RNA–Protein interactions for RNA: ENST00000345851.7

TRIM3-201, Transcript of tripartite motif containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM3, Length 2,879 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-201ENST00000345851 C6orf48Q9UBA6 75 aa14.26□□□□□ -0.13
TRIM3-201ENST00000345851 KLK12Q9UKR0 248 aa14.26□□□□□ -0.13
TRIM3-201ENST00000345851 C3orf84H3BNL1 204 aa14.26□□□□□ -0.13
TRIM3-201ENST00000345851 HIGD2AQ9BW72 106 aa14.26□□□□□ -0.13
TRIM3-201ENST00000345851 FUSP35637 526 aaKnown RBP eCLIP14.25□□□□□ -0.13
TRIM3-201ENST00000345851 ELOF1P60002 83 aaKnown RBP14.25□□□□□ -0.13
TRIM3-201ENST00000345851 NOTCH1P46531 2555 aa14.25□□□□□ -0.13
TRIM3-201ENST00000345851 OXLD1Q5BKU9 147 aa14.24□□□□□ -0.13
TRIM3-201ENST00000345851 OCR1Q9BZK8 76 aa14.24□□□□□ -0.13
TRIM3-201ENST00000345851 KRTAP24-1Q3LI83 254 aa14.24□□□□□ -0.13
TRIM3-201ENST00000345851 HTN3P15516 51 aa14.21□□□□□ -0.13
TRIM3-201ENST00000345851 ERC2-IT1O76042 136 aa14.21□□□□□ -0.13
TRIM3-201ENST00000345851 ESRGQ1W209 222 aa14.2□□□□□ -0.14
TRIM3-201ENST00000345851 C1orf195Q5TG92 126 aa14.2□□□□□ -0.14
TRIM3-201ENST00000345851 CELA1Q9UNI1 258 aa14.2□□□□□ -0.14
TRIM3-201ENST00000345851 HIGD2BQ4VC39 106 aa14.19□□□□□ -0.14
TRIM3-201ENST00000345851 LRCOL1A6NCL2 159 aa14.18□□□□□ -0.14
TRIM3-201ENST00000345851 Q6ZTC4 211 aa14.17□□□□□ -0.14
TRIM3-201ENST00000345851 CMYA5Q8N3K9 4069 aa14.17□□□□□ -0.14
TRIM3-201ENST00000345851 DEFB105AQ8NG35 78 aa14.16□□□□□ -0.14
TRIM3-201ENST00000345851 FAM30AQ9NZY2 134 aa14.16□□□□□ -0.14
TRIM3-201ENST00000345851 VPREB1P12018 145 aa14.15□□□□□ -0.14
TRIM3-201ENST00000345851 LINC00528Q8N1L1 170 aa14.13□□□□□ -0.15
TRIM3-201ENST00000345851 GVQW2A0A096LPI5 108 aaPredicted RBP14.13□□□□□ -0.15
TRIM3-201ENST00000345851 LYRM9A8MSI8 78 aa14.12□□□□□ -0.15
TRIM3-201ENST00000345851 SMIM29Q86T20 159 aa14.12□□□□□ -0.15
TRIM3-201ENST00000345851 CAMK2N2Q96S95 79 aa14.12□□□□□ -0.15
TRIM3-201ENST00000345851 TENM3Q9P273 2699 aa14.1□□□□□ -0.15
TRIM3-201ENST00000345851 KRTAP10-11P60412 298 aa14.1□□□□□ -0.15
TRIM3-201ENST00000345851 PRR34Q9NV39 138 aa14.09□□□□□ -0.15
TRIM3-201ENST00000345851 F8WDY8 70 aa14.09□□□□□ -0.15
TRIM3-201ENST00000345851 M0R378 163 aa14.09□□□□□ -0.15
TRIM3-201ENST00000345851 V9GYY9 64 aa14.09□□□□□ -0.15
TRIM3-201ENST00000345851 LELP1Q5T871 98 aa14.08□□□□□ -0.15
TRIM3-201ENST00000345851 APOC4P55056 127 aa14.08□□□□□ -0.16
TRIM3-201ENST00000345851 RETNQ9HD89 108 aa14.08□□□□□ -0.16
TRIM3-201ENST00000345851 NBEAL1Q6ZS30 2694 aa14.06□□□□□ -0.16
TRIM3-201ENST00000345851 Q6ZRU5 148 aa14.05□□□□□ -0.16
TRIM3-201ENST00000345851 Q8NAQ8 132 aa14.03□□□□□ -0.16
TRIM3-201ENST00000345851 PRB2P02812 416 aaPredicted RBP14.02□□□□□ -0.16
TRIM3-201ENST00000345851 hDV103S1A0JD37 113 aa14.01□□□□□ -0.17
TRIM3-201ENST00000345851 KPRPQ5T749 579 aaPredicted RBP14.01□□□□□ -0.17
TRIM3-201ENST00000345851 Q8N377 158 aa14.01□□□□□ -0.17
TRIM3-201ENST00000345851 PRR4Q16378 134 aa14□□□□□ -0.17
TRIM3-201ENST00000345851 MGAM2Q2M2H8 2515 aa13.99□□□□□ -0.17
TRIM3-201ENST00000345851 SEC61GP60059 68 aa13.99□□□□□ -0.17
TRIM3-201ENST00000345851 C1orf64Q8NEQ6 169 aa13.99□□□□□ -0.17
TRIM3-201ENST00000345851 EGFEM1PQ0D2K5 195 aa13.98□□□□□ -0.17
TRIM3-201ENST00000345851 Q6ZRP5 223 aa13.97□□□□□ -0.17
TRIM3-201ENST00000345851 PSPHP1O15172 72 aa13.96□□□□□ -0.17
TRIM3-201ENST00000345851 A0A1W2PNM2 257 aa13.95□□□□□ -0.18
TRIM3-201ENST00000345851 WFDC10BQ8IUB3 73 aa13.95□□□□□ -0.18
TRIM3-201ENST00000345851 IGLV5-48A0A075B6I7 105 aa13.92□□□□□ -0.18
TRIM3-201ENST00000345851 SPART-AS1P0CW21 52 aa13.92□□□□□ -0.18
TRIM3-201ENST00000345851 C15orf56Q8N910 161 aa13.92□□□□□ -0.18
TRIM3-201ENST00000345851 NKAPP1Q8N9T2 125 aa13.91□□□□□ -0.18
TRIM3-201ENST00000345851 C1orf137Q5JT78 98 aa13.89□□□□□ -0.19
TRIM3-201ENST00000345851 K7EQZ3 153 aa13.89□□□□□ -0.19
TRIM3-201ENST00000345851 SERTAD4-AS1Q5TG53 156 aa13.89□□□□□ -0.19
TRIM3-201ENST00000345851 RPL37AP8A6NKH3 93 aa13.88□□□□□ -0.19
TRIM3-201ENST00000345851 LCE6AA0A183 80 aa13.88□□□□□ -0.19
TRIM3-201ENST00000345851 C7orf33Q8WU49 177 aa13.88□□□□□ -0.19
TRIM3-201ENST00000345851 ST20-AS1Q8NBB2 130 aa13.87□□□□□ -0.19
TRIM3-201ENST00000345851 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.87□□□□□ -0.19
TRIM3-201ENST00000345851 ETDCA0A1B0GVM5 59 aa13.87□□□□□ -0.19
TRIM3-201ENST00000345851 DSCR10P59022 87 aa13.86□□□□□ -0.19
TRIM3-201ENST00000345851 Q1T7F1 81 aa13.86□□□□□ -0.19
TRIM3-201ENST00000345851 KRTAP26-1Q6PEX3 210 aa13.86□□□□□ -0.19
TRIM3-201ENST00000345851 PRR15Q8IV56 129 aa13.85□□□□□ -0.19
TRIM3-201ENST00000345851 ZCCHC13Q8WW36 166 aaKnown RBP13.85□□□□□ -0.19
TRIM3-201ENST00000345851 KCNQ1DNQ9H478 68 aa13.85□□□□□ -0.19
TRIM3-201ENST00000345851 DNAH3Q8TD57 4116 aa13.85□□□□□ -0.19
TRIM3-201ENST00000345851 TRAV22A0A0B4J277 110 aa13.83□□□□□ -0.2
TRIM3-201ENST00000345851 Q8NBF4 154 aa13.82□□□□□ -0.2
TRIM3-201ENST00000345851 Q9BRP9 147 aa13.82□□□□□ -0.2
TRIM3-201ENST00000345851 IGKV2D-24A0A075B6R9 120 aa13.81□□□□□ -0.2
TRIM3-201ENST00000345851 PMAIP1Q13794 54 aa13.81□□□□□ -0.2
TRIM3-201ENST00000345851 SYCNQ0VAF6 134 aa13.8□□□□□ -0.2
TRIM3-201ENST00000345851 A0A0G2JQZ4 141 aa13.79□□□□□ -0.2
TRIM3-201ENST00000345851 A0A1W2PNN7 141 aa13.79□□□□□ -0.2
TRIM3-201ENST00000345851 DEFB116Q30KQ4 102 aa13.79□□□□□ -0.2
TRIM3-201ENST00000345851 Q6ZRX8 168 aa13.79□□□□□ -0.2
TRIM3-201ENST00000345851 TNP2Q05952 138 aa13.77□□□□□ -0.2
TRIM3-201ENST00000345851 FAM168BA1KXE4 195 aa13.77□□□□□ -0.21
TRIM3-201ENST00000345851 A8MUN3 132 aa13.77□□□□□ -0.21
TRIM3-201ENST00000345851 DHRS4-AS1Q9P1J3 65 aa13.77□□□□□ -0.21
TRIM3-201ENST00000345851 A8MU10 97 aa13.75□□□□□ -0.21
TRIM3-201ENST00000345851 HCG22E2RYF7 251 aa13.75□□□□□ -0.21
TRIM3-201ENST00000345851 WFDC13Q8IUB5 93 aa13.75□□□□□ -0.21
TRIM3-201ENST00000345851 PSCAO43653 123 aa13.73□□□□□ -0.21
TRIM3-201ENST00000345851 A0A1B0GW54 56 aa13.73□□□□□ -0.21
TRIM3-201ENST00000345851 SPRR4Q96PI1 79 aa13.73□□□□□ -0.21
TRIM3-201ENST00000345851 HUWE1Q7Z6Z7 4374 aaKnown RBP13.72□□□□□ -0.21
TRIM3-201ENST00000345851 CYP4F30PQ9H0H9 118 aa13.71□□□□□ -0.21
TRIM3-201ENST00000345851 MDFIQ99750 246 aa13.7□□□□□ -0.22
TRIM3-201ENST00000345851 KRTAP4-16G5E9R7 235 aaPredicted RBP13.69□□□□□ -0.22
TRIM3-201ENST00000345851 UBE2BP63146 152 aa13.69□□□□□ -0.22
TRIM3-201ENST00000345851 COL7A1Q02388 2944 aa13.67□□□□□ -0.22
TRIM3-201ENST00000345851 K7EIL1 84 aa13.67□□□□□ -0.22
TRIM3-201ENST00000345851 C11orf45Q8TAV5 145 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms