RNA–Protein interactions for RNA: ENST00000354193.4

SVIP-201, Transcript of small VCP interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SVIP, Length 4,541 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-201ENST00000354193 XGP55808 180 aa7.17□□□□□ -1.26
SVIP-201ENST00000354193 SCGB1A1P11684 91 aa7.16□□□□□ -1.26
SVIP-201ENST00000354193 SCXQ7RTU7 201 aa7.16□□□□□ -1.26
SVIP-201ENST00000354193 C3orf84H3BNL1 204 aa7.16□□□□□ -1.26
SVIP-201ENST00000354193 ST20-AS1Q8NBB2 130 aa7.16□□□□□ -1.26
SVIP-201ENST00000354193 REG3GQ6UW15 175 aa7.15□□□□□ -1.26
SVIP-201ENST00000354193 RTL8CO15255 209 aa7.15□□□□□ -1.27
SVIP-201ENST00000354193 JMJD7-PLA2G4BH0Y9G9 81 aa7.14□□□□□ -1.27
SVIP-201ENST00000354193 A0A087WTM6 91 aa7.14□□□□□ -1.27
SVIP-201ENST00000354193 C16orf90A8MZG2 172 aa7.13□□□□□ -1.27
SVIP-201ENST00000354193 UBL5Q9BZL1 73 aa7.13□□□□□ -1.27
SVIP-201ENST00000354193 CCKP06307 115 aa7.13□□□□□ -1.27
SVIP-201ENST00000354193 TNP2Q05952 138 aa7.13□□□□□ -1.27
SVIP-201ENST00000354193 SDIM1Q6ZPB5 146 aa7.13□□□□□ -1.27
SVIP-201ENST00000354193 NDUFV3P56181 108 aaKnown RBP7.12□□□□□ -1.27
SVIP-201ENST00000354193 A0A0G2JQZ4 141 aa7.11□□□□□ -1.27
SVIP-201ENST00000354193 C9orf163Q8N9P6 203 aa7.11□□□□□ -1.27
SVIP-201ENST00000354193 ELOF1P60002 83 aaKnown RBP7.11□□□□□ -1.27
SVIP-201ENST00000354193 HUWE1Q7Z6Z7 4374 aaKnown RBP7.11□□□□□ -1.27
SVIP-201ENST00000354193 F8WDY8 70 aa7.11□□□□□ -1.27
SVIP-201ENST00000354193 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.1□□□□□ -1.27
SVIP-201ENST00000354193 CDIP1Q9H305 208 aa7.1□□□□□ -1.27
SVIP-201ENST00000354193 LINC00476Q8WZB0 136 aa7.1□□□□□ -1.27
SVIP-201ENST00000354193 SRRM2Q9UQ35 2752 aaKnown RBP7.1□□□□□ -1.27
SVIP-201ENST00000354193 IGLV9-49A0A0B4J1Y8 123 aa7.09□□□□□ -1.27
SVIP-201ENST00000354193 ERC2-IT1O76042 136 aa7.09□□□□□ -1.27
SVIP-201ENST00000354193 C1orf137Q5JT78 98 aa7.09□□□□□ -1.27
SVIP-201ENST00000354193 C9orf153Q5TBE3 101 aa7.09□□□□□ -1.27
SVIP-201ENST00000354193 HRCT1Q6UXD1 115 aa7.09□□□□□ -1.27
SVIP-201ENST00000354193 IGLV1-50A0A075B6I6 118 aa7.09□□□□□ -1.28
SVIP-201ENST00000354193 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.09□□□□□ -1.28
SVIP-201ENST00000354193 SMCR5Q8TEV8 140 aa7.08□□□□□ -1.28
SVIP-201ENST00000354193 LINC00846Q9NV44 126 aa7.08□□□□□ -1.28
SVIP-201ENST00000354193 DHRS4-AS1Q9P1J3 65 aa7.08□□□□□ -1.28
SVIP-201ENST00000354193 PANO1I0J062 215 aa7.08□□□□□ -1.28
SVIP-201ENST00000354193 ANAPC13Q9BS18 74 aa7.08□□□□□ -1.28
SVIP-201ENST00000354193 A0A1B0GX51 115 aa7.08□□□□□ -1.28
SVIP-201ENST00000354193 LINC00474Q9P2X8 69 aa7.08□□□□□ -1.28
SVIP-201ENST00000354193 PRYO14603 147 aa7.07□□□□□ -1.28
SVIP-201ENST00000354193 Q6ZRX8 168 aa7.07□□□□□ -1.28
SVIP-201ENST00000354193 LINC00528Q8N1L1 170 aa7.07□□□□□ -1.28
SVIP-201ENST00000354193 KCNQ1DNQ9H478 68 aa7.06□□□□□ -1.28
SVIP-201ENST00000354193 TLX1NBP0CAT3 122 aa7.06□□□□□ -1.28
SVIP-201ENST00000354193 ACYP1P07311 99 aa7.05□□□□□ -1.28
SVIP-201ENST00000354193 CNBPP62633 177 aaKnown RBP7.05□□□□□ -1.28
SVIP-201ENST00000354193 NREPQ16612 68 aa7.05□□□□□ -1.28
SVIP-201ENST00000354193 PKIGQ9Y2B9 76 aa7.05□□□□□ -1.28
SVIP-201ENST00000354193 FAM236AA0A1B0GUQ0 79 aa7.05□□□□□ -1.28
SVIP-201ENST00000354193 FAM236BA0A1B0GV22 79 aa7.05□□□□□ -1.28
SVIP-201ENST00000354193 EPM2AB3EWF7 344 aa7.05□□□□□ -1.28
SVIP-201ENST00000354193 A0A087WVE0 104 aa7.05□□□□□ -1.28
SVIP-201ENST00000354193 DEFB116Q30KQ4 102 aa7.04□□□□□ -1.28
SVIP-201ENST00000354193 ANAPC11Q9NYG5 84 aa7.04□□□□□ -1.28
SVIP-201ENST00000354193 LINC00643Q86TS7 51 aa7.03□□□□□ -1.28
SVIP-201ENST00000354193 Q9BRP9 147 aa7.02□□□□□ -1.28
SVIP-201ENST00000354193 PRKDCP78527 4128 aaKnown RBP7.02□□□□□ -1.29
SVIP-201ENST00000354193 B5MCH6 92 aa7.02□□□□□ -1.29
SVIP-201ENST00000354193 KRTAP7-1Q8IUC3 87 aa7.01□□□□□ -1.29
SVIP-201ENST00000354193 Q8N377 158 aa7□□□□□ -1.29
SVIP-201ENST00000354193 Q8N9L7 120 aa7□□□□□ -1.29
SVIP-201ENST00000354193 DNAH9Q9NYC9 4486 aa6.99□□□□□ -1.29
SVIP-201ENST00000354193 KRTAP10-2P60368 255 aa6.99□□□□□ -1.29
SVIP-201ENST00000354193 Q6ZRN7 208 aaPredicted RBP6.99□□□□□ -1.29
SVIP-201ENST00000354193 SMR3BP02814 79 aaPredicted RBP6.98□□□□□ -1.29
SVIP-201ENST00000354193 CMYA5Q8N3K9 4069 aa6.98□□□□□ -1.29
SVIP-201ENST00000354193 KRTAP11-1Q8IUC1 163 aa6.98□□□□□ -1.29
SVIP-201ENST00000354193 A0A087WSZ3 146 aa6.97□□□□□ -1.29
SVIP-201ENST00000354193 Q6ZR54 194 aa6.97□□□□□ -1.29
SVIP-201ENST00000354193 PSORS1C2Q9UIG4 136 aa6.97□□□□□ -1.29
SVIP-201ENST00000354193 FAM240AA0A1B0GVK7 77 aa6.96□□□□□ -1.29
SVIP-201ENST00000354193 BPY2O14599 106 aa6.96□□□□□ -1.29
SVIP-201ENST00000354193 PDE6GP18545 87 aa6.96□□□□□ -1.29
SVIP-201ENST00000354193 FLG2Q5D862 2391 aaPredicted RBP6.96□□□□□ -1.3
SVIP-201ENST00000354193 TRBV7-6A0A0J9YX20 115 aa6.96□□□□□ -1.3
SVIP-201ENST00000354193 Q6ZQT0 140 aa6.96□□□□□ -1.3
SVIP-201ENST00000354193 SPINK6Q6UWN8 80 aa6.96□□□□□ -1.3
SVIP-201ENST00000354193 H3BQ85 93 aa6.95□□□□□ -1.3
SVIP-201ENST00000354193 PLA2G2DQ9UNK4 145 aa6.95□□□□□ -1.3
SVIP-201ENST00000354193 Q6ZVQ6 151 aa6.95□□□□□ -1.3
SVIP-201ENST00000354193 LYSTQ99698 3801 aa6.95□□□□□ -1.3
SVIP-201ENST00000354193 FAM30AQ9NZY2 134 aa6.94□□□□□ -1.3
SVIP-201ENST00000354193 BCE1O60756 84 aa6.93□□□□□ -1.3
SVIP-201ENST00000354193 CIRBP-AS1Q8TBR5 109 aa6.93□□□□□ -1.3
SVIP-201ENST00000354193 DMBT1Q9UGM3 2413 aaPredicted RBP6.92□□□□□ -1.3
SVIP-201ENST00000354193 H0Y9J4 135 aa6.92□□□□□ -1.3
SVIP-201ENST00000354193 MOBPQ13875 183 aa6.92□□□□□ -1.3
SVIP-201ENST00000354193 SPACA4Q8TDM5 124 aa6.92□□□□□ -1.3
SVIP-201ENST00000354193 IGLV5-37A0A075B6J1 123 aa6.91□□□□□ -1.3
SVIP-201ENST00000354193 KRTAP21-3Q3LHN1 58 aa6.91□□□□□ -1.3
SVIP-201ENST00000354193 Q6JHZ5 121 aa6.91□□□□□ -1.3
SVIP-201ENST00000354193 PLECQ15149 4684 aaKnown RBP6.91□□□□□ -1.3
SVIP-201ENST00000354193 DNAH10Q8IVF4 4471 aa6.9□□□□□ -1.31
SVIP-201ENST00000354193 LINC01547P58512 204 aaPredicted RBP6.89□□□□□ -1.31
SVIP-201ENST00000354193 CDK2AP2O75956 126 aa6.89□□□□□ -1.31
SVIP-201ENST00000354193 WFDC13Q8IUB5 93 aa6.88□□□□□ -1.31
SVIP-201ENST00000354193 SPRR1AP35321 89 aa6.88□□□□□ -1.31
SVIP-201ENST00000354193 KRTAP10-1P60331 282 aa6.88□□□□□ -1.31
SVIP-201ENST00000354193 TRBV7-4A0A0J9YYF1 115 aa6.86□□□□□ -1.31
SVIP-201ENST00000354193 IGFL1Q6UW32 110 aa6.86□□□□□ -1.31
SVIP-201ENST00000354193 A0A1W2PNM2 257 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 98.6 ms