□□□□□ -0.59
PDLIM7-203ENST00000359895 SPRR4Q96PI1 79 aa11.39□□□□□ -0.59
PDLIM7-203ENST00000359895 IGLV8-61A0A075B6I0 122 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms