RNA–Protein interactions for RNA: ENST00000356083.7

COL27A1-201, Transcript of collagen type XXVII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL27A1, Length 7,790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-201ENST00000356083 FAM218AQ96MZ4 157 aa11.69□□□□□ -0.54
COL27A1-201ENST00000356083 ANAPC11Q9NYG5 84 aa11.69□□□□□ -0.54
COL27A1-201ENST00000356083 COA5Q86WW8 74 aa11.69□□□□□ -0.54
COL27A1-201ENST00000356083 XIRP2A4UGR9 3374 aa11.69□□□□□ -0.54
COL27A1-201ENST00000356083 DNAH10OSP0CZ25 163 aa11.68□□□□□ -0.54
COL27A1-201ENST00000356083 IGLV5-48A0A075B6I7 105 aa11.67□□□□□ -0.54
COL27A1-201ENST00000356083 PRO3102Q9H379 93 aa11.67□□□□□ -0.54
COL27A1-201ENST00000356083 A8MWP4 228 aa11.66□□□□□ -0.54
COL27A1-201ENST00000356083 LOC101927531A0A1B0GV80 90 aa11.64□□□□□ -0.55
COL27A1-201ENST00000356083 LINC00310P59036 64 aa11.63□□□□□ -0.55
COL27A1-201ENST00000356083 A8MUN3 132 aa11.62□□□□□ -0.55
COL27A1-201ENST00000356083 H3BPC8 53 aa11.61□□□□□ -0.55
COL27A1-201ENST00000356083 IGLV5-45A0A087WSX0 123 aa11.61□□□□□ -0.55
COL27A1-201ENST00000356083 STAB1Q9NY15 2570 aa11.6□□□□□ -0.55
COL27A1-201ENST00000356083 A0A096LNJ9 63 aa11.6□□□□□ -0.55
COL27A1-201ENST00000356083 A0A0G2JQZ4 141 aa11.59□□□□□ -0.55
COL27A1-201ENST00000356083 A0A1W2PNN7 141 aa11.59□□□□□ -0.55
COL27A1-201ENST00000356083 Q8N1X5 172 aa11.59□□□□□ -0.55
COL27A1-201ENST00000356083 CEP295Q9C0D2 2601 aa11.58□□□□□ -0.56
COL27A1-201ENST00000356083 REV3LO60673 3130 aa11.58□□□□□ -0.56
COL27A1-201ENST00000356083 CAMK2N1Q7Z7J9 78 aa11.57□□□□□ -0.56
COL27A1-201ENST00000356083 Q8NAQ8 132 aa11.55□□□□□ -0.56
COL27A1-201ENST00000356083 H3BNG1 76 aa11.54□□□□□ -0.56
COL27A1-201ENST00000356083 FREM2Q5SZK8 3169 aa11.54□□□□□ -0.56
COL27A1-201ENST00000356083 CDC42SE1Q9NRR8 79 aa11.53□□□□□ -0.56
COL27A1-201ENST00000356083 IGLV1-50A0A075B6I6 118 aa11.52□□□□□ -0.56
COL27A1-201ENST00000356083 GVQW2A0A096LPI5 108 aaPredicted RBP11.52□□□□□ -0.57
COL27A1-201ENST00000356083 ZNF861PO60384 105 aa11.5□□□□□ -0.57
COL27A1-201ENST00000356083 LOC110117498A0A087WWA1 95 aa11.48□□□□□ -0.57
COL27A1-201ENST00000356083 C15orf56Q8N910 161 aa11.48□□□□□ -0.57
COL27A1-201ENST00000356083 FLNBO75369 2602 aaKnown RBP11.48□□□□□ -0.57
COL27A1-201ENST00000356083 DMBT1Q9UGM3 2413 aaPredicted RBP11.47□□□□□ -0.57
COL27A1-201ENST00000356083 A0A1B0GW54 56 aa11.47□□□□□ -0.57
COL27A1-201ENST00000356083 Q6ZSA8 131 aa11.47□□□□□ -0.57
COL27A1-201ENST00000356083 LINC00336Q6ZUF6 198 aa11.47□□□□□ -0.57
COL27A1-201ENST00000356083 IGFL1Q6UW32 110 aa11.46□□□□□ -0.58
COL27A1-201ENST00000356083 C8orf17Q9NRJ1 99 aa11.46□□□□□ -0.58
COL27A1-201ENST00000356083 A0A0C4DFX4 3053 aa11.46□□□□□ -0.58
COL27A1-201ENST00000356083 COX8CQ7Z4L0 72 aa11.45□□□□□ -0.58
COL27A1-201ENST00000356083 A0A1B0GVX0 72 aa11.44□□□□□ -0.58
COL27A1-201ENST00000356083 PRR15Q8IV56 129 aa11.43□□□□□ -0.58
COL27A1-201ENST00000356083 LINC00483Q53H64 154 aa11.43□□□□□ -0.58
COL27A1-201ENST00000356083 CELSR3Q9NYQ7 3312 aa11.41□□□□□ -0.58
COL27A1-201ENST00000356083 K7EIL1 84 aa11.4□□□□□ -0.58
COL27A1-201ENST00000356083 WIPF1O43516 503 aa11.4□□□□□ -0.58
COL27A1-201ENST00000356083 KRTAP10-11P60412 298 aa11.39□□□□□ -0.59
COL27A1-201ENST00000356083 SMCPP49901 116 aaPredicted RBP11.39□□□□□ -0.59
COL27A1-201ENST00000356083 CENPEQ02224 2701 aa11.39□□□□□ -0.59
COL27A1-201ENST00000356083 COL4A2P08572 1712 aa11.38□□□□□ -0.59
COL27A1-201ENST00000356083 A0A087WTM6 91 aa11.38□□□□□ -0.59
COL27A1-201ENST00000356083 LINC00528Q8N1L1 170 aa11.38□□□□□ -0.59
COL27A1-201ENST00000356083 CYP4F30PQ9H0H9 118 aa11.37□□□□□ -0.59
COL27A1-201ENST00000356083 ITPR3Q14573 2671 aa11.36□□□□□ -0.59
COL27A1-201ENST00000356083 FAM104AQ969W3 186 aa11.34□□□□□ -0.59
COL27A1-201ENST00000356083 PSORS1C2Q9UIG4 136 aa11.34□□□□□ -0.59
COL27A1-201ENST00000356083 IGLV7-43P04211 117 aa11.32□□□□□ -0.6
COL27A1-201ENST00000356083 ERC2-IT1O76042 136 aa11.32□□□□□ -0.6
COL27A1-201ENST00000356083 RPS28P62857 69 aaKnown RBP11.32□□□□□ -0.6
COL27A1-201ENST00000356083 CHD6Q8TD26 2715 aa11.31□□□□□ -0.6
COL27A1-201ENST00000356083 TLX1NBP0CAT3 122 aa11.31□□□□□ -0.6
COL27A1-201ENST00000356083 Q8N377 158 aa11.3□□□□□ -0.6
COL27A1-201ENST00000356083 MKI67P46013 3256 aaKnown RBP11.28□□□□□ -0.6
COL27A1-201ENST00000356083 CD164Q04900 197 aa11.27□□□□□ -0.6
COL27A1-201ENST00000356083 TEX15Q9BXT5 2789 aa11.27□□□□□ -0.61
COL27A1-201ENST00000356083 NBEAL1Q6ZS30 2694 aa11.27□□□□□ -0.61
COL27A1-201ENST00000356083 IGLV7-46A0A075B6I9 117 aa11.26□□□□□ -0.61
COL27A1-201ENST00000356083 KCNQ1DNQ9H478 68 aa11.26□□□□□ -0.61
COL27A1-201ENST00000356083 PLA2G2DQ9UNK4 145 aa11.25□□□□□ -0.61
COL27A1-201ENST00000356083 TRIOO75962 3097 aa11.24□□□□□ -0.61
COL27A1-201ENST00000356083 PRR26Q8N8Z3 221 aa11.23□□□□□ -0.61
COL27A1-201ENST00000356083 LINC01546A6NGU7 62 aa11.23□□□□□ -0.61
COL27A1-201ENST00000356083 BAHCC1Q9P281 2608 aa11.21□□□□□ -0.61
COL27A1-201ENST00000356083 C9orf163Q8N9P6 203 aa11.19□□□□□ -0.62
COL27A1-201ENST00000356083 KTN1-AS1Q86SY8 53 aa11.17□□□□□ -0.62
COL27A1-201ENST00000356083 Q1T7F1 81 aa11.17□□□□□ -0.62
COL27A1-201ENST00000356083 LCA10Q71F78 164 aa11.15□□□□□ -0.62
COL27A1-201ENST00000356083 RANBP2P49792 3224 aaKnown RBP11.15□□□□□ -0.62
COL27A1-201ENST00000356083 FLNAP21333 2647 aaKnown RBP11.15□□□□□ -0.62
COL27A1-201ENST00000356083 BRCA2P51587 3418 aa11.15□□□□□ -0.62
COL27A1-201ENST00000356083 PRO0461Q9UI25 63 aa11.13□□□□□ -0.63
COL27A1-201ENST00000356083 LINC00612Q8N6U2 182 aa11.13□□□□□ -0.63
COL27A1-201ENST00000356083 CASC10Q5T4H9 136 aa11.12□□□□□ -0.63
COL27A1-201ENST00000356083 COL6A5A8TX70 2615 aa11.12□□□□□ -0.63
COL27A1-201ENST00000356083 HRES1P13985 223 aa11.11□□□□□ -0.63
COL27A1-201ENST00000356083 SPRR4Q96PI1 79 aa11.11□□□□□ -0.63
COL27A1-201ENST00000356083 UNC80Q8N2C7 3258 aa11.1□□□□□ -0.63
COL27A1-201ENST00000356083 STAB2Q8WWQ8 2551 aa11.09□□□□□ -0.63
COL27A1-201ENST00000356083 KRTAP10-3P60369 221 aa11.09□□□□□ -0.63
COL27A1-201ENST00000356083 A0A1B0GU33 70 aa11.09□□□□□ -0.63
COL27A1-201ENST00000356083 TNP2Q05952 138 aa11.09□□□□□ -0.63
COL27A1-201ENST00000356083 VPS13AQ96RL7 3174 aa11.08□□□□□ -0.64
COL27A1-201ENST00000356083 S4R3F8 94 aa11.07□□□□□ -0.64
COL27A1-201ENST00000356083 HELZ2Q9BYK8 2649 aaKnown RBP11.05□□□□□ -0.64
COL27A1-201ENST00000356083 DNAH14Q0VDD8 3507 aa11.05□□□□□ -0.64
COL27A1-201ENST00000356083 EIF4EBP3O60516 100 aaPredicted RBP11.04□□□□□ -0.64
COL27A1-201ENST00000356083 UNC79Q9P2D8 2635 aa11.04□□□□□ -0.64
COL27A1-201ENST00000356083 PRUNE2Q8WUY3 3088 aa11.03□□□□□ -0.64
COL27A1-201ENST00000356083 CDH23Q9H251 3354 aa11.03□□□□□ -0.64
COL27A1-201ENST00000356083 R4GN34 69 aa11.03□□□□□ -0.64
COL27A1-201ENST00000356083 LITAFQ99732 161 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 235.1 ms