RNA–Protein interactions for RNA: ENST00000341372.7

TPM3-207, Transcript of tropomyosin 3, humanhuman

TSL 5 BASIC

Gene TPM3, Length 2,007 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-207ENST00000341372 C6orf48Q9UBA6 75 aa6.43□□□□□ -1.38
TPM3-207ENST00000341372 TRBV30A0A0K0K1B3 111 aa6.43□□□□□ -1.38
TPM3-207ENST00000341372 HSD52Q0P140 79 aa6.43□□□□□ -1.38
TPM3-207ENST00000341372 MYCBP2O75592 4640 aa6.43□□□□□ -1.38
TPM3-207ENST00000341372 FXYD2P54710 66 aa6.42□□□□□ -1.38
TPM3-207ENST00000341372 RPL37AP61513 92 aaKnown RBP6.42□□□□□ -1.38
TPM3-207ENST00000341372 COL5A1-AS1Q5SY13 56 aa6.42□□□□□ -1.38
TPM3-207ENST00000341372 IGLV8-61A0A075B6I0 122 aa6.41□□□□□ -1.38
TPM3-207ENST00000341372 C8orf87E5RJ46 101 aa6.41□□□□□ -1.38
TPM3-207ENST00000341372 TAX1BP3O14907 124 aa6.41□□□□□ -1.38
TPM3-207ENST00000341372 C2orf82Q6UX34 121 aa6.41□□□□□ -1.38
TPM3-207ENST00000341372 DPH3Q96FX2 82 aa6.41□□□□□ -1.38
TPM3-207ENST00000341372 CXCL5P42830 114 aa6.4□□□□□ -1.38
TPM3-207ENST00000341372 C6orf99Q4VX62 202 aa6.4□□□□□ -1.38
TPM3-207ENST00000341372 LITAFQ99732 161 aa6.4□□□□□ -1.38
TPM3-207ENST00000341372 PRO0628Q9UI54 55 aa6.4□□□□□ -1.38
TPM3-207ENST00000341372 CEND1Q8N111 149 aa6.4□□□□□ -1.39
TPM3-207ENST00000341372 IGLV7-46A0A075B6I9 117 aa6.39□□□□□ -1.39
TPM3-207ENST00000341372 LGALS3P17931 250 aaKnown RBP6.39□□□□□ -1.39
TPM3-207ENST00000341372 TOMM7Q9P0U1 55 aa6.39□□□□□ -1.39
TPM3-207ENST00000341372 A0A0J9YXY3 114 aa6.38□□□□□ -1.39
TPM3-207ENST00000341372 A0A1W2PNN7 141 aa6.38□□□□□ -1.39
TPM3-207ENST00000341372 NDUFC2-KCTD14E9PQ53 114 aa6.38□□□□□ -1.39
TPM3-207ENST00000341372 H3BRM9 83 aa6.38□□□□□ -1.39
TPM3-207ENST00000341372 C7orf33Q8WU49 177 aa6.38□□□□□ -1.39
TPM3-207ENST00000341372 DMBT1Q9UGM3 2413 aaPredicted RBP6.38□□□□□ -1.39
TPM3-207ENST00000341372 CKS1BP61024 79 aa6.38□□□□□ -1.39
TPM3-207ENST00000341372 COX7B2Q8TF08 81 aa6.38□□□□□ -1.39
TPM3-207ENST00000341372 NDUFA12Q9UI09 145 aa6.38□□□□□ -1.39
TPM3-207ENST00000341372 KRTAP4-16G5E9R7 235 aaPredicted RBP6.37□□□□□ -1.39
TPM3-207ENST00000341372 C9orf116Q5BN46 136 aaPredicted RBP6.37□□□□□ -1.39
TPM3-207ENST00000341372 LINC00337Q8N6G1 96 aa6.37□□□□□ -1.39
TPM3-207ENST00000341372 PSPHP1O15172 72 aa6.37□□□□□ -1.39
TPM3-207ENST00000341372 SCGB1D4Q6XE38 83 aa6.37□□□□□ -1.39
TPM3-207ENST00000341372 ZNF625Q96I27 306 aaPredicted RBP6.37□□□□□ -1.39
TPM3-207ENST00000341372 FAT3Q8TDW7 4589 aa6.36□□□□□ -1.39
TPM3-207ENST00000341372 RBM12B-AS1Q9P1G2 102 aa6.36□□□□□ -1.39
TPM3-207ENST00000341372 A0A1B0GV72 72 aa6.35□□□□□ -1.39
TPM3-207ENST00000341372 K7ERJ3 54 aa6.35□□□□□ -1.39
TPM3-207ENST00000341372 C9orf129Q5T035 196 aaKnown RBP6.35□□□□□ -1.39
TPM3-207ENST00000341372 LRP1Q07954 4544 aaKnown RBP6.34□□□□□ -1.39
TPM3-207ENST00000341372 KRTAP29-1A8MX34 341 aaPredicted RBP6.34□□□□□ -1.39
TPM3-207ENST00000341372 KRTAP7-1Q8IUC3 87 aa6.34□□□□□ -1.39
TPM3-207ENST00000341372 SIGMAR1Q99720 223 aa6.34□□□□□ -1.39
TPM3-207ENST00000341372 FAM168BA1KXE4 195 aa6.33□□□□□ -1.4
TPM3-207ENST00000341372 NAA38Q9BRA0 125 aaKnown RBP6.33□□□□□ -1.4
TPM3-207ENST00000341372 NHP2Q9NX24 153 aaKnown RBP6.33□□□□□ -1.4
TPM3-207ENST00000341372 PSMB2P49721 201 aa6.33□□□□□ -1.4
TPM3-207ENST00000341372 MUSTN1Q8IVN3 82 aa6.33□□□□□ -1.4
TPM3-207ENST00000341372 RAB37Q96AX2 223 aa6.33□□□□□ -1.4
TPM3-207ENST00000341372 PHF5AQ7RTV0 110 aaKnown RBP6.32□□□□□ -1.4
TPM3-207ENST00000341372 SPANXDQ9BXN6 97 aa6.32□□□□□ -1.4
TPM3-207ENST00000341372 SPANXCQ9NY87 97 aa6.32□□□□□ -1.4
TPM3-207ENST00000341372 IGHV6-1A0A0B4J1U7 121 aa6.32□□□□□ -1.4
TPM3-207ENST00000341372 TIMM17BO60830 172 aa6.32□□□□□ -1.4
TPM3-207ENST00000341372 CFC1BP0CG36 223 aa6.32□□□□□ -1.4
TPM3-207ENST00000341372 CFC1P0CG37 223 aa6.32□□□□□ -1.4
TPM3-207ENST00000341372 SMIM13P0DJ93 91 aa6.32□□□□□ -1.4
TPM3-207ENST00000341372 SFTA2Q6UW10 78 aa6.32□□□□□ -1.4
TPM3-207ENST00000341372 SOSTDC1Q6X4U4 206 aa6.31□□□□□ -1.4
TPM3-207ENST00000341372 Q8N377 158 aa6.31□□□□□ -1.4
TPM3-207ENST00000341372 DAND5Q8N907 189 aa6.31□□□□□ -1.4
TPM3-207ENST00000341372 XAGE1AQ9HD64 81 aa6.3□□□□□ -1.4
TPM3-207ENST00000341372 PSORS1C2Q9UIG4 136 aa6.3□□□□□ -1.4
TPM3-207ENST00000341372 HERC1Q15751 4861 aa6.29□□□□□ -1.4
TPM3-207ENST00000341372 A0A0U1RQV1 116 aa6.29□□□□□ -1.4
TPM3-207ENST00000341372 H3BUT2 72 aa6.29□□□□□ -1.4
TPM3-207ENST00000341372 NPC2P61916 151 aa6.28□□□□□ -1.4
TPM3-207ENST00000341372 COX17Q14061 63 aa6.28□□□□□ -1.4
TPM3-207ENST00000341372 KRTAP11-1Q8IUC1 163 aa6.28□□□□□ -1.4
TPM3-207ENST00000341372 SMIM20Q8N5G0 67 aa6.28□□□□□ -1.4
TPM3-207ENST00000341372 ERG28Q9UKR5 140 aa6.28□□□□□ -1.4
TPM3-207ENST00000341372 SPINK6Q6UWN8 80 aa6.27□□□□□ -1.41
TPM3-207ENST00000341372 LINC00308Q8TCZ7 52 aa6.27□□□□□ -1.41
TPM3-207ENST00000341372 A0A1W2PPM0 123 aa6.26□□□□□ -1.41
TPM3-207ENST00000341372 C22orf24Q9Y442 160 aa6.26□□□□□ -1.41
TPM3-207ENST00000341372 IFITM1P13164 125 aa6.25□□□□□ -1.41
TPM3-207ENST00000341372 C1orf137Q5JT78 98 aa6.25□□□□□ -1.41
TPM3-207ENST00000341372 A0A0B4J2C4 111 aa6.25□□□□□ -1.41
TPM3-207ENST00000341372 UBE2BP63146 152 aa6.25□□□□□ -1.41
TPM3-207ENST00000341372 MEIG1Q5JSS6 88 aa6.25□□□□□ -1.41
TPM3-207ENST00000341372 SND1-IT1Q9HBX3 110 aa6.25□□□□□ -1.41
TPM3-207ENST00000341372 TNXBP22105 4242 aa6.24□□□□□ -1.41
TPM3-207ENST00000341372 IGLV7-43P04211 117 aa6.24□□□□□ -1.41
TPM3-207ENST00000341372 MIR7-3HGQ8N6C7 128 aa6.24□□□□□ -1.41
TPM3-207ENST00000341372 PRO1854Q9UHT4 67 aa6.24□□□□□ -1.41
TPM3-207ENST00000341372 MT1HL1P0DM35 61 aa6.23□□□□□ -1.41
TPM3-207ENST00000341372 K7EP34 96 aa6.22□□□□□ -1.41
TPM3-207ENST00000341372 IGKV2-30P06310 120 aa6.22□□□□□ -1.41
TPM3-207ENST00000341372 LINC00158P58513 81 aa6.21□□□□□ -1.41
TPM3-207ENST00000341372 LINC01600Q96MT4 127 aa6.21□□□□□ -1.41
TPM3-207ENST00000341372 LINC00167Q96N53 147 aa6.21□□□□□ -1.41
TPM3-207ENST00000341372 IGKV2-28A0A075B6P5 120 aa6.21□□□□□ -1.42
TPM3-207ENST00000341372 IGKV2D-28P01615 120 aa6.21□□□□□ -1.42
TPM3-207ENST00000341372 PMAIP1Q13794 54 aa6.21□□□□□ -1.42
TPM3-207ENST00000341372 LOC107984156A0A0G2JMH3 177 aa6.2□□□□□ -1.42
TPM3-207ENST00000341372 FABP2P12104 132 aa6.2□□□□□ -1.42
TPM3-207ENST00000341372 ARL17AQ8IVW1 177 aa6.2□□□□□ -1.42
TPM3-207ENST00000341372 Q8NDZ9 215 aa6.2□□□□□ -1.42
TPM3-207ENST00000341372 SPCS1Q9Y6A9 102 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 97 ms