RNA–Protein interactions for RNA: ENST00000340541.4

VAPA-201, Transcript of VAMP associated protein A, humanhuman

TSL 5 BASIC

Gene VAPA, Length 1,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-201ENST00000340541 AKR1D1P51857 326 aa9.03□□□□□ -0.96
VAPA-201ENST00000340541 PCP2Q8IVA1 136 aa9.03□□□□□ -0.96
VAPA-201ENST00000340541 ETDCA0A1B0GVM5 59 aa9.02□□□□□ -0.97
VAPA-201ENST00000340541 B5MCH6 92 aa9.02□□□□□ -0.97
VAPA-201ENST00000340541 S100A6P06703 90 aa9.02□□□□□ -0.97
VAPA-201ENST00000340541 TYMSOSQ8TAI1 123 aa9.02□□□□□ -0.97
VAPA-201ENST00000340541 SMCR5Q8TEV8 140 aa9.02□□□□□ -0.97
VAPA-201ENST00000340541 SPRR4Q96PI1 79 aa9.02□□□□□ -0.97
VAPA-201ENST00000340541 SPANXCQ9NY87 97 aa9.02□□□□□ -0.97
VAPA-201ENST00000340541 SNRPEP62304 92 aaKnown RBP9.01□□□□□ -0.97
VAPA-201ENST00000340541 S100A12P80511 92 aa9.01□□□□□ -0.97
VAPA-201ENST00000340541 S100A7L2Q5SY68 101 aa9.01□□□□□ -0.97
VAPA-201ENST00000340541 SPANXDQ9BXN6 97 aa9□□□□□ -0.97
VAPA-201ENST00000340541 TRAV23DV6A0A075B6W5 121 aa8.99□□□□□ -0.97
VAPA-201ENST00000340541 C5orf52A6NGY3 159 aa8.99□□□□□ -0.97
VAPA-201ENST00000340541 SCGB1D4Q6XE38 83 aa8.99□□□□□ -0.97
VAPA-201ENST00000340541 Q9BRP9 147 aa8.99□□□□□ -0.97
VAPA-201ENST00000340541 ERC2-IT1O76042 136 aa8.98□□□□□ -0.97
VAPA-201ENST00000340541 Q6ZRX8 168 aa8.98□□□□□ -0.97
VAPA-201ENST00000340541 ZNF73O43830 326 aaPredicted RBP8.97□□□□□ -0.97
VAPA-201ENST00000340541 C3orf22Q8N5N4 141 aa8.97□□□□□ -0.97
VAPA-201ENST00000340541 ZNF706Q9Y5V0 76 aaPredicted RBP8.97□□□□□ -0.97
VAPA-201ENST00000340541 LPAP08519 4548 aa8.96□□□□□ -0.97
VAPA-201ENST00000340541 PPDPFQ9H3Y8 114 aa8.96□□□□□ -0.98
VAPA-201ENST00000340541 TSPAN13O95857 204 aa8.95□□□□□ -0.98
VAPA-201ENST00000340541 IFITM1P13164 125 aa8.94□□□□□ -0.98
VAPA-201ENST00000340541 PRR4Q16378 134 aa8.94□□□□□ -0.98
VAPA-201ENST00000340541 LINC00483Q53H64 154 aa8.94□□□□□ -0.98
VAPA-201ENST00000340541 Q6ZVH6 145 aa8.94□□□□□ -0.98
VAPA-201ENST00000340541 LINC00518Q8N0U6 118 aa8.93□□□□□ -0.98
VAPA-201ENST00000340541 LINC00304Q8N9R0 145 aa8.93□□□□□ -0.98
VAPA-201ENST00000340541 OR13C6PQ8NH95 151 aa8.93□□□□□ -0.98
VAPA-201ENST00000340541 MUSTN1Q8IVN3 82 aa8.92□□□□□ -0.98
VAPA-201ENST00000340541 HSBP1L1C9JCN9 74 aa8.91□□□□□ -0.98
VAPA-201ENST00000340541 CBY1Q9Y3M2 126 aa8.91□□□□□ -0.98
VAPA-201ENST00000340541 SCGB1D1O95968 90 aa8.9□□□□□ -0.98
VAPA-201ENST00000340541 JOSD1Q15040 202 aaPredicted RBP8.9□□□□□ -0.98
VAPA-201ENST00000340541 GAGE2AQ6NT46 116 aa8.9□□□□□ -0.98
VAPA-201ENST00000340541 COPS9Q8WXC6 57 aa8.9□□□□□ -0.98
VAPA-201ENST00000340541 A0A0U1RQV1 116 aa8.88□□□□□ -0.99
VAPA-201ENST00000340541 ST20-AS1Q8NBB2 130 aa8.87□□□□□ -0.99
VAPA-201ENST00000340541 HINT1P49773 126 aaPredicted RBP8.86□□□□□ -0.99
VAPA-201ENST00000340541 ELOF1P60002 83 aaKnown RBP8.86□□□□□ -0.99
VAPA-201ENST00000340541 CTAG1AP78358 180 aa8.86□□□□□ -0.99
VAPA-201ENST00000340541 C6orf99Q4VX62 202 aa8.86□□□□□ -0.99
VAPA-201ENST00000340541 Q8NBF4 154 aa8.85□□□□□ -0.99
VAPA-201ENST00000340541 A6NDN8 102 aa8.84□□□□□ -0.99
VAPA-201ENST00000340541 COX7BP24311 80 aa8.84□□□□□ -0.99
VAPA-201ENST00000340541 COX8AP10176 69 aa8.83□□□□□ -1
VAPA-201ENST00000340541 SPAG11AQ6PDA7 123 aa8.83□□□□□ -1
VAPA-201ENST00000340541 RETNLBQ9BQ08 111 aa8.83□□□□□ -1
VAPA-201ENST00000340541 DHRS4-AS1Q9P1J3 65 aa8.83□□□□□ -1
VAPA-201ENST00000340541 IGLV9-49A0A0B4J1Y8 123 aa8.82□□□□□ -1
VAPA-201ENST00000340541 TRBV7-6A0A0J9YX20 115 aa8.82□□□□□ -1
VAPA-201ENST00000340541 MOBPQ13875 183 aa8.82□□□□□ -1
VAPA-201ENST00000340541 TRAV13-2A0A0B4J235 113 aa8.81□□□□□ -1
VAPA-201ENST00000340541 DLEU1O43261 78 aa8.81□□□□□ -1
VAPA-201ENST00000340541 SPRR1BP22528 89 aa8.81□□□□□ -1
VAPA-201ENST00000340541 MUC2Q02817 5179 aa8.81□□□□□ -1
VAPA-201ENST00000340541 A4D1N5 150 aa8.8□□□□□ -1
VAPA-201ENST00000340541 SSBP3-AS1Q7Z2R9 100 aa8.8□□□□□ -1
VAPA-201ENST00000340541 SMIM11BQ8TCY0 68 aa8.79□□□□□ -1
VAPA-201ENST00000340541 A0A1B0GWB2 263 aa8.78□□□□□ -1
VAPA-201ENST00000340541 C14orf144Q96I85 54 aa8.78□□□□□ -1
VAPA-201ENST00000340541 PAM16Q9Y3D7 125 aa8.78□□□□□ -1
VAPA-201ENST00000340541 SPINK1P00995 79 aa8.76□□□□□ -1.01
VAPA-201ENST00000340541 SPATA45Q537H7 98 aa8.76□□□□□ -1.01
VAPA-201ENST00000340541 TMA7Q9Y2S6 64 aaKnown RBP8.76□□□□□ -1.01
VAPA-201ENST00000340541 HIST1H4GQ99525 98 aa8.75□□□□□ -1.01
VAPA-201ENST00000340541 VAMP8Q9BV40 100 aa8.75□□□□□ -1.01
VAPA-201ENST00000340541 LINC01547P58512 204 aaPredicted RBP8.74□□□□□ -1.01
VAPA-201ENST00000340541 C9orf153Q5TBE3 101 aa8.74□□□□□ -1.01
VAPA-201ENST00000340541 C2orf91Q6ZV80 131 aa8.74□□□□□ -1.01
VAPA-201ENST00000340541 C12orf57Q99622 126 aa8.73□□□□□ -1.01
VAPA-201ENST00000340541 HIGD1BQ9P298 99 aa8.73□□□□□ -1.01
VAPA-201ENST00000340541 IGLV5-48A0A075B6I7 105 aa8.72□□□□□ -1.01
VAPA-201ENST00000340541 IGLV7-46A0A075B6I9 117 aa8.72□□□□□ -1.01
VAPA-201ENST00000340541 RPS29P62273 56 aaKnown RBP8.72□□□□□ -1.01
VAPA-201ENST00000340541 PYY3Q5JQD4 70 aa8.72□□□□□ -1.01
VAPA-201ENST00000340541 TAL2Q16559 108 aa8.71□□□□□ -1.02
VAPA-201ENST00000340541 TPRXLQ17RH7 258 aa8.71□□□□□ -1.02
VAPA-201ENST00000340541 SLC25A34Q6PIV7 304 aa8.71□□□□□ -1.02
VAPA-201ENST00000340541 SMIM29Q86T20 159 aa8.71□□□□□ -1.02
VAPA-201ENST00000340541 DEFB105AQ8NG35 78 aa8.71□□□□□ -1.02
VAPA-201ENST00000340541 TEX49A0A1B0GTD5 131 aa8.7□□□□□ -1.02
VAPA-201ENST00000340541 Q8N377 158 aa8.7□□□□□ -1.02
VAPA-201ENST00000340541 LAMTOR3Q9UHA4 124 aa8.7□□□□□ -1.02
VAPA-201ENST00000340541 Q1RN00 199 aa8.69□□□□□ -1.02
VAPA-201ENST00000340541 FP248Q71RG6 208 aaPredicted RBP8.69□□□□□ -1.02
VAPA-201ENST00000340541 CFC1BP0CG36 223 aa8.68□□□□□ -1.02
VAPA-201ENST00000340541 CFC1P0CG37 223 aa8.68□□□□□ -1.02
VAPA-201ENST00000340541 LINC00575Q6W349 94 aa8.68□□□□□ -1.02
VAPA-201ENST00000340541 CDIP1Q9H305 208 aa8.68□□□□□ -1.02
VAPA-201ENST00000340541 NHP2Q9NX24 153 aaKnown RBP8.68□□□□□ -1.02
VAPA-201ENST00000340541 VAMP3Q15836 100 aa8.67□□□□□ -1.02
VAPA-201ENST00000340541 KRTAP9-2Q9BYQ4 174 aa8.67□□□□□ -1.02
VAPA-201ENST00000340541 SLC25A20O43772 301 aa8.64□□□□□ -1.03
VAPA-201ENST00000340541 A0A0B4J2C4 111 aa8.63□□□□□ -1.03
VAPA-201ENST00000340541 LOC100996750A0A140TA64 210 aa8.63□□□□□ -1.03
VAPA-201ENST00000340541 CEND1Q8N111 149 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms