RNA–Protein interactions for RNA: ENST00000348495.10

SSBP4-202, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP4, Length 1,721 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-202ENST00000348495 CDK2AP2O75956 126 aa16.77■□□□□ 0.28
SSBP4-202ENST00000348495 REG3GQ6UW15 175 aa16.77■□□□□ 0.28
SSBP4-202ENST00000348495 KRTAP4-16G5E9R7 235 aaPredicted RBP16.76■□□□□ 0.27
SSBP4-202ENST00000348495 BIRC6Q9NR09 4857 aa16.75■□□□□ 0.27
SSBP4-202ENST00000348495 C6orf99Q4VX62 202 aa16.75■□□□□ 0.27
SSBP4-202ENST00000348495 PSORS1C2Q9UIG4 136 aa16.74■□□□□ 0.27
SSBP4-202ENST00000348495 DIRC1Q969H9 104 aa16.73■□□□□ 0.27
SSBP4-202ENST00000348495 TRIAP1O43715 76 aa16.73■□□□□ 0.27
SSBP4-202ENST00000348495 C9orf118A6NHY6 69 aa16.7■□□□□ 0.26
SSBP4-202ENST00000348495 NAA38Q9BRA0 125 aaKnown RBP16.7■□□□□ 0.26
SSBP4-202ENST00000348495 TRBV7-6A0A0J9YX20 115 aa16.69■□□□□ 0.26
SSBP4-202ENST00000348495 PSMB2P49721 201 aa16.68■□□□□ 0.26
SSBP4-202ENST00000348495 BCE1O60756 84 aa16.67■□□□□ 0.26
SSBP4-202ENST00000348495 H3BUT2 72 aa16.67■□□□□ 0.26
SSBP4-202ENST00000348495 B5MCH6 92 aa16.66■□□□□ 0.26
SSBP4-202ENST00000348495 SMR3BP02814 79 aaPredicted RBP16.66■□□□□ 0.26
SSBP4-202ENST00000348495 ELOF1P60002 83 aaKnown RBP16.66■□□□□ 0.26
SSBP4-202ENST00000348495 ETDCA0A1B0GVM5 59 aa16.65■□□□□ 0.26
SSBP4-202ENST00000348495 C1orf137Q5JT78 98 aa16.65■□□□□ 0.26
SSBP4-202ENST00000348495 LINC00528Q8N1L1 170 aa16.65■□□□□ 0.26
SSBP4-202ENST00000348495 COX7BP24311 80 aa16.63■□□□□ 0.25
SSBP4-202ENST00000348495 VAMP3Q15836 100 aa16.63■□□□□ 0.25
SSBP4-202ENST00000348495 Q6ZRX8 168 aa16.63■□□□□ 0.25
SSBP4-202ENST00000348495 FAM19A1Q7Z5A9 133 aa16.62■□□□□ 0.25
SSBP4-202ENST00000348495 COX6CP09669 75 aa16.62■□□□□ 0.25
SSBP4-202ENST00000348495 KRTAP13-1Q8IUC0 172 aa16.62■□□□□ 0.25
SSBP4-202ENST00000348495 H0Y9J4 135 aa16.6■□□□□ 0.25
SSBP4-202ENST00000348495 H0YGX0 51 aa16.6■□□□□ 0.25
SSBP4-202ENST00000348495 PRLHP81277 87 aa16.59■□□□□ 0.25
SSBP4-202ENST00000348495 HSPG2P98160 4391 aa16.58■□□□□ 0.24
SSBP4-202ENST00000348495 A0A1W2PPM0 123 aa16.58■□□□□ 0.24
SSBP4-202ENST00000348495 SCGB1C2P0DMR2 95 aa16.57■□□□□ 0.24
SSBP4-202ENST00000348495 IGLV7-43P04211 117 aa16.56■□□□□ 0.24
SSBP4-202ENST00000348495 FAM218AQ96MZ4 157 aa16.56■□□□□ 0.24
SSBP4-202ENST00000348495 Q9BRP9 147 aa16.56■□□□□ 0.24
SSBP4-202ENST00000348495 UBE2AP49459 152 aa16.56■□□□□ 0.24
SSBP4-202ENST00000348495 RPL37AP61513 92 aaKnown RBP16.56■□□□□ 0.24
SSBP4-202ENST00000348495 LINC00575Q6W349 94 aa16.56■□□□□ 0.24
SSBP4-202ENST00000348495 CLEC2BQ92478 149 aa16.55■□□□□ 0.24
SSBP4-202ENST00000348495 KIAA1109Q2LD37 5005 aa16.54■□□□□ 0.24
SSBP4-202ENST00000348495 RYR1P21817 5038 aa16.54■□□□□ 0.24
SSBP4-202ENST00000348495 FAT1Q14517 4588 aa16.53■□□□□ 0.24
SSBP4-202ENST00000348495 INAFM2P0DMQ5 153 aa16.53■□□□□ 0.24
SSBP4-202ENST00000348495 KRTAP10-4P60372 401 aaPredicted RBP16.53■□□□□ 0.24
SSBP4-202ENST00000348495 LYRM7Q5U5X0 104 aa16.53■□□□□ 0.24
SSBP4-202ENST00000348495 SMCR5Q8TEV8 140 aa16.53■□□□□ 0.24
SSBP4-202ENST00000348495 ZNF861PO60384 105 aa16.52■□□□□ 0.24
SSBP4-202ENST00000348495 FABP2P12104 132 aa16.52■□□□□ 0.24
SSBP4-202ENST00000348495 DHRS4-AS1Q9P1J3 65 aa16.5■□□□□ 0.23
SSBP4-202ENST00000348495 VPS13BQ7Z7G8 4022 aa16.5■□□□□ 0.23
SSBP4-202ENST00000348495 TCL1BO95988 128 aa16.48■□□□□ 0.23
SSBP4-202ENST00000348495 LST1O00453 97 aa16.48■□□□□ 0.23
SSBP4-202ENST00000348495 HIGD2AQ9BW72 106 aa16.48■□□□□ 0.23
SSBP4-202ENST00000348495 hADV29S1A0JD25 119 aa16.47■□□□□ 0.23
SSBP4-202ENST00000348495 ERC2-IT1O76042 136 aa16.47■□□□□ 0.23
SSBP4-202ENST00000348495 KRTAP17-1Q9BYP8 105 aa16.47■□□□□ 0.23
SSBP4-202ENST00000348495 A0A1B0GX51 115 aa16.46■□□□□ 0.23
SSBP4-202ENST00000348495 SLC25A20O43772 301 aa16.46■□□□□ 0.23
SSBP4-202ENST00000348495 TRBV20-1A0A075B6N2 111 aa16.45■□□□□ 0.22
SSBP4-202ENST00000348495 FAM229AH3BQW9 127 aa16.45■□□□□ 0.22
SSBP4-202ENST00000348495 ATXN8Q156A1 80 aa16.42■□□□□ 0.22
SSBP4-202ENST00000348495 SPCS1Q9Y6A9 102 aa16.42■□□□□ 0.22
SSBP4-202ENST00000348495 SRRM2Q9UQ35 2752 aaKnown RBP16.42■□□□□ 0.22
SSBP4-202ENST00000348495 TRACP01848 142 aa16.42■□□□□ 0.22
SSBP4-202ENST00000348495 PLA2G1BP04054 148 aaKnown RBP16.42■□□□□ 0.22
SSBP4-202ENST00000348495 Q5VSD8 79 aa16.42■□□□□ 0.22
SSBP4-202ENST00000348495 Q8N1X5 172 aa16.41■□□□□ 0.22
SSBP4-202ENST00000348495 SNCGO76070 127 aa16.39■□□□□ 0.21
SSBP4-202ENST00000348495 K7EP34 96 aa16.36■□□□□ 0.21
SSBP4-202ENST00000348495 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP16.36■□□□□ 0.21
SSBP4-202ENST00000348495 Q6ZQY7 126 aa16.36■□□□□ 0.21
SSBP4-202ENST00000348495 ST20-AS1Q8NBB2 130 aa16.36■□□□□ 0.21
SSBP4-202ENST00000348495 A0A1B0GV90 55 aa16.33■□□□□ 0.21
SSBP4-202ENST00000348495 SPINK6Q6UWN8 80 aa16.33■□□□□ 0.21
SSBP4-202ENST00000348495 H3BMG7 143 aa16.33■□□□□ 0.2
SSBP4-202ENST00000348495 DNAL4O96015 105 aa16.33■□□□□ 0.2
SSBP4-202ENST00000348495 IGLV5-48A0A075B6I7 105 aa16.31■□□□□ 0.2
SSBP4-202ENST00000348495 LINC01547P58512 204 aaPredicted RBP16.31■□□□□ 0.2
SSBP4-202ENST00000348495 GTF2H5Q6ZYL4 71 aa16.29■□□□□ 0.2
SSBP4-202ENST00000348495 SPRR4Q96PI1 79 aa16.29■□□□□ 0.2
SSBP4-202ENST00000348495 OCIAD2Q56VL3 154 aa16.27■□□□□ 0.19
SSBP4-202ENST00000348495 ZNF706Q9Y5V0 76 aaPredicted RBP16.27■□□□□ 0.19
SSBP4-202ENST00000348495 ORMDL1Q9P0S3 153 aa16.26■□□□□ 0.19
SSBP4-202ENST00000348495 C9JAW5 83 aa16.25■□□□□ 0.19
SSBP4-202ENST00000348495 Q8N377 158 aa16.25■□□□□ 0.19
SSBP4-202ENST00000348495 DEFB105AQ8NG35 78 aa16.25■□□□□ 0.19
SSBP4-202ENST00000348495 SPRR1BP22528 89 aa16.24■□□□□ 0.19
SSBP4-202ENST00000348495 LINC00483Q53H64 154 aa16.23■□□□□ 0.19
SSBP4-202ENST00000348495 GAGE2AQ6NT46 116 aa16.23■□□□□ 0.19
SSBP4-202ENST00000348495 TEX49A0A1B0GTD5 131 aa16.22■□□□□ 0.19
SSBP4-202ENST00000348495 HERC2O95714 4834 aa16.22■□□□□ 0.19
SSBP4-202ENST00000348495 PPDPFLQ8WWR9 84 aa16.21■□□□□ 0.19
SSBP4-202ENST00000348495 GHRHP01286 108 aa16.19■□□□□ 0.18
SSBP4-202ENST00000348495 KRTAP1-4P0C5Y4 121 aa16.19■□□□□ 0.18
SSBP4-202ENST00000348495 BAALC-AS2P0C853 105 aa16.19■□□□□ 0.18
SSBP4-202ENST00000348495 MTURNQ8N3F0 131 aa16.19■□□□□ 0.18
SSBP4-202ENST00000348495 PRO0461Q9UI25 63 aa16.19■□□□□ 0.18
SSBP4-202ENST00000348495 H3BQ85 93 aa16.18■□□□□ 0.18
SSBP4-202ENST00000348495 TMEM256-PLSCR3K7ERE1 68 aa16.16■□□□□ 0.18
SSBP4-202ENST00000348495 SMIM29Q86T20 159 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 119 ms