RNA–Protein interactions for RNA: ENST00000341162.8

FCF1-201, Transcript of FCF1, rRNA-processing protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FCF1, Length 4,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FCF1-201ENST00000341162 LINC00474Q9P2X8 69 aa4.62□□□□□ -1.67
FCF1-201ENST00000341162 C16orf90A8MZG2 172 aa4.62□□□□□ -1.67
FCF1-201ENST00000341162 COX7CP15954 63 aa4.62□□□□□ -1.67
FCF1-201ENST00000341162 ERC2-IT1O76042 136 aa4.61□□□□□ -1.67
FCF1-201ENST00000341162 TNP2Q05952 138 aa4.61□□□□□ -1.67
FCF1-201ENST00000341162 Q6ZQY7 126 aa4.61□□□□□ -1.67
FCF1-201ENST00000341162 C7orf33Q8WU49 177 aa4.61□□□□□ -1.67
FCF1-201ENST00000341162 PRR3P79522 188 aaKnown RBP4.6□□□□□ -1.67
FCF1-201ENST00000341162 HIGD2BQ4VC39 106 aa4.6□□□□□ -1.67
FCF1-201ENST00000341162 FAM236AA0A1B0GUQ0 79 aa4.6□□□□□ -1.67
FCF1-201ENST00000341162 FAM236BA0A1B0GV22 79 aa4.6□□□□□ -1.67
FCF1-201ENST00000341162 SPRR1BP22528 89 aa4.6□□□□□ -1.67
FCF1-201ENST00000341162 SERP2Q8N6R1 65 aa4.6□□□□□ -1.67
FCF1-201ENST00000341162 LY6G6CO95867 125 aa4.6□□□□□ -1.67
FCF1-201ENST00000341162 LAMTOR3Q9UHA4 124 aa4.59□□□□□ -1.67
FCF1-201ENST00000341162 SLPIP03973 132 aa4.59□□□□□ -1.68
FCF1-201ENST00000341162 LINC01547P58512 204 aaPredicted RBP4.59□□□□□ -1.68
FCF1-201ENST00000341162 RPL37AP61513 92 aaKnown RBP4.59□□□□□ -1.68
FCF1-201ENST00000341162 MRPL55Q7Z7F7 128 aaKnown RBP4.59□□□□□ -1.68
FCF1-201ENST00000341162 MAST4O15021 2626 aa4.59□□□□□ -1.68
FCF1-201ENST00000341162 ITPR2Q14571 2701 aa4.58□□□□□ -1.68
FCF1-201ENST00000341162 SPRR4Q96PI1 79 aa4.58□□□□□ -1.68
FCF1-201ENST00000341162 FAM229AH3BQW9 127 aa4.58□□□□□ -1.68
FCF1-201ENST00000341162 HELZ2Q9BYK8 2649 aaKnown RBP4.58□□□□□ -1.68
FCF1-201ENST00000341162 HUWE1Q7Z6Z7 4374 aaKnown RBP4.58□□□□□ -1.68
FCF1-201ENST00000341162 XAGE1AQ9HD64 81 aa4.58□□□□□ -1.68
FCF1-201ENST00000341162 GCN1Q92616 2671 aaKnown RBP4.58□□□□□ -1.68
FCF1-201ENST00000341162 Q6ZVQ6 151 aa4.57□□□□□ -1.68
FCF1-201ENST00000341162 SERTAD4-AS1Q5TG53 156 aa4.57□□□□□ -1.68
FCF1-201ENST00000341162 REG3GQ6UW15 175 aa4.57□□□□□ -1.68
FCF1-201ENST00000341162 NOTCH1P46531 2555 aa4.56□□□□□ -1.68
FCF1-201ENST00000341162 TRRAPQ9Y4A5 3859 aa4.56□□□□□ -1.68
FCF1-201ENST00000341162 ETDCA0A1B0GVM5 59 aa4.56□□□□□ -1.68
FCF1-201ENST00000341162 J3QL48 77 aa4.56□□□□□ -1.68
FCF1-201ENST00000341162 RPS28P62857 69 aaKnown RBP4.56□□□□□ -1.68
FCF1-201ENST00000341162 TRAV7A0A075B6U4 112 aa4.55□□□□□ -1.68
FCF1-201ENST00000341162 TMEM258P61165 79 aa4.55□□□□□ -1.68
FCF1-201ENST00000341162 A0A0U1RQV1 116 aa4.55□□□□□ -1.68
FCF1-201ENST00000341162 Q8N377 158 aa4.55□□□□□ -1.68
FCF1-201ENST00000341162 TEP1Q99973 2627 aaKnown RBP4.54□□□□□ -1.68
FCF1-201ENST00000341162 NDUFC1O43677 76 aa4.54□□□□□ -1.68
FCF1-201ENST00000341162 ATP5EP56381 51 aaPredicted RBP4.54□□□□□ -1.68
FCF1-201ENST00000341162 ATRQ13535 2644 aa4.54□□□□□ -1.68
FCF1-201ENST00000341162 DNAH9Q9NYC9 4486 aa4.54□□□□□ -1.68
FCF1-201ENST00000341162 FUSP35637 526 aaKnown RBP eCLIP4.54□□□□□ -1.68
FCF1-201ENST00000341162 KRTAP7-1Q8IUC3 87 aa4.54□□□□□ -1.68
FCF1-201ENST00000341162 C9orf163Q8N9P6 203 aa4.54□□□□□ -1.68
FCF1-201ENST00000341162 PLA2G1BP04054 148 aaKnown RBP4.54□□□□□ -1.68
FCF1-201ENST00000341162 Q8NBF4 154 aa4.54□□□□□ -1.68
FCF1-201ENST00000341162 CCDC179H3BU77 68 aa4.53□□□□□ -1.68
FCF1-201ENST00000341162 Q6ZRN7 208 aaPredicted RBP4.53□□□□□ -1.68
FCF1-201ENST00000341162 HIVEP1P15822 2718 aa4.53□□□□□ -1.68
FCF1-201ENST00000341162 NBDYA0A0U1RRE5 68 aa4.53□□□□□ -1.68
FCF1-201ENST00000341162 LCE2DQ5TA82 110 aaPredicted RBP4.53□□□□□ -1.68
FCF1-201ENST00000341162 C1orf134Q5TEV5 83 aa4.53□□□□□ -1.68
FCF1-201ENST00000341162 Q9BRP9 147 aa4.53□□□□□ -1.68
FCF1-201ENST00000341162 LRCOL1A6NCL2 159 aa4.53□□□□□ -1.68
FCF1-201ENST00000341162 LYSTQ99698 3801 aa4.53□□□□□ -1.68
FCF1-201ENST00000341162 C9orf153Q5TBE3 101 aa4.52□□□□□ -1.69
FCF1-201ENST00000341162 KLKP1Q107X0 134 aa4.51□□□□□ -1.69
FCF1-201ENST00000341162 KRTAP3-3Q9BYR6 98 aa4.51□□□□□ -1.69
FCF1-201ENST00000341162 KRTAP3-2Q9BYR7 98 aa4.51□□□□□ -1.69
FCF1-201ENST00000341162 FRAS1Q86XX4 4008 aa4.51□□□□□ -1.69
FCF1-201ENST00000341162 LCE6AA0A183 80 aa4.51□□□□□ -1.69
FCF1-201ENST00000341162 KRTAP13-1Q8IUC0 172 aa4.5□□□□□ -1.69
FCF1-201ENST00000341162 NF1P21359 2839 aa4.5□□□□□ -1.69
FCF1-201ENST00000341162 F8P00451 2351 aa4.5□□□□□ -1.69
FCF1-201ENST00000341162 IGKV3D-7A0A0C4DH55 119 aa4.5□□□□□ -1.69
FCF1-201ENST00000341162 F8WEM9 126 aa4.5□□□□□ -1.69
FCF1-201ENST00000341162 MGAM2Q2M2H8 2515 aa4.5□□□□□ -1.69
FCF1-201ENST00000341162 LINC00483Q53H64 154 aa4.49□□□□□ -1.69
FCF1-201ENST00000341162 SMIM29Q86T20 159 aa4.49□□□□□ -1.69
FCF1-201ENST00000341162 ALMS1Q8TCU4 4167 aa4.49□□□□□ -1.69
FCF1-201ENST00000341162 ZNF706Q9Y5V0 76 aaPredicted RBP4.49□□□□□ -1.69
FCF1-201ENST00000341162 A0A096LNI7 61 aa4.49□□□□□ -1.69
FCF1-201ENST00000341162 CASC10Q5T4H9 136 aa4.49□□□□□ -1.69
FCF1-201ENST00000341162 KRTAP1-5Q9BYS1 174 aa4.49□□□□□ -1.69
FCF1-201ENST00000341162 NREPQ16612 68 aa4.48□□□□□ -1.69
FCF1-201ENST00000341162 C1orf137Q5JT78 98 aa4.48□□□□□ -1.69
FCF1-201ENST00000341162 IGKV4-1P06312 121 aa4.48□□□□□ -1.69
FCF1-201ENST00000341162 Q6ZR54 194 aa4.48□□□□□ -1.69
FCF1-201ENST00000341162 SPACA4Q8TDM5 124 aa4.48□□□□□ -1.69
FCF1-201ENST00000341162 J3KT08 172 aa4.47□□□□□ -1.69
FCF1-201ENST00000341162 A0A1W2PNM2 257 aa4.46□□□□□ -1.69
FCF1-201ENST00000341162 VPS13DQ5THJ4 4388 aa4.46□□□□□ -1.7
FCF1-201ENST00000341162 BPY2O14599 106 aa4.46□□□□□ -1.7
FCF1-201ENST00000341162 FAM19A5Q7Z5A7 132 aaPredicted RBP4.46□□□□□ -1.7
FCF1-201ENST00000341162 TENM1Q9UKZ4 2725 aa4.46□□□□□ -1.7
FCF1-201ENST00000341162 FAM168BA1KXE4 195 aa4.45□□□□□ -1.7
FCF1-201ENST00000341162 PLAC8Q9NZF1 115 aa4.45□□□□□ -1.7
FCF1-201ENST00000341162 H3BPC8 53 aa4.45□□□□□ -1.7
FCF1-201ENST00000341162 MDFIQ99750 246 aa4.45□□□□□ -1.7
FCF1-201ENST00000341162 FAM19A1Q7Z5A9 133 aa4.45□□□□□ -1.7
FCF1-201ENST00000341162 M0R2N4 97 aa4.45□□□□□ -1.7
FCF1-201ENST00000341162 UBE2BP63146 152 aa4.45□□□□□ -1.7
FCF1-201ENST00000341162 VWFP04275 2813 aa4.45□□□□□ -1.7
FCF1-201ENST00000341162 A0A1W2PNN7 141 aa4.44□□□□□ -1.7
FCF1-201ENST00000341162 HAMPP81172 84 aa4.44□□□□□ -1.7
FCF1-201ENST00000341162 LINC00476Q8WZB0 136 aa4.44□□□□□ -1.7
FCF1-201ENST00000341162 OCR1Q9BZK8 76 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 101.8 ms