RNA–Protein interactions for RNA: ENST00000348165.9

UBE3C-201, Transcript of ubiquitin protein ligase E3C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3C, Length 5,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3C-201ENST00000348165 LAMA3Q16787 3333 aa12.39□□□□□ -0.43
UBE3C-201ENST00000348165 SETXQ7Z333 2677 aaKnown RBP12.38□□□□□ -0.43
UBE3C-201ENST00000348165 H3BPC8 53 aa12.38□□□□□ -0.43
UBE3C-201ENST00000348165 HTTP42858 3142 aa12.38□□□□□ -0.43
UBE3C-201ENST00000348165 A0A1B0GW54 56 aa12.38□□□□□ -0.43
UBE3C-201ENST00000348165 ERC2-IT1O76042 136 aa12.37□□□□□ -0.43
UBE3C-201ENST00000348165 RPL37AP61513 92 aaKnown RBP12.37□□□□□ -0.43
UBE3C-201ENST00000348165 KRTAP1-3Q8IUG1 177 aa12.37□□□□□ -0.43
UBE3C-201ENST00000348165 KLKP1Q107X0 134 aa12.36□□□□□ -0.43
UBE3C-201ENST00000348165 PRR34Q9NV39 138 aa12.35□□□□□ -0.43
UBE3C-201ENST00000348165 TP53AIP1Q9HCN2 124 aa12.35□□□□□ -0.43
UBE3C-201ENST00000348165 CYP4F30PQ9H0H9 118 aa12.34□□□□□ -0.43
UBE3C-201ENST00000348165 ATP11AUNQ6ZP68 121 aa12.34□□□□□ -0.43
UBE3C-201ENST00000348165 A0A0C4DFX4 3053 aa12.33□□□□□ -0.43
UBE3C-201ENST00000348165 CFAP54Q96N23 3096 aa12.33□□□□□ -0.44
UBE3C-201ENST00000348165 C7orf65Q6ZTY9 151 aa12.33□□□□□ -0.44
UBE3C-201ENST00000348165 STAB1Q9NY15 2570 aa12.32□□□□□ -0.44
UBE3C-201ENST00000348165 MGAQ8IWI9 3026 aa12.32□□□□□ -0.44
UBE3C-201ENST00000348165 ACYP2P14621 99 aa12.32□□□□□ -0.44
UBE3C-201ENST00000348165 IGLV1-50A0A075B6I6 118 aa12.31□□□□□ -0.44
UBE3C-201ENST00000348165 WIPF1O43516 503 aa12.31□□□□□ -0.44
UBE3C-201ENST00000348165 C15orf56Q8N910 161 aa12.31□□□□□ -0.44
UBE3C-201ENST00000348165 MKI67P46013 3256 aaKnown RBP12.31□□□□□ -0.44
UBE3C-201ENST00000348165 LINC00313P59037 77 aa12.31□□□□□ -0.44
UBE3C-201ENST00000348165 KRTAP1-1Q07627 177 aa12.3□□□□□ -0.44
UBE3C-201ENST00000348165 H7BZZ5 65 aa12.29□□□□□ -0.44
UBE3C-201ENST00000348165 PLA2G1BP04054 148 aaKnown RBP12.29□□□□□ -0.44
UBE3C-201ENST00000348165 LINC00612Q8N6U2 182 aa12.29□□□□□ -0.44
UBE3C-201ENST00000348165 KCNQ1DNQ9H478 68 aa12.28□□□□□ -0.44
UBE3C-201ENST00000348165 TRAV22A0A0B4J277 110 aa12.26□□□□□ -0.45
UBE3C-201ENST00000348165 LINC00528Q8N1L1 170 aa12.26□□□□□ -0.45
UBE3C-201ENST00000348165 TRBV7-4A0A0J9YYF1 115 aa12.26□□□□□ -0.45
UBE3C-201ENST00000348165 KTN1-AS1Q86SY8 53 aa12.25□□□□□ -0.45
UBE3C-201ENST00000348165 CHD6Q8TD26 2715 aa12.25□□□□□ -0.45
UBE3C-201ENST00000348165 BRCA2P51587 3418 aa12.24□□□□□ -0.45
UBE3C-201ENST00000348165 TEX15Q9BXT5 2789 aa12.23□□□□□ -0.45
UBE3C-201ENST00000348165 ZNF292O60281 2723 aa12.23□□□□□ -0.45
UBE3C-201ENST00000348165 C9orf129Q5T035 196 aaKnown RBP12.22□□□□□ -0.45
UBE3C-201ENST00000348165 Q96NJ1 140 aa12.22□□□□□ -0.45
UBE3C-201ENST00000348165 WDFY4Q6ZS81 3184 aa12.21□□□□□ -0.46
UBE3C-201ENST00000348165 A0A087WTM6 91 aa12.2□□□□□ -0.46
UBE3C-201ENST00000348165 K7EQZ3 153 aa12.19□□□□□ -0.46
UBE3C-201ENST00000348165 COA5Q86WW8 74 aa12.19□□□□□ -0.46
UBE3C-201ENST00000348165 LOC101927531A0A1B0GV80 90 aa12.19□□□□□ -0.46
UBE3C-201ENST00000348165 LAMA2P24043 3122 aaKnown RBP12.18□□□□□ -0.46
UBE3C-201ENST00000348165 C9orf163Q8N9P6 203 aa12.18□□□□□ -0.46
UBE3C-201ENST00000348165 CASC10Q5T4H9 136 aa12.18□□□□□ -0.46
UBE3C-201ENST00000348165 LCA10Q71F78 164 aa12.17□□□□□ -0.46
UBE3C-201ENST00000348165 A0A0G2JQZ4 141 aa12.17□□□□□ -0.46
UBE3C-201ENST00000348165 A0A1W2PNN7 141 aa12.17□□□□□ -0.46
UBE3C-201ENST00000348165 A8MWP4 228 aa12.16□□□□□ -0.46
UBE3C-201ENST00000348165 IGFL1Q6UW32 110 aa12.16□□□□□ -0.46
UBE3C-201ENST00000348165 PRUNE2Q8WUY3 3088 aa12.16□□□□□ -0.46
UBE3C-201ENST00000348165 SMR3BP02814 79 aaPredicted RBP12.15□□□□□ -0.46
UBE3C-201ENST00000348165 MAP1AP78559 2803 aaPredicted RBP12.14□□□□□ -0.47
UBE3C-201ENST00000348165 SPINT4Q6UDR6 99 aa12.14□□□□□ -0.47
UBE3C-201ENST00000348165 ZNF861PO60384 105 aa12.14□□□□□ -0.47
UBE3C-201ENST00000348165 Q8N377 158 aa12.14□□□□□ -0.47
UBE3C-201ENST00000348165 COL6A5A8TX70 2615 aa12.13□□□□□ -0.47
UBE3C-201ENST00000348165 ANAPC11Q9NYG5 84 aa12.13□□□□□ -0.47
UBE3C-201ENST00000348165 J3QL48 77 aa12.11□□□□□ -0.47
UBE3C-201ENST00000348165 MRPL34Q9BQ48 92 aaKnown RBP12.1□□□□□ -0.47
UBE3C-201ENST00000348165 APLNQ9ULZ1 77 aa12.1□□□□□ -0.47
UBE3C-201ENST00000348165 TRANK1O15050 2925 aa12.1□□□□□ -0.47
UBE3C-201ENST00000348165 IGLV8-61A0A075B6I0 122 aa12.1□□□□□ -0.47
UBE3C-201ENST00000348165 PRR15Q8IV56 129 aa12.09□□□□□ -0.47
UBE3C-201ENST00000348165 TLX1NBP0CAT3 122 aa12.08□□□□□ -0.48
UBE3C-201ENST00000348165 DSPP15924 2871 aaKnown RBP12.07□□□□□ -0.48
UBE3C-201ENST00000348165 UQCR11O14957 56 aa12.06□□□□□ -0.48
UBE3C-201ENST00000348165 TRIOO75962 3097 aa12.06□□□□□ -0.48
UBE3C-201ENST00000348165 DSCR10P59022 87 aa12.05□□□□□ -0.48
UBE3C-201ENST00000348165 SSBP3-AS1Q7Z2R9 100 aa12.05□□□□□ -0.48
UBE3C-201ENST00000348165 LINC01600Q96MT4 127 aa12.04□□□□□ -0.48
UBE3C-201ENST00000348165 LINC00304Q8N9R0 145 aa12.03□□□□□ -0.48
UBE3C-201ENST00000348165 NOTCH1P46531 2555 aa12.03□□□□□ -0.48
UBE3C-201ENST00000348165 PSORS1C2Q9UIG4 136 aa12.03□□□□□ -0.48
UBE3C-201ENST00000348165 PLA2G2DQ9UNK4 145 aa12.02□□□□□ -0.49
UBE3C-201ENST00000348165 ZNF575Q86XF7 245 aa12.01□□□□□ -0.49
UBE3C-201ENST00000348165 C8orf17Q9NRJ1 99 aa12□□□□□ -0.49
UBE3C-201ENST00000348165 OBSCN-AS1Q96MR7 158 aa11.99□□□□□ -0.49
UBE3C-201ENST00000348165 IGLV7-43P04211 117 aa11.98□□□□□ -0.49
UBE3C-201ENST00000348165 CNBPP62633 177 aaKnown RBP11.98□□□□□ -0.49
UBE3C-201ENST00000348165 NBEAL1Q6ZS30 2694 aa11.97□□□□□ -0.49
UBE3C-201ENST00000348165 XIRP2A4UGR9 3374 aa11.97□□□□□ -0.49
UBE3C-201ENST00000348165 C9orf92A6NGG3 77 aa11.97□□□□□ -0.49
UBE3C-201ENST00000348165 MIR22HGQ0VDD5 57 aa11.96□□□□□ -0.49
UBE3C-201ENST00000348165 UNC80Q8N2C7 3258 aa11.96□□□□□ -0.49
UBE3C-201ENST00000348165 A0A1B0GVX0 72 aa11.95□□□□□ -0.5
UBE3C-201ENST00000348165 UNC79Q9P2D8 2635 aa11.95□□□□□ -0.5
UBE3C-201ENST00000348165 CDC42SE1Q9NRR8 79 aa11.93□□□□□ -0.5
UBE3C-201ENST00000348165 SPRR4Q96PI1 79 aa11.92□□□□□ -0.5
UBE3C-201ENST00000348165 Q5XG85 94 aa11.92□□□□□ -0.5
UBE3C-201ENST00000348165 A0A1W2PNM2 257 aa11.91□□□□□ -0.5
UBE3C-201ENST00000348165 Q1T7F1 81 aa11.89□□□□□ -0.51
UBE3C-201ENST00000348165 TNP2Q05952 138 aa11.89□□□□□ -0.51
UBE3C-201ENST00000348165 GCN1Q92616 2671 aaKnown RBP11.89□□□□□ -0.51
UBE3C-201ENST00000348165 RBM12B-AS1Q9P1G2 102 aa11.88□□□□□ -0.51
UBE3C-201ENST00000348165 COX6B2Q6YFQ2 88 aa11.87□□□□□ -0.51
UBE3C-201ENST00000348165 UBR5O95071 2799 aaPredicted RBP11.87□□□□□ -0.51
UBE3C-201ENST00000348165 CR1P17927 2039 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms