RNA–Protein interactions for RNA: ENST00000344626.8

SMARCA4-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 1 (best) BASIC

Gene SMARCA4, Length 5,392 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-201ENST00000344626 KIAA0087Q14695 138 aa10.95□□□□□ -0.66
SMARCA4-201ENST00000344626 MOBPQ13875 183 aa10.95□□□□□ -0.66
SMARCA4-201ENST00000344626 Q6ZRX8 168 aa10.95□□□□□ -0.66
SMARCA4-201ENST00000344626 UQCRQO14949 82 aa10.95□□□□□ -0.66
SMARCA4-201ENST00000344626 EPM2AB3EWF7 344 aa10.94□□□□□ -0.66
SMARCA4-201ENST00000344626 SPACA4Q8TDM5 124 aa10.93□□□□□ -0.66
SMARCA4-201ENST00000344626 Q8N9L7 120 aa10.93□□□□□ -0.66
SMARCA4-201ENST00000344626 DMBT1Q9UGM3 2413 aaPredicted RBP10.92□□□□□ -0.66
SMARCA4-201ENST00000344626 TYMSOSQ8TAI1 123 aa10.92□□□□□ -0.66
SMARCA4-201ENST00000344626 Q8NBF4 154 aa10.91□□□□□ -0.66
SMARCA4-201ENST00000344626 NDUFC1O43677 76 aa10.91□□□□□ -0.66
SMARCA4-201ENST00000344626 SOSTDC1Q6X4U4 206 aa10.9□□□□□ -0.66
SMARCA4-201ENST00000344626 FAM30AQ9NZY2 134 aa10.89□□□□□ -0.67
SMARCA4-201ENST00000344626 C3orf22Q8N5N4 141 aa10.89□□□□□ -0.67
SMARCA4-201ENST00000344626 SERP2Q8N6R1 65 aa10.89□□□□□ -0.67
SMARCA4-201ENST00000344626 Q6ZVQ6 151 aa10.89□□□□□ -0.67
SMARCA4-201ENST00000344626 SPTSSBQ8NFR3 76 aa10.88□□□□□ -0.67
SMARCA4-201ENST00000344626 A0A1B0GW54 56 aa10.87□□□□□ -0.67
SMARCA4-201ENST00000344626 VPREB1P12018 145 aa10.87□□□□□ -0.67
SMARCA4-201ENST00000344626 LINC01547P58512 204 aaPredicted RBP10.87□□□□□ -0.67
SMARCA4-201ENST00000344626 NIPBLQ6KC79 2804 aaeCLIP10.87□□□□□ -0.674e-6■□□□□ 9.9
SMARCA4-201ENST00000344626 PRR4Q16378 134 aa10.86□□□□□ -0.67
SMARCA4-201ENST00000344626 TNP2Q05952 138 aa10.86□□□□□ -0.67
SMARCA4-201ENST00000344626 C15orf56Q8N910 161 aa10.85□□□□□ -0.67
SMARCA4-201ENST00000344626 C9orf163Q8N9P6 203 aa10.84□□□□□ -0.67
SMARCA4-201ENST00000344626 CFAP47Q6ZTR5 3102 aa10.84□□□□□ -0.67
SMARCA4-201ENST00000344626 ATP5EP56381 51 aaPredicted RBP10.83□□□□□ -0.68
SMARCA4-201ENST00000344626 DEFB116Q30KQ4 102 aa10.83□□□□□ -0.68
SMARCA4-201ENST00000344626 FAM236DA0A1B0GTK5 79 aa10.83□□□□□ -0.68
SMARCA4-201ENST00000344626 FAM236CP0DP71 79 aa10.83□□□□□ -0.68
SMARCA4-201ENST00000344626 ZNF575Q86XF7 245 aa10.82□□□□□ -0.68
SMARCA4-201ENST00000344626 FAM168BA1KXE4 195 aa10.81□□□□□ -0.68
SMARCA4-201ENST00000344626 PRR15LQ9BU68 103 aa10.81□□□□□ -0.68
SMARCA4-201ENST00000344626 IGLV1-50A0A075B6I6 118 aa10.81□□□□□ -0.68
SMARCA4-201ENST00000344626 IGLV6-57P01721 117 aa10.81□□□□□ -0.68
SMARCA4-201ENST00000344626 DNAH14Q0VDD8 3507 aa10.81□□□□□ -0.68
SMARCA4-201ENST00000344626 TLX1NBP0CAT3 122 aa10.8□□□□□ -0.68
SMARCA4-201ENST00000344626 HCG22E2RYF7 251 aa10.8□□□□□ -0.68
SMARCA4-201ENST00000344626 SERTAD4-AS1Q5TG53 156 aa10.8□□□□□ -0.68
SMARCA4-201ENST00000344626 LINC00208Q96KT6 92 aa10.79□□□□□ -0.68
SMARCA4-201ENST00000344626 TRAV7A0A075B6U4 112 aa10.78□□□□□ -0.68
SMARCA4-201ENST00000344626 SERP1Q9Y6X1 66 aa10.78□□□□□ -0.68
SMARCA4-201ENST00000344626 Q6Q795 121 aa10.78□□□□□ -0.68
SMARCA4-201ENST00000344626 RETNLBQ9BQ08 111 aa10.78□□□□□ -0.68
SMARCA4-201ENST00000344626 KCNQ1DNQ9H478 68 aa10.78□□□□□ -0.68
SMARCA4-201ENST00000344626 SNURFQ9Y675 71 aa10.78□□□□□ -0.68
SMARCA4-201ENST00000344626 ZANQ9Y493 2812 aa10.78□□□□□ -0.68
SMARCA4-201ENST00000344626 SPTBN5Q9NRC6 3674 aaKnown RBP10.77□□□□□ -0.68
SMARCA4-201ENST00000344626 CXCL6P80162 114 aa10.77□□□□□ -0.69
SMARCA4-201ENST00000344626 CNBPP62633 177 aaKnown RBP10.76□□□□□ -0.69
SMARCA4-201ENST00000344626 ST20-AS1Q8NBB2 130 aa10.76□□□□□ -0.69
SMARCA4-201ENST00000344626 LRBAP50851 2863 aa10.76□□□□□ -0.69
SMARCA4-201ENST00000344626 LITAFQ99732 161 aa10.76□□□□□ -0.69
SMARCA4-201ENST00000344626 K7ERS5 55 aa10.76□□□□□ -0.69
SMARCA4-201ENST00000344626 PLA2G2DQ9UNK4 145 aa10.76□□□□□ -0.69
SMARCA4-201ENST00000344626 COX7CP15954 63 aa10.75□□□□□ -0.69
SMARCA4-201ENST00000344626 LINC00846Q9NV44 126 aa10.75□□□□□ -0.69
SMARCA4-201ENST00000344626 FAM218AQ96MZ4 157 aa10.74□□□□□ -0.69
SMARCA4-201ENST00000344626 CELSR2Q9HCU4 2923 aa10.73□□□□□ -0.69
SMARCA4-201ENST00000344626 ZNF861PO60384 105 aa10.73□□□□□ -0.69
SMARCA4-201ENST00000344626 LINC00528Q8N1L1 170 aa10.73□□□□□ -0.69
SMARCA4-201ENST00000344626 V9GYY9 64 aa10.72□□□□□ -0.69
SMARCA4-201ENST00000344626 H0Y9P7 68 aa10.71□□□□□ -0.7
SMARCA4-201ENST00000344626 A0A087WVE0 104 aa10.7□□□□□ -0.7
SMARCA4-201ENST00000344626 LOC110117498A0A087WWA1 95 aa10.7□□□□□ -0.7
SMARCA4-201ENST00000344626 SPAG11AQ6PDA7 123 aa10.7□□□□□ -0.7
SMARCA4-201ENST00000344626 C9orf129Q5T035 196 aaKnown RBP10.69□□□□□ -0.7
SMARCA4-201ENST00000344626 TP53AIP1Q9HCN2 124 aa10.69□□□□□ -0.7
SMARCA4-201ENST00000344626 USP34Q70CQ2 3546 aa10.68□□□□□ -0.7
SMARCA4-201ENST00000344626 CDIP1Q9H305 208 aa10.68□□□□□ -0.7
SMARCA4-201ENST00000344626 SPEGQ15772 3267 aa10.67□□□□□ -0.7
SMARCA4-201ENST00000344626 LCE6AA0A183 80 aa10.67□□□□□ -0.7
SMARCA4-201ENST00000344626 LINC00313P59037 77 aa10.67□□□□□ -0.7
SMARCA4-201ENST00000344626 SSBP3-AS1Q7Z2R9 100 aa10.67□□□□□ -0.7
SMARCA4-201ENST00000344626 hDV103S1A0JD37 113 aa10.66□□□□□ -0.7
SMARCA4-201ENST00000344626 Q6ZQT0 140 aa10.66□□□□□ -0.7
SMARCA4-201ENST00000344626 TRBV7-4A0A0J9YYF1 115 aa10.65□□□□□ -0.7
SMARCA4-201ENST00000344626 LINC00304Q8N9R0 145 aa10.64□□□□□ -0.71
SMARCA4-201ENST00000344626 IGLV7-43P04211 117 aa10.64□□□□□ -0.71
SMARCA4-201ENST00000344626 KRTAP21-3Q3LHN1 58 aa10.64□□□□□ -0.71
SMARCA4-201ENST00000344626 IGKV2D-30A0A075B6S6 120 aa10.63□□□□□ -0.71
SMARCA4-201ENST00000344626 IGKV2-30P06310 120 aa10.63□□□□□ -0.71
SMARCA4-201ENST00000344626 PCOTHQ58A44 107 aa10.63□□□□□ -0.71
SMARCA4-201ENST00000344626 DCHS2Q6V1P9 2916 aa10.61□□□□□ -0.71
SMARCA4-201ENST00000344626 MPLKIPQ8TAP9 179 aa10.61□□□□□ -0.71
SMARCA4-201ENST00000344626 C8orf87E5RJ46 101 aa10.6□□□□□ -0.71
SMARCA4-201ENST00000344626 ASH1LQ9NR48 2969 aaKnown RBP10.6□□□□□ -0.71
SMARCA4-201ENST00000344626 A0A1W2PNN7 141 aa10.6□□□□□ -0.71
SMARCA4-201ENST00000344626 ATP11AUNQ6ZP68 121 aa10.6□□□□□ -0.71
SMARCA4-201ENST00000344626 PSORS1C2Q9UIG4 136 aa10.6□□□□□ -0.71
SMARCA4-201ENST00000344626 LOC400499M0QZD8 3231 aa10.58□□□□□ -0.72
SMARCA4-201ENST00000344626 C1orf64Q8NEQ6 169 aa10.58□□□□□ -0.72
SMARCA4-201ENST00000344626 ANAPC11Q9NYG5 84 aa10.57□□□□□ -0.72
SMARCA4-201ENST00000344626 Q96NJ1 140 aa10.57□□□□□ -0.72
SMARCA4-201ENST00000344626 SMIM29Q86T20 159 aa10.57□□□□□ -0.72
SMARCA4-201ENST00000344626 TRBV7-7A0A0K0K1E9 115 aa10.56□□□□□ -0.72
SMARCA4-201ENST00000344626 TMEM254Q8TBM7 123 aa10.54□□□□□ -0.72
SMARCA4-201ENST00000344626 IGLV5-37A0A075B6J1 123 aa10.54□□□□□ -0.72
SMARCA4-201ENST00000344626 SMCPP49901 116 aaPredicted RBP10.53□□□□□ -0.72
SMARCA4-201ENST00000344626 SPINK1P00995 79 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 142.2 ms