RNA–Protein interactions for RNA: ENST00000341060.3

TDP2-201, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TDP2, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-201ENST00000341060 CXCL6P80162 114 aa9.5□□□□□ -0.89
TDP2-201ENST00000341060 HAMPP81172 84 aa9.5□□□□□ -0.89
TDP2-201ENST00000341060 NKAPP1Q8N9T2 125 aa9.5□□□□□ -0.89
TDP2-201ENST00000341060 DNHD1Q96M86 4753 aa9.5□□□□□ -0.89
TDP2-201ENST00000341060 TRAV10A0A0B4J240 114 aa9.49□□□□□ -0.89
TDP2-201ENST00000341060 SERTAD4-AS1Q5TG53 156 aa9.49□□□□□ -0.89
TDP2-201ENST00000341060 C7orf33Q8WU49 177 aa9.48□□□□□ -0.89
TDP2-201ENST00000341060 LINC00588Q9Y4M8 146 aa9.48□□□□□ -0.89
TDP2-201ENST00000341060 PLA2G2DQ9UNK4 145 aa9.47□□□□□ -0.89
TDP2-201ENST00000341060 MRAPQ8TCY5 172 aa9.47□□□□□ -0.89
TDP2-201ENST00000341060 BCE1O60756 84 aa9.46□□□□□ -0.9
TDP2-201ENST00000341060 TMEM258P61165 79 aa9.45□□□□□ -0.9
TDP2-201ENST00000341060 TM2D3Q9BRN9 247 aa9.44□□□□□ -0.9
TDP2-201ENST00000341060 IGLV5-37A0A075B6J1 123 aa9.43□□□□□ -0.9
TDP2-201ENST00000341060 DNAH1Q9P2D7 4330 aa9.43□□□□□ -0.9
TDP2-201ENST00000341060 CASC10Q5T4H9 136 aa9.43□□□□□ -0.9
TDP2-201ENST00000341060 K7EIL1 84 aa9.42□□□□□ -0.9
TDP2-201ENST00000341060 Q6ZRX8 168 aa9.42□□□□□ -0.9
TDP2-201ENST00000341060 PRYO14603 147 aa9.41□□□□□ -0.9
TDP2-201ENST00000341060 RMI2Q96E14 147 aa9.41□□□□□ -0.9
TDP2-201ENST00000341060 IGLV1-50A0A075B6I6 118 aa9.41□□□□□ -0.9
TDP2-201ENST00000341060 FAM168BA1KXE4 195 aa9.41□□□□□ -0.9
TDP2-201ENST00000341060 KRTAP4-16G5E9R7 235 aaPredicted RBP9.41□□□□□ -0.9
TDP2-201ENST00000341060 DHRS4-AS1Q9P1J3 65 aa9.41□□□□□ -0.9
TDP2-201ENST00000341060 TRAV7A0A075B6U4 112 aa9.4□□□□□ -0.9
TDP2-201ENST00000341060 J3KT08 172 aa9.4□□□□□ -0.9
TDP2-201ENST00000341060 Q8N377 158 aa9.4□□□□□ -0.9
TDP2-201ENST00000341060 RPL37AP8A6NKH3 93 aa9.4□□□□□ -0.91
TDP2-201ENST00000341060 SPRR1AP35321 89 aa9.4□□□□□ -0.91
TDP2-201ENST00000341060 IGLV5-48A0A075B6I7 105 aa9.39□□□□□ -0.91
TDP2-201ENST00000341060 SCXQ7RTU7 201 aa9.39□□□□□ -0.91
TDP2-201ENST00000341060 SVIPQ8NHG7 77 aa9.38□□□□□ -0.91
TDP2-201ENST00000341060 Q9BRP9 147 aa9.38□□□□□ -0.91
TDP2-201ENST00000341060 RPS28P62857 69 aaKnown RBP9.38□□□□□ -0.91
TDP2-201ENST00000341060 KRTAP7-1Q8IUC3 87 aa9.38□□□□□ -0.91
TDP2-201ENST00000341060 DEFB105AQ8NG35 78 aa9.38□□□□□ -0.91
TDP2-201ENST00000341060 C20orf197Q8N268 126 aa9.37□□□□□ -0.91
TDP2-201ENST00000341060 HUWE1Q7Z6Z7 4374 aaKnown RBP9.37□□□□□ -0.91
TDP2-201ENST00000341060 COL7A1Q02388 2944 aa9.37□□□□□ -0.91
TDP2-201ENST00000341060 LOC107984640A0A0U1RRK4 108 aa9.36□□□□□ -0.91
TDP2-201ENST00000341060 ETDCA0A1B0GVM5 59 aa9.36□□□□□ -0.91
TDP2-201ENST00000341060 MRPL55Q7Z7F7 128 aaKnown RBP9.35□□□□□ -0.91
TDP2-201ENST00000341060 DPH3Q96FX2 82 aa9.35□□□□□ -0.91
TDP2-201ENST00000341060 NREPQ16612 68 aa9.34□□□□□ -0.91
TDP2-201ENST00000341060 C3orf84H3BNL1 204 aa9.33□□□□□ -0.92
TDP2-201ENST00000341060 TNP2Q05952 138 aa9.33□□□□□ -0.92
TDP2-201ENST00000341060 FAM19A5Q7Z5A7 132 aaPredicted RBP9.33□□□□□ -0.92
TDP2-201ENST00000341060 MEGF8Q7Z7M0 2845 aa9.33□□□□□ -0.92
TDP2-201ENST00000341060 A0A1B0GW54 56 aa9.32□□□□□ -0.92
TDP2-201ENST00000341060 KLKP1Q107X0 134 aa9.32□□□□□ -0.92
TDP2-201ENST00000341060 LYSTQ99698 3801 aa9.31□□□□□ -0.92
TDP2-201ENST00000341060 IGKV4-1P06312 121 aa9.31□□□□□ -0.92
TDP2-201ENST00000341060 FUSP35637 526 aaKnown RBP eCLIP9.31□□□□□ -0.92
TDP2-201ENST00000341060 ST20-AS1Q8NBB2 130 aa9.3□□□□□ -0.92
TDP2-201ENST00000341060 H7BZZ5 65 aa9.29□□□□□ -0.92
TDP2-201ENST00000341060 BPY2O14599 106 aa9.29□□□□□ -0.92
TDP2-201ENST00000341060 C1orf137Q5JT78 98 aa9.29□□□□□ -0.92
TDP2-201ENST00000341060 Q8N9L7 120 aa9.29□□□□□ -0.92
TDP2-201ENST00000341060 A0A1W2PNM2 257 aa9.28□□□□□ -0.92
TDP2-201ENST00000341060 STAB2Q8WWQ8 2551 aa9.28□□□□□ -0.92
TDP2-201ENST00000341060 ERC2-IT1O76042 136 aa9.28□□□□□ -0.92
TDP2-201ENST00000341060 REG3GQ6UW15 175 aa9.28□□□□□ -0.92
TDP2-201ENST00000341060 UBE2BP63146 152 aa9.27□□□□□ -0.93
TDP2-201ENST00000341060 KRTAP1-5Q9BYS1 174 aa9.27□□□□□ -0.93
TDP2-201ENST00000341060 DNAH9Q9NYC9 4486 aa9.27□□□□□ -0.93
TDP2-201ENST00000341060 KRTAP21-3Q3LHN1 58 aa9.26□□□□□ -0.93
TDP2-201ENST00000341060 Q8NBF4 154 aa9.26□□□□□ -0.93
TDP2-201ENST00000341060 PRKDCP78527 4128 aaKnown RBP9.26□□□□□ -0.93
TDP2-201ENST00000341060 SPRR4Q96PI1 79 aa9.25□□□□□ -0.93
TDP2-201ENST00000341060 FAM236DA0A1B0GTK5 79 aa9.25□□□□□ -0.93
TDP2-201ENST00000341060 C16orf90A8MZG2 172 aa9.25□□□□□ -0.93
TDP2-201ENST00000341060 FAM236CP0DP71 79 aa9.25□□□□□ -0.93
TDP2-201ENST00000341060 CNBPP62633 177 aaKnown RBP9.25□□□□□ -0.93
TDP2-201ENST00000341060 SNURFQ9Y675 71 aa9.25□□□□□ -0.93
TDP2-201ENST00000341060 A0A096LNI7 61 aa9.24□□□□□ -0.93
TDP2-201ENST00000341060 OXTP01178 125 aa9.24□□□□□ -0.93
TDP2-201ENST00000341060 DNAH10Q8IVF4 4471 aa9.23□□□□□ -0.93
TDP2-201ENST00000341060 SMIM29Q86T20 159 aa9.21□□□□□ -0.94
TDP2-201ENST00000341060 B9D2Q9BPU9 175 aa9.21□□□□□ -0.94
TDP2-201ENST00000341060 OCR1Q9BZK8 76 aa9.21□□□□□ -0.94
TDP2-201ENST00000341060 IGKV2-24A0A0C4DH68 120 aa9.2□□□□□ -0.94
TDP2-201ENST00000341060 PSCAO43653 123 aa9.2□□□□□ -0.94
TDP2-201ENST00000341060 NDUFC1O43677 76 aa9.2□□□□□ -0.94
TDP2-201ENST00000341060 F8WEM9 126 aa9.19□□□□□ -0.94
TDP2-201ENST00000341060 TMEM254Q8TBM7 123 aa9.19□□□□□ -0.94
TDP2-201ENST00000341060 A0A1W2PNN7 141 aa9.19□□□□□ -0.94
TDP2-201ENST00000341060 UBE2DNLQ8IWF7 75 aa9.18□□□□□ -0.94
TDP2-201ENST00000341060 APLNQ9ULZ1 77 aa9.18□□□□□ -0.94
TDP2-201ENST00000341060 LINC00476Q8WZB0 136 aa9.17□□□□□ -0.94
TDP2-201ENST00000341060 PRLHP81277 87 aa9.17□□□□□ -0.94
TDP2-201ENST00000341060 C14orf177Q52M58 125 aa9.16□□□□□ -0.94
TDP2-201ENST00000341060 CSMD3Q7Z407 3707 aa9.16□□□□□ -0.94
TDP2-201ENST00000341060 DNAH7Q8WXX0 4024 aa9.16□□□□□ -0.94
TDP2-201ENST00000341060 EPM2AB3EWF7 344 aa9.15□□□□□ -0.94
TDP2-201ENST00000341060 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.14□□□□□ -0.95
TDP2-201ENST00000341060 DSCR10P59022 87 aa9.14□□□□□ -0.95
TDP2-201ENST00000341060 SERP1Q9Y6X1 66 aa9.14□□□□□ -0.95
TDP2-201ENST00000341060 IGFL1Q6UW32 110 aa9.14□□□□□ -0.95
TDP2-201ENST00000341060 FBN3Q75N90 2809 aa9.14□□□□□ -0.95
TDP2-201ENST00000341060 DYNC2H1Q8NCM8 4307 aaKnown RBP9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 103.8 ms