RNA–Protein interactions for RNA: ENST00000351808.9

IFT88-202, Transcript of intraflagellar transport 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IFT88, Length 2,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-202ENST00000351808 A0A1W2PNM2 257 aa8.71□□□□□ -1.02
IFT88-202ENST00000351808 A6NN06 94 aa8.71□□□□□ -1.02
IFT88-202ENST00000351808 CCL19Q99731 98 aa8.71□□□□□ -1.02
IFT88-202ENST00000351808 NDUFB1O75438 58 aa8.71□□□□□ -1.02
IFT88-202ENST00000351808 A6NED7 52 aa8.7□□□□□ -1.02
IFT88-202ENST00000351808 VPREB1P12018 145 aa8.7□□□□□ -1.02
IFT88-202ENST00000351808 PHF5AQ7RTV0 110 aaKnown RBP8.7□□□□□ -1.02
IFT88-202ENST00000351808 Q8N377 158 aa8.7□□□□□ -1.02
IFT88-202ENST00000351808 POLQO75417 2590 aa8.69□□□□□ -1.02
IFT88-202ENST00000351808 DEFB116Q30KQ4 102 aa8.69□□□□□ -1.02
IFT88-202ENST00000351808 MAPK1IP1LQ8NDC0 245 aa8.69□□□□□ -1.02
IFT88-202ENST00000351808 IGSF10Q6WRI0 2623 aa8.69□□□□□ -1.02
IFT88-202ENST00000351808 LINC00208Q96KT6 92 aa8.68□□□□□ -1.02
IFT88-202ENST00000351808 FAM208BQ5VWN6 2430 aa8.68□□□□□ -1.02
IFT88-202ENST00000351808 IGLV5-48A0A075B6I7 105 aa8.67□□□□□ -1.02
IFT88-202ENST00000351808 Q6YL49 198 aa8.67□□□□□ -1.02
IFT88-202ENST00000351808 PRO0255Q9UI72 69 aa8.67□□□□□ -1.02
IFT88-202ENST00000351808 EPG5Q9HCE0 2579 aa8.67□□□□□ -1.02
IFT88-202ENST00000351808 GCN1Q92616 2671 aaKnown RBP8.66□□□□□ -1.02
IFT88-202ENST00000351808 GVQW2A0A096LPI5 108 aaPredicted RBP8.66□□□□□ -1.02
IFT88-202ENST00000351808 LRRK2Q5S007 2527 aa8.65□□□□□ -1.02
IFT88-202ENST00000351808 MP68P56378 58 aa8.65□□□□□ -1.03
IFT88-202ENST00000351808 TEX15Q9BXT5 2789 aa8.64□□□□□ -1.03
IFT88-202ENST00000351808 ANKRD17O75179 2603 aaKnown RBP8.64□□□□□ -1.03
IFT88-202ENST00000351808 C1orf137Q5JT78 98 aa8.64□□□□□ -1.03
IFT88-202ENST00000351808 DSCR9P59020 149 aa8.63□□□□□ -1.03
IFT88-202ENST00000351808 Q75L30 129 aa8.63□□□□□ -1.03
IFT88-202ENST00000351808 WFDC13Q8IUB5 93 aa8.63□□□□□ -1.03
IFT88-202ENST00000351808 C7orf65Q6ZTY9 151 aa8.63□□□□□ -1.03
IFT88-202ENST00000351808 Q8NBF4 154 aa8.62□□□□□ -1.03
IFT88-202ENST00000351808 C19orf73Q9NVV2 129 aa8.62□□□□□ -1.03
IFT88-202ENST00000351808 NAV2Q8IVL1 2488 aa8.61□□□□□ -1.03
IFT88-202ENST00000351808 NF1P21359 2839 aa8.61□□□□□ -1.03
IFT88-202ENST00000351808 KCNQ1DNQ9H478 68 aa8.61□□□□□ -1.03
IFT88-202ENST00000351808 C8orf87E5RJ46 101 aa8.6□□□□□ -1.03
IFT88-202ENST00000351808 A0A1B0GW54 56 aa8.6□□□□□ -1.03
IFT88-202ENST00000351808 CAMK2N2Q96S95 79 aa8.59□□□□□ -1.03
IFT88-202ENST00000351808 ABCA12Q86UK0 2595 aa8.59□□□□□ -1.03
IFT88-202ENST00000351808 Q9BRP9 147 aa8.59□□□□□ -1.03
IFT88-202ENST00000351808 CDC42SE1Q9NRR8 79 aa8.59□□□□□ -1.03
IFT88-202ENST00000351808 ZNF462Q96JM2 2506 aa8.59□□□□□ -1.03
IFT88-202ENST00000351808 DNAJC9-AS1A6NH13 148 aa8.59□□□□□ -1.04
IFT88-202ENST00000351808 WFDC10BQ8IUB3 73 aa8.59□□□□□ -1.04
IFT88-202ENST00000351808 LOC101927531A0A1B0GV80 90 aa8.58□□□□□ -1.04
IFT88-202ENST00000351808 MOBPQ13875 183 aa8.58□□□□□ -1.04
IFT88-202ENST00000351808 SPANXA2-OT1Q8N9U9 137 aa8.58□□□□□ -1.04
IFT88-202ENST00000351808 FSHBP01225 129 aa8.57□□□□□ -1.04
IFT88-202ENST00000351808 CMC4P56277 68 aaPredicted RBP8.57□□□□□ -1.04
IFT88-202ENST00000351808 SPRR4Q96PI1 79 aa8.57□□□□□ -1.04
IFT88-202ENST00000351808 TNP2Q05952 138 aa8.56□□□□□ -1.04
IFT88-202ENST00000351808 H3BS24 57 aa8.55□□□□□ -1.04
IFT88-202ENST00000351808 DEFB4AO15263 64 aa8.55□□□□□ -1.04
IFT88-202ENST00000351808 C7orf33Q8WU49 177 aa8.55□□□□□ -1.04
IFT88-202ENST00000351808 DOPEY1Q5JWR5 2465 aa8.55□□□□□ -1.04
IFT88-202ENST00000351808 H0Y9P7 68 aa8.55□□□□□ -1.04
IFT88-202ENST00000351808 A0A0G2JQZ4 141 aa8.55□□□□□ -1.04
IFT88-202ENST00000351808 A0A1W2PNN7 141 aa8.55□□□□□ -1.04
IFT88-202ENST00000351808 COA5Q86WW8 74 aa8.55□□□□□ -1.04
IFT88-202ENST00000351808 PRR34Q9NV39 138 aa8.54□□□□□ -1.04
IFT88-202ENST00000351808 F8P00451 2351 aa8.54□□□□□ -1.04
IFT88-202ENST00000351808 EGFEM1PQ0D2K5 195 aa8.54□□□□□ -1.04
IFT88-202ENST00000351808 USP24Q9UPU5 2620 aa8.53□□□□□ -1.04
IFT88-202ENST00000351808 IGKV2D-24A0A075B6R9 120 aa8.52□□□□□ -1.05
IFT88-202ENST00000351808 X6R8D5 127 aa8.51□□□□□ -1.05
IFT88-202ENST00000351808 RPL37AP61513 92 aaKnown RBP8.51□□□□□ -1.05
IFT88-202ENST00000351808 IGLV1-51P01701 117 aa8.5□□□□□ -1.05
IFT88-202ENST00000351808 SPAG11AQ6PDA7 123 aa8.5□□□□□ -1.05
IFT88-202ENST00000351808 NKAPP1Q8N9T2 125 aa8.5□□□□□ -1.05
IFT88-202ENST00000351808 RPL37AP8A6NKH3 93 aa8.49□□□□□ -1.05
IFT88-202ENST00000351808 LELP1Q5T871 98 aa8.49□□□□□ -1.05
IFT88-202ENST00000351808 SERTAD4-AS1Q5TG53 156 aa8.49□□□□□ -1.05
IFT88-202ENST00000351808 C9orf163Q8N9P6 203 aa8.49□□□□□ -1.05
IFT88-202ENST00000351808 DHRS4-AS1Q9P1J3 65 aa8.49□□□□□ -1.05
IFT88-202ENST00000351808 SPINK7P58062 85 aa8.48□□□□□ -1.05
IFT88-202ENST00000351808 Q6ZRX8 168 aa8.48□□□□□ -1.05
IFT88-202ENST00000351808 HTN3P15516 51 aa8.47□□□□□ -1.05
IFT88-202ENST00000351808 PRAC1Q96KF2 57 aa8.47□□□□□ -1.05
IFT88-202ENST00000351808 CCDC168Q8NDH2 2452 aa8.47□□□□□ -1.05
IFT88-202ENST00000351808 KRTAP29-1A8MX34 341 aaPredicted RBP8.47□□□□□ -1.05
IFT88-202ENST00000351808 H3BPC8 53 aa8.46□□□□□ -1.06
IFT88-202ENST00000351808 HIVEP2P31629 2446 aa8.45□□□□□ -1.06
IFT88-202ENST00000351808 LINC00313P59037 77 aa8.44□□□□□ -1.06
IFT88-202ENST00000351808 LINC00476Q8WZB0 136 aa8.44□□□□□ -1.06
IFT88-202ENST00000351808 LINC01558Q9Y6Z2 57 aa8.44□□□□□ -1.06
IFT88-202ENST00000351808 CASC2Q6XLA1 102 aa8.44□□□□□ -1.06
IFT88-202ENST00000351808 C15orf56Q8N910 161 aa8.44□□□□□ -1.06
IFT88-202ENST00000351808 OTOGQ6ZRI0 2925 aa8.43□□□□□ -1.06
IFT88-202ENST00000351808 A0A087WSZ3 146 aa8.43□□□□□ -1.06
IFT88-202ENST00000351808 IGLV7-46A0A075B6I9 117 aa8.42□□□□□ -1.06
IFT88-202ENST00000351808 KRTAP4-16G5E9R7 235 aaPredicted RBP8.42□□□□□ -1.06
IFT88-202ENST00000351808 PLAC8Q9NZF1 115 aa8.41□□□□□ -1.06
IFT88-202ENST00000351808 PCOTHQ58A44 107 aa8.41□□□□□ -1.06
IFT88-202ENST00000351808 KRTAP26-1Q6PEX3 210 aa8.4□□□□□ -1.06
IFT88-202ENST00000351808 IGFL1Q6UW32 110 aa8.4□□□□□ -1.06
IFT88-202ENST00000351808 DEFB135Q30KP9 77 aa8.4□□□□□ -1.07
IFT88-202ENST00000351808 ADM2Q7Z4H4 148 aa8.4□□□□□ -1.07
IFT88-202ENST00000351808 UNC79Q9P2D8 2635 aa8.39□□□□□ -1.07
IFT88-202ENST00000351808 MTORP42345 2549 aa8.39□□□□□ -1.07
IFT88-202ENST00000351808 CNBPP62633 177 aaKnown RBP8.39□□□□□ -1.07
IFT88-202ENST00000351808 FAM168BA1KXE4 195 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms