RNA–Protein interactions for RNA: ENST00000341307.6

RTN3-203, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-203ENST00000341307 PSCAO43653 123 aa8□□□□□ -1.13
RTN3-203ENST00000341307 NBEAL2Q6ZNJ1 2754 aa7.99□□□□□ -1.13
RTN3-203ENST00000341307 IGKV3OR2-268A0A0C4DH90 116 aa7.99□□□□□ -1.13
RTN3-203ENST00000341307 LINC00612Q8N6U2 182 aa7.99□□□□□ -1.13
RTN3-203ENST00000341307 TRGV2A0A075B6R0 118 aa7.98□□□□□ -1.13
RTN3-203ENST00000341307 C16orf74Q96GX8 76 aa7.98□□□□□ -1.13
RTN3-203ENST00000341307 LOC100131303A0A0U1RQF7 123 aa7.97□□□□□ -1.13
RTN3-203ENST00000341307 LINC00269Q8N2A0 174 aa7.97□□□□□ -1.13
RTN3-203ENST00000341307 LCE6AA0A183 80 aa7.97□□□□□ -1.13
RTN3-203ENST00000341307 LYRM9A8MSI8 78 aa7.97□□□□□ -1.13
RTN3-203ENST00000341307 Q8NDZ9 215 aa7.96□□□□□ -1.13
RTN3-203ENST00000341307 Q6ZQY7 126 aa7.96□□□□□ -1.14
RTN3-203ENST00000341307 ZCCHC13Q8WW36 166 aaKnown RBP7.96□□□□□ -1.14
RTN3-203ENST00000341307 DEFB130BP0DP73 79 aa7.95□□□□□ -1.14
RTN3-203ENST00000341307 DEFB130AP0DP74 79 aa7.95□□□□□ -1.14
RTN3-203ENST00000341307 IGLV4-60A0A075B6I1 120 aa7.95□□□□□ -1.14
RTN3-203ENST00000341307 A6NN06 94 aa7.95□□□□□ -1.14
RTN3-203ENST00000341307 UBE2L6O14933 153 aa7.95□□□□□ -1.14
RTN3-203ENST00000341307 ZNF73O43830 326 aaPredicted RBP7.95□□□□□ -1.14
RTN3-203ENST00000341307 FAM30AQ9NZY2 134 aa7.95□□□□□ -1.14
RTN3-203ENST00000341307 MEGF8Q7Z7M0 2845 aa7.95□□□□□ -1.14
RTN3-203ENST00000341307 NDUFS5O43920 106 aa7.94□□□□□ -1.14
RTN3-203ENST00000341307 PHF5AQ7RTV0 110 aaKnown RBP7.94□□□□□ -1.14
RTN3-203ENST00000341307 CYP4F30PQ9H0H9 118 aa7.94□□□□□ -1.14
RTN3-203ENST00000341307 C8orf87E5RJ46 101 aa7.94□□□□□ -1.14
RTN3-203ENST00000341307 DEFB4AO15263 64 aa7.94□□□□□ -1.14
RTN3-203ENST00000341307 UBE2AP49459 152 aa7.94□□□□□ -1.14
RTN3-203ENST00000341307 C10orf25Q5T742 122 aa7.94□□□□□ -1.14
RTN3-203ENST00000341307 SPTSSBQ8NFR3 76 aa7.94□□□□□ -1.14
RTN3-203ENST00000341307 CELA1Q9UNI1 258 aa7.94□□□□□ -1.14
RTN3-203ENST00000341307 TRBV6-8A0A0A6YYG3 113 aa7.93□□□□□ -1.14
RTN3-203ENST00000341307 TRGV4A0A0C4DH28 118 aa7.93□□□□□ -1.14
RTN3-203ENST00000341307 DEFB135Q30KP9 77 aa7.93□□□□□ -1.14
RTN3-203ENST00000341307 X6R8D5 127 aa7.93□□□□□ -1.14
RTN3-203ENST00000341307 PRR4Q16378 134 aa7.92□□□□□ -1.14
RTN3-203ENST00000341307 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.92□□□□□ -1.14
RTN3-203ENST00000341307 LCA10Q71F78 164 aa7.92□□□□□ -1.14
RTN3-203ENST00000341307 SMIM29Q86T20 159 aa7.92□□□□□ -1.14
RTN3-203ENST00000341307 HCG22E2RYF7 251 aa7.91□□□□□ -1.14
RTN3-203ENST00000341307 CHKB-CPT1BH3BT56 60 aa7.91□□□□□ -1.14
RTN3-203ENST00000341307 ATP11AUNQ6ZP68 121 aa7.91□□□□□ -1.14
RTN3-203ENST00000341307 PRB2P02812 416 aaPredicted RBP7.9□□□□□ -1.14
RTN3-203ENST00000341307 H3BS24 57 aa7.9□□□□□ -1.15
RTN3-203ENST00000341307 FBN3Q75N90 2809 aa7.89□□□□□ -1.15
RTN3-203ENST00000341307 COX7BP24311 80 aa7.89□□□□□ -1.15
RTN3-203ENST00000341307 Q8IZM0 81 aa7.87□□□□□ -1.15
RTN3-203ENST00000341307 A0A096LPF7 62 aa7.87□□□□□ -1.15
RTN3-203ENST00000341307 H3BQ85 93 aa7.87□□□□□ -1.15
RTN3-203ENST00000341307 Q8N9P0 234 aaPredicted RBP7.87□□□□□ -1.15
RTN3-203ENST00000341307 DIRC1Q969H9 104 aa7.87□□□□□ -1.15
RTN3-203ENST00000341307 IGHV4-30-4P0DP06 118 aa7.86□□□□□ -1.15
RTN3-203ENST00000341307 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.86□□□□□ -1.15
RTN3-203ENST00000341307 C7orf65Q6ZTY9 151 aa7.86□□□□□ -1.15
RTN3-203ENST00000341307 IGHV4-28A0A0C4DH34 117 aa7.85□□□□□ -1.15
RTN3-203ENST00000341307 LINC00959A0A1B0GUT2 108 aa7.85□□□□□ -1.15
RTN3-203ENST00000341307 C9orf116Q5BN46 136 aaPredicted RBP7.85□□□□□ -1.15
RTN3-203ENST00000341307 KLK12Q9UKR0 248 aa7.85□□□□□ -1.15
RTN3-203ENST00000341307 GYPEP15421 78 aa7.84□□□□□ -1.15
RTN3-203ENST00000341307 PRR15LQ9BU68 103 aa7.84□□□□□ -1.15
RTN3-203ENST00000341307 KRTAP10-11P60412 298 aa7.83□□□□□ -1.16
RTN3-203ENST00000341307 IGLV6-57P01721 117 aa7.83□□□□□ -1.16
RTN3-203ENST00000341307 COX17Q14061 63 aa7.83□□□□□ -1.16
RTN3-203ENST00000341307 ST20-AS1Q8NBB2 130 aa7.83□□□□□ -1.16
RTN3-203ENST00000341307 LIMD2Q9BT23 127 aa7.82□□□□□ -1.16
RTN3-203ENST00000341307 TGP01266 2768 aa7.82□□□□□ -1.16
RTN3-203ENST00000341307 KIAA0087Q14695 138 aa7.82□□□□□ -1.16
RTN3-203ENST00000341307 Q8NAQ8 132 aa7.81□□□□□ -1.16
RTN3-203ENST00000341307 C3orf84H3BNL1 204 aa7.81□□□□□ -1.16
RTN3-203ENST00000341307 Q75L30 129 aa7.8□□□□□ -1.16
RTN3-203ENST00000341307 PRO0255Q9UI72 69 aa7.8□□□□□ -1.16
RTN3-203ENST00000341307 ETDCA0A1B0GVM5 59 aa7.8□□□□□ -1.16
RTN3-203ENST00000341307 HTN3P15516 51 aa7.8□□□□□ -1.16
RTN3-203ENST00000341307 PRKDCP78527 4128 aaKnown RBP7.8□□□□□ -1.16
RTN3-203ENST00000341307 DNAH3Q8TD57 4116 aa7.78□□□□□ -1.16
RTN3-203ENST00000341307 A6NED7 52 aa7.78□□□□□ -1.16
RTN3-203ENST00000341307 B9D2Q9BPU9 175 aa7.78□□□□□ -1.16
RTN3-203ENST00000341307 COL7A1Q02388 2944 aa7.78□□□□□ -1.16
RTN3-203ENST00000341307 CLPSL2Q6UWE3 100 aa7.78□□□□□ -1.16
RTN3-203ENST00000341307 HIGD2BQ4VC39 106 aa7.77□□□□□ -1.17
RTN3-203ENST00000341307 MOBPQ13875 183 aa7.77□□□□□ -1.17
RTN3-203ENST00000341307 CDC42SE1Q9NRR8 79 aa7.77□□□□□ -1.17
RTN3-203ENST00000341307 SPART-AS1P0CW21 52 aa7.75□□□□□ -1.17
RTN3-203ENST00000341307 LOC101927531A0A1B0GV80 90 aa7.75□□□□□ -1.17
RTN3-203ENST00000341307 ELOF1P60002 83 aaKnown RBP7.74□□□□□ -1.17
RTN3-203ENST00000341307 LINC00208Q96KT6 92 aa7.74□□□□□ -1.17
RTN3-203ENST00000341307 NDUFB1O75438 58 aa7.74□□□□□ -1.17
RTN3-203ENST00000341307 EGFEM1PQ0D2K5 195 aa7.72□□□□□ -1.17
RTN3-203ENST00000341307 Q9BRP9 147 aa7.72□□□□□ -1.17
RTN3-203ENST00000341307 K7EIL1 84 aa7.71□□□□□ -1.18
RTN3-203ENST00000341307 NKAPP1Q8N9T2 125 aa7.71□□□□□ -1.18
RTN3-203ENST00000341307 TENM3Q9P273 2699 aa7.7□□□□□ -1.18
RTN3-203ENST00000341307 IGLV10-54A0A075B6I4 117 aa7.7□□□□□ -1.18
RTN3-203ENST00000341307 DSCR10P59022 87 aa7.7□□□□□ -1.18
RTN3-203ENST00000341307 KPRPQ5T749 579 aaPredicted RBP7.69□□□□□ -1.18
RTN3-203ENST00000341307 PRR26Q8N8Z3 221 aa7.69□□□□□ -1.18
RTN3-203ENST00000341307 A0A1B0GUV1 79 aa7.69□□□□□ -1.18
RTN3-203ENST00000341307 K7EQZ3 153 aa7.69□□□□□ -1.18
RTN3-203ENST00000341307 UNQ6190/PRO20217Q6UXQ8 127 aa7.69□□□□□ -1.18
RTN3-203ENST00000341307 ANGP03950 147 aaKnown RBP7.68□□□□□ -1.18
RTN3-203ENST00000341307 SPANXA2-OT1Q8N9U9 137 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms