RNA–Protein interactions for RNA: ENST00000357867.8

FN1-205, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,898 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-205ENST00000357867 TRAV22A0A0B4J277 110 aa7.38□□□□□ -1.23
FN1-205ENST00000357867 LINC00310P59036 64 aa7.38□□□□□ -1.23
FN1-205ENST00000357867 A0A0U1RQV1 116 aa7.38□□□□□ -1.23
FN1-205ENST00000357867 CELSR3Q9NYQ7 3312 aa7.37□□□□□ -1.23
FN1-205ENST00000357867 ZNF861PO60384 105 aa7.37□□□□□ -1.23
FN1-205ENST00000357867 ZNF292O60281 2723 aa7.36□□□□□ -1.23
FN1-205ENST00000357867 A0A1B0GU69 56 aa7.36□□□□□ -1.23
FN1-205ENST00000357867 ST20-AS1Q8NBB2 130 aa7.36□□□□□ -1.23
FN1-205ENST00000357867 LINC00846Q9NV44 126 aa7.36□□□□□ -1.23
FN1-205ENST00000357867 FAM168BA1KXE4 195 aa7.36□□□□□ -1.23
FN1-205ENST00000357867 SETXQ7Z333 2677 aaKnown RBP7.36□□□□□ -1.23
FN1-205ENST00000357867 TMEM254Q8TBM7 123 aa7.35□□□□□ -1.23
FN1-205ENST00000357867 TRIOO75962 3097 aa7.35□□□□□ -1.23
FN1-205ENST00000357867 HTTP42858 3142 aa7.34□□□□□ -1.23
FN1-205ENST00000357867 CDH23Q9H251 3354 aa7.34□□□□□ -1.23
FN1-205ENST00000357867 TRBV7-4A0A0J9YYF1 115 aa7.34□□□□□ -1.23
FN1-205ENST00000357867 H3BPC8 53 aa7.34□□□□□ -1.23
FN1-205ENST00000357867 SMIM29Q86T20 159 aa7.34□□□□□ -1.23
FN1-205ENST00000357867 IGLV6-57P01721 117 aa7.34□□□□□ -1.23
FN1-205ENST00000357867 KRTAP10-3P60369 221 aa7.33□□□□□ -1.24
FN1-205ENST00000357867 SMR3BP02814 79 aaPredicted RBP7.33□□□□□ -1.24
FN1-205ENST00000357867 SSBP3-AS1Q7Z2R9 100 aa7.33□□□□□ -1.24
FN1-205ENST00000357867 Q9UF83 564 aa7.33□□□□□ -1.24
FN1-205ENST00000357867 NBEAL1Q6ZS30 2694 aa7.33□□□□□ -1.24
FN1-205ENST00000357867 A0A087WVE0 104 aa7.33□□□□□ -1.24
FN1-205ENST00000357867 MAP1AP78559 2803 aaPredicted RBP7.32□□□□□ -1.24
FN1-205ENST00000357867 LOC110117498A0A087WWA1 95 aa7.32□□□□□ -1.24
FN1-205ENST00000357867 RBM12B-AS1Q9P1G2 102 aa7.32□□□□□ -1.24
FN1-205ENST00000357867 WDFY4Q6ZS81 3184 aa7.32□□□□□ -1.24
FN1-205ENST00000357867 CCDC179H3BU77 68 aa7.32□□□□□ -1.24
FN1-205ENST00000357867 KRTAP1-3Q8IUG1 177 aa7.31□□□□□ -1.24
FN1-205ENST00000357867 COL6A5A8TX70 2615 aa7.3□□□□□ -1.24
FN1-205ENST00000357867 VPREB1P12018 145 aa7.3□□□□□ -1.24
FN1-205ENST00000357867 A8MWP4 228 aa7.3□□□□□ -1.24
FN1-205ENST00000357867 PMAIP1Q13794 54 aa7.29□□□□□ -1.24
FN1-205ENST00000357867 Q6ZQT0 140 aa7.29□□□□□ -1.24
FN1-205ENST00000357867 PRR34Q9NV39 138 aa7.29□□□□□ -1.24
FN1-205ENST00000357867 C9orf163Q8N9P6 203 aa7.29□□□□□ -1.24
FN1-205ENST00000357867 KCNQ1DNQ9H478 68 aa7.29□□□□□ -1.24
FN1-205ENST00000357867 IGLV1-50A0A075B6I6 118 aa7.28□□□□□ -1.24
FN1-205ENST00000357867 SERTAD4-AS1Q5TG53 156 aa7.28□□□□□ -1.24
FN1-205ENST00000357867 SOSTDC1Q6X4U4 206 aa7.28□□□□□ -1.24
FN1-205ENST00000357867 PSPHP1O15172 72 aa7.27□□□□□ -1.24
FN1-205ENST00000357867 APLNQ9ULZ1 77 aa7.27□□□□□ -1.25
FN1-205ENST00000357867 PLA2G2DQ9UNK4 145 aa7.27□□□□□ -1.25
FN1-205ENST00000357867 LOC101927531A0A1B0GV80 90 aa7.27□□□□□ -1.25
FN1-205ENST00000357867 FRYLO94915 3013 aa7.27□□□□□ -1.25
FN1-205ENST00000357867 TLX1NBP0CAT3 122 aa7.26□□□□□ -1.25
FN1-205ENST00000357867 LINC00528Q8N1L1 170 aa7.26□□□□□ -1.25
FN1-205ENST00000357867 C15orf56Q8N910 161 aa7.26□□□□□ -1.25
FN1-205ENST00000357867 IGLV7-43P04211 117 aa7.26□□□□□ -1.25
FN1-205ENST00000357867 DNAH14Q0VDD8 3507 aa7.26□□□□□ -1.25
FN1-205ENST00000357867 DSPP15924 2871 aaKnown RBP7.26□□□□□ -1.25
FN1-205ENST00000357867 MRPL34Q9BQ48 92 aaKnown RBP7.25□□□□□ -1.25
FN1-205ENST00000357867 ZNF575Q86XF7 245 aa7.25□□□□□ -1.25
FN1-205ENST00000357867 CASC10Q5T4H9 136 aa7.25□□□□□ -1.25
FN1-205ENST00000357867 C9orf92A6NGG3 77 aa7.24□□□□□ -1.25
FN1-205ENST00000357867 OBSCN-AS1Q96MR7 158 aa7.24□□□□□ -1.25
FN1-205ENST00000357867 CHD9Q3L8U1 2897 aa7.24□□□□□ -1.25
FN1-205ENST00000357867 DMBT1Q9UGM3 2413 aaPredicted RBP7.23□□□□□ -1.25
FN1-205ENST00000357867 USP34Q70CQ2 3546 aa7.23□□□□□ -1.25
FN1-205ENST00000357867 CNBPP62633 177 aaKnown RBP7.23□□□□□ -1.25
FN1-205ENST00000357867 KRTAP1-1Q07627 177 aa7.22□□□□□ -1.25
FN1-205ENST00000357867 FAM218AQ96MZ4 157 aa7.22□□□□□ -1.25
FN1-205ENST00000357867 GIG44P09565 113 aaPredicted RBP7.21□□□□□ -1.25
FN1-205ENST00000357867 PSORS1C2Q9UIG4 136 aa7.21□□□□□ -1.25
FN1-205ENST00000357867 LINC00612Q8N6U2 182 aa7.21□□□□□ -1.26
FN1-205ENST00000357867 LAMA1P25391 3075 aa7.21□□□□□ -1.26
FN1-205ENST00000357867 IGLV5-37A0A075B6J1 123 aa7.19□□□□□ -1.26
FN1-205ENST00000357867 C1orf195Q5TG92 126 aa7.18□□□□□ -1.26
FN1-205ENST00000357867 C9orf129Q5T035 196 aaKnown RBP7.18□□□□□ -1.26
FN1-205ENST00000357867 FRYQ5TBA9 3013 aa7.17□□□□□ -1.26
FN1-205ENST00000357867 DSCR10P59022 87 aa7.17□□□□□ -1.26
FN1-205ENST00000357867 GCN1Q92616 2671 aaKnown RBP7.17□□□□□ -1.26
FN1-205ENST00000357867 A0A1B0GVX0 72 aa7.17□□□□□ -1.26
FN1-205ENST00000357867 IGFL1Q6UW32 110 aa7.16□□□□□ -1.26
FN1-205ENST00000357867 REV3LO60673 3130 aa7.16□□□□□ -1.26
FN1-205ENST00000357867 IGLV8-61A0A075B6I0 122 aa7.15□□□□□ -1.26
FN1-205ENST00000357867 K7EQZ3 153 aa7.14□□□□□ -1.27
FN1-205ENST00000357867 PRR15Q8IV56 129 aa7.13□□□□□ -1.27
FN1-205ENST00000357867 IGSF10Q6WRI0 2623 aa7.12□□□□□ -1.27
FN1-205ENST00000357867 SPRR4Q96PI1 79 aa7.12□□□□□ -1.27
FN1-205ENST00000357867 C8orf17Q9NRJ1 99 aa7.12□□□□□ -1.27
FN1-205ENST00000357867 TNP2Q05952 138 aa7.12□□□□□ -1.27
FN1-205ENST00000357867 A0A1W2PNN7 141 aa7.12□□□□□ -1.27
FN1-205ENST00000357867 Q8N377 158 aa7.11□□□□□ -1.27
FN1-205ENST00000357867 Q6ZSA8 131 aa7.11□□□□□ -1.27
FN1-205ENST00000357867 SZT2Q5T011 3432 aa7.1□□□□□ -1.27
FN1-205ENST00000357867 M0R2T5 61 aa7.1□□□□□ -1.27
FN1-205ENST00000357867 NOTCH1P46531 2555 aa7.09□□□□□ -1.27
FN1-205ENST00000357867 ANAPC11Q9NYG5 84 aa7.09□□□□□ -1.27
FN1-205ENST00000357867 WIPF1O43516 503 aa7.08□□□□□ -1.28
FN1-205ENST00000357867 COL6A3P12111 3177 aa7.08□□□□□ -1.28
FN1-205ENST00000357867 LITAFQ99732 161 aa7.08□□□□□ -1.28
FN1-205ENST00000357867 STAB2Q8WWQ8 2551 aa7.08□□□□□ -1.28
FN1-205ENST00000357867 IGLV7-46A0A075B6I9 117 aa7.07□□□□□ -1.28
FN1-205ENST00000357867 CRYBG3Q68DQ2 2970 aa7.07□□□□□ -1.28
FN1-205ENST00000357867 LRBAP50851 2863 aa7.06□□□□□ -1.28
FN1-205ENST00000357867 ERC2-IT1O76042 136 aa7.06□□□□□ -1.28
FN1-205ENST00000357867 CD164Q04900 197 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms