RNA–Protein interactions for RNA: ENST00000337354.8

SEC13-201, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SEC13, Length 1,363 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-201ENST00000337354 H0Y9J4 135 aa9.37□□□□□ -0.91
SEC13-201ENST00000337354 FAM19A1Q7Z5A9 133 aa9.37□□□□□ -0.91
SEC13-201ENST00000337354 A6NDN8 102 aa9.36□□□□□ -0.91
SEC13-201ENST00000337354 KRTAP13-1Q8IUC0 172 aa9.36□□□□□ -0.91
SEC13-201ENST00000337354 KRTAP4-16G5E9R7 235 aaPredicted RBP9.35□□□□□ -0.91
SEC13-201ENST00000337354 HINT1P49773 126 aaPredicted RBP9.35□□□□□ -0.91
SEC13-201ENST00000337354 ETDCA0A1B0GVM5 59 aa9.34□□□□□ -0.91
SEC13-201ENST00000337354 ZNF73O43830 326 aaPredicted RBP9.34□□□□□ -0.91
SEC13-201ENST00000337354 CEND1Q8N111 149 aa9.34□□□□□ -0.91
SEC13-201ENST00000337354 MYCBP2O75592 4640 aa9.32□□□□□ -0.92
SEC13-201ENST00000337354 J3QL48 77 aa9.32□□□□□ -0.92
SEC13-201ENST00000337354 PRLHP81277 87 aa9.32□□□□□ -0.92
SEC13-201ENST00000337354 HSD52Q0P140 79 aa9.32□□□□□ -0.92
SEC13-201ENST00000337354 TMEM238LA0A1B0GVL6 79 aa9.31□□□□□ -0.92
SEC13-201ENST00000337354 A6NJY4 79 aa9.31□□□□□ -0.92
SEC13-201ENST00000337354 OXTP01178 125 aa9.31□□□□□ -0.92
SEC13-201ENST00000337354 C12orf57Q99622 126 aa9.31□□□□□ -0.92
SEC13-201ENST00000337354 DMBT1Q9UGM3 2413 aaPredicted RBP9.3□□□□□ -0.92
SEC13-201ENST00000337354 B5MCH6 92 aa9.3□□□□□ -0.92
SEC13-201ENST00000337354 Q6ZRX8 168 aa9.29□□□□□ -0.92
SEC13-201ENST00000337354 PRO1933Q9H354 126 aa9.29□□□□□ -0.92
SEC13-201ENST00000337354 PKHD1L1Q86WI1 4243 aa9.29□□□□□ -0.92
SEC13-201ENST00000337354 TRBV7-6A0A0J9YX20 115 aa9.28□□□□□ -0.92
SEC13-201ENST00000337354 KRTAP29-1A8MX34 341 aaPredicted RBP9.28□□□□□ -0.92
SEC13-201ENST00000337354 CFC1BP0CG36 223 aa9.28□□□□□ -0.92
SEC13-201ENST00000337354 CFC1P0CG37 223 aa9.28□□□□□ -0.92
SEC13-201ENST00000337354 A0A0B4J2C4 111 aa9.27□□□□□ -0.93
SEC13-201ENST00000337354 TSTD3H0UI37 97 aa9.27□□□□□ -0.93
SEC13-201ENST00000337354 C6orf99Q4VX62 202 aa9.27□□□□□ -0.93
SEC13-201ENST00000337354 RAB37Q96AX2 223 aa9.27□□□□□ -0.93
SEC13-201ENST00000337354 HIGD2AQ9BW72 106 aa9.27□□□□□ -0.93
SEC13-201ENST00000337354 FXYD2P54710 66 aa9.25□□□□□ -0.93
SEC13-201ENST00000337354 SMIM11BQ8TCY0 68 aa9.25□□□□□ -0.93
SEC13-201ENST00000337354 LINC01600Q96MT4 127 aa9.25□□□□□ -0.93
SEC13-201ENST00000337354 A0A1B0GWB2 263 aa9.24□□□□□ -0.93
SEC13-201ENST00000337354 COX7BP24311 80 aa9.24□□□□□ -0.93
SEC13-201ENST00000337354 SMCR5Q8TEV8 140 aa9.24□□□□□ -0.93
SEC13-201ENST00000337354 RPL13AP40429 203 aaKnown RBP9.24□□□□□ -0.93
SEC13-201ENST00000337354 ELOF1P60002 83 aaKnown RBP9.24□□□□□ -0.93
SEC13-201ENST00000337354 VAMP3Q15836 100 aa9.24□□□□□ -0.93
SEC13-201ENST00000337354 DHRS4-AS1Q9P1J3 65 aa9.24□□□□□ -0.93
SEC13-201ENST00000337354 KRTAP1-4P0C5Y4 121 aa9.23□□□□□ -0.93
SEC13-201ENST00000337354 Q9BRP9 147 aa9.23□□□□□ -0.93
SEC13-201ENST00000337354 PRO1854Q9UHT4 67 aa9.23□□□□□ -0.93
SEC13-201ENST00000337354 ZNF706Q9Y5V0 76 aaPredicted RBP9.23□□□□□ -0.93
SEC13-201ENST00000337354 CTAG1AP78358 180 aa9.2□□□□□ -0.94
SEC13-201ENST00000337354 BVES-AS1Q5T3Y7 98 aa9.2□□□□□ -0.94
SEC13-201ENST00000337354 NHP2Q9NX24 153 aaKnown RBP9.2□□□□□ -0.94
SEC13-201ENST00000337354 M0R143 59 aa9.19□□□□□ -0.94
SEC13-201ENST00000337354 SPRR4Q96PI1 79 aa9.19□□□□□ -0.94
SEC13-201ENST00000337354 ERC2-IT1O76042 136 aa9.18□□□□□ -0.94
SEC13-201ENST00000337354 FAM229BQ4G0N7 80 aa9.18□□□□□ -0.94
SEC13-201ENST00000337354 FAT3Q8TDW7 4589 aa9.18□□□□□ -0.94
SEC13-201ENST00000337354 LRP1Q07954 4544 aaKnown RBP9.18□□□□□ -0.94
SEC13-201ENST00000337354 H7C2G1 150 aa9.17□□□□□ -0.94
SEC13-201ENST00000337354 KRTAP10-8P60410 259 aa9.17□□□□□ -0.94
SEC13-201ENST00000337354 HERC1Q15751 4861 aa9.16□□□□□ -0.94
SEC13-201ENST00000337354 CRYGAP11844 174 aa9.16□□□□□ -0.94
SEC13-201ENST00000337354 SLC25A20O43772 301 aa9.15□□□□□ -0.94
SEC13-201ENST00000337354 Q1RN00 199 aa9.15□□□□□ -0.94
SEC13-201ENST00000337354 H0YGX0 51 aa9.14□□□□□ -0.95
SEC13-201ENST00000337354 MT1HL1P0DM35 61 aa9.14□□□□□ -0.95
SEC13-201ENST00000337354 PRR26Q8N8Z3 221 aa9.14□□□□□ -0.95
SEC13-201ENST00000337354 LINC00483Q53H64 154 aa9.13□□□□□ -0.95
SEC13-201ENST00000337354 LINC00575Q6W349 94 aa9.13□□□□□ -0.95
SEC13-201ENST00000337354 ANAPC11Q9NYG5 84 aa9.13□□□□□ -0.95
SEC13-201ENST00000337354 GAGE2AQ6NT46 116 aa9.12□□□□□ -0.95
SEC13-201ENST00000337354 K7ERJ3 54 aa9.12□□□□□ -0.95
SEC13-201ENST00000337354 SNCGO76070 127 aa9.12□□□□□ -0.95
SEC13-201ENST00000337354 A0A087X002 238 aa9.11□□□□□ -0.95
SEC13-201ENST00000337354 hADV29S1A0JD25 119 aa9.11□□□□□ -0.95
SEC13-201ENST00000337354 ST20-AS1Q8NBB2 130 aa9.11□□□□□ -0.95
SEC13-201ENST00000337354 COX6CP09669 75 aa9.1□□□□□ -0.95
SEC13-201ENST00000337354 SPRR1BP22528 89 aa9.1□□□□□ -0.95
SEC13-201ENST00000337354 TYMSOSQ8TAI1 123 aa9.09□□□□□ -0.95
SEC13-201ENST00000337354 TEX49A0A1B0GTD5 131 aa9.08□□□□□ -0.96
SEC13-201ENST00000337354 TSPAN13O95857 204 aa9.08□□□□□ -0.96
SEC13-201ENST00000337354 PSMB2P49721 201 aa9.08□□□□□ -0.96
SEC13-201ENST00000337354 A0A1B0GX51 115 aa9.07□□□□□ -0.96
SEC13-201ENST00000337354 TRIAP1O43715 76 aa9.07□□□□□ -0.96
SEC13-201ENST00000337354 IGLV5-48A0A075B6I7 105 aa9.06□□□□□ -0.96
SEC13-201ENST00000337354 KRTAP13-2Q52LG2 175 aa9.06□□□□□ -0.96
SEC13-201ENST00000337354 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.06□□□□□ -0.96
SEC13-201ENST00000337354 DEFB105AQ8NG35 78 aa9.06□□□□□ -0.96
SEC13-201ENST00000337354 LAMTOR3Q9UHA4 124 aa9.04□□□□□ -0.96
SEC13-201ENST00000337354 LINC01547P58512 204 aaPredicted RBP9.03□□□□□ -0.96
SEC13-201ENST00000337354 Q6ZQY7 126 aa9.03□□□□□ -0.96
SEC13-201ENST00000337354 SSBP3-AS1Q7Z2R9 100 aa9.03□□□□□ -0.96
SEC13-201ENST00000337354 GHRHP01286 108 aa9.02□□□□□ -0.97
SEC13-201ENST00000337354 BATFQ16520 125 aa9.02□□□□□ -0.97
SEC13-201ENST00000337354 OCIAD2Q56VL3 154 aa9.02□□□□□ -0.97
SEC13-201ENST00000337354 C3orf22Q8N5N4 141 aa9.02□□□□□ -0.97
SEC13-201ENST00000337354 SCGB1C2P0DMR2 95 aa9.01□□□□□ -0.97
SEC13-201ENST00000337354 Q8N377 158 aa9.01□□□□□ -0.97
SEC13-201ENST00000337354 PPDPFLQ8WWR9 84 aa9.01□□□□□ -0.97
SEC13-201ENST00000337354 FAM218AQ96MZ4 157 aa9.01□□□□□ -0.97
SEC13-201ENST00000337354 IGLV9-49A0A0B4J1Y8 123 aa8.99□□□□□ -0.97
SEC13-201ENST00000337354 SMIM29Q86T20 159 aa8.99□□□□□ -0.97
SEC13-201ENST00000337354 TNXBP22105 4242 aa8.98□□□□□ -0.97
SEC13-201ENST00000337354 MOBPQ13875 183 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms