RNA–Protein interactions for RNA: ENST00000334841.10

CMC1-201, Transcript of C-X9-C motif containing 1, humanhuman

TSL 3

Gene CMC1, Length 724 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC1-201ENST00000334841 C1orf137Q5JT78 98 aa9.31□□□□□ -0.92
CMC1-201ENST00000334841 NHP2Q9NX24 153 aaKnown RBP9.31□□□□□ -0.92
CMC1-201ENST00000334841 K7ERJ3 54 aa9.3□□□□□ -0.92
CMC1-201ENST00000334841 M0R143 59 aa9.3□□□□□ -0.92
CMC1-201ENST00000334841 SPRR1AP35321 89 aa9.3□□□□□ -0.92
CMC1-201ENST00000334841 A0A1B0GWB2 263 aa9.29□□□□□ -0.92
CMC1-201ENST00000334841 FAM229AH3BQW9 127 aa9.29□□□□□ -0.92
CMC1-201ENST00000334841 BCE1O60756 84 aa9.29□□□□□ -0.92
CMC1-201ENST00000334841 RAB37Q96AX2 223 aa9.29□□□□□ -0.92
CMC1-201ENST00000334841 KRTAP4-16G5E9R7 235 aaPredicted RBP9.28□□□□□ -0.92
CMC1-201ENST00000334841 ZNF73O43830 326 aaPredicted RBP9.28□□□□□ -0.92
CMC1-201ENST00000334841 PLA2G1BP04054 148 aaKnown RBP9.27□□□□□ -0.93
CMC1-201ENST00000334841 SMIM11BQ8TCY0 68 aa9.27□□□□□ -0.93
CMC1-201ENST00000334841 IGLV7-43P04211 117 aa9.26□□□□□ -0.93
CMC1-201ENST00000334841 PRO1854Q9UHT4 67 aa9.26□□□□□ -0.93
CMC1-201ENST00000334841 CBY1Q9Y3M2 126 aa9.26□□□□□ -0.93
CMC1-201ENST00000334841 HERC2O95714 4834 aa9.26□□□□□ -0.93
CMC1-201ENST00000334841 PCP4L1A6NKN8 68 aa9.25□□□□□ -0.93
CMC1-201ENST00000334841 H7C2G1 150 aa9.25□□□□□ -0.93
CMC1-201ENST00000334841 PRLHP81277 87 aa9.25□□□□□ -0.93
CMC1-201ENST00000334841 C6orf99Q4VX62 202 aa9.25□□□□□ -0.93
CMC1-201ENST00000334841 FAM19A1Q7Z5A9 133 aa9.25□□□□□ -0.93
CMC1-201ENST00000334841 KRTAP13-1Q8IUC0 172 aa9.25□□□□□ -0.93
CMC1-201ENST00000334841 DIRC1Q969H9 104 aa9.25□□□□□ -0.93
CMC1-201ENST00000334841 VPS13BQ7Z7G8 4022 aa9.25□□□□□ -0.93
CMC1-201ENST00000334841 ETDCA0A1B0GVM5 59 aa9.23□□□□□ -0.93
CMC1-201ENST00000334841 B5MCH6 92 aa9.23□□□□□ -0.93
CMC1-201ENST00000334841 UBE2AP49459 152 aa9.23□□□□□ -0.93
CMC1-201ENST00000334841 BATFQ16520 125 aa9.23□□□□□ -0.93
CMC1-201ENST00000334841 KRTAP4-5Q9BYR2 181 aa9.22□□□□□ -0.93
CMC1-201ENST00000334841 ZNF861PO60384 105 aa9.21□□□□□ -0.94
CMC1-201ENST00000334841 RPL28P46779 137 aaKnown RBP9.21□□□□□ -0.94
CMC1-201ENST00000334841 Q1RN00 199 aa9.21□□□□□ -0.94
CMC1-201ENST00000334841 Q6ZRX8 168 aa9.21□□□□□ -0.94
CMC1-201ENST00000334841 H0Y9J4 135 aa9.2□□□□□ -0.94
CMC1-201ENST00000334841 TSPAN13O95857 204 aa9.2□□□□□ -0.94
CMC1-201ENST00000334841 ELOF1P60002 83 aaKnown RBP9.2□□□□□ -0.94
CMC1-201ENST00000334841 TRBV7-6A0A0J9YX20 115 aa9.19□□□□□ -0.94
CMC1-201ENST00000334841 COX7BP24311 80 aa9.19□□□□□ -0.94
CMC1-201ENST00000334841 Q9BRP9 147 aa9.19□□□□□ -0.94
CMC1-201ENST00000334841 SNHG12Q9BXW3 62 aa9.19□□□□□ -0.94
CMC1-201ENST00000334841 SMCR5Q8TEV8 140 aa9.17□□□□□ -0.94
CMC1-201ENST00000334841 HIGD2AQ9BW72 106 aa9.17□□□□□ -0.94
CMC1-201ENST00000334841 TRIAP1O43715 76 aa9.16□□□□□ -0.94
CMC1-201ENST00000334841 SPINK6Q6UWN8 80 aa9.16□□□□□ -0.94
CMC1-201ENST00000334841 PKHD1L1Q86WI1 4243 aa9.16□□□□□ -0.94
CMC1-201ENST00000334841 SRRM2Q9UQ35 2752 aaKnown RBP9.15□□□□□ -0.95
CMC1-201ENST00000334841 ERC2-IT1O76042 136 aa9.14□□□□□ -0.95
CMC1-201ENST00000334841 VAMP3Q15836 100 aa9.13□□□□□ -0.95
CMC1-201ENST00000334841 PSMB2P49721 201 aa9.12□□□□□ -0.95
CMC1-201ENST00000334841 NAA38Q9BRA0 125 aaKnown RBP9.12□□□□□ -0.95
CMC1-201ENST00000334841 DHRS4-AS1Q9P1J3 65 aa9.12□□□□□ -0.95
CMC1-201ENST00000334841 LINC00575Q6W349 94 aa9.11□□□□□ -0.95
CMC1-201ENST00000334841 TAX1BP3O14907 124 aa9.1□□□□□ -0.95
CMC1-201ENST00000334841 INAFM2P0DMQ5 153 aa9.1□□□□□ -0.95
CMC1-201ENST00000334841 FAM218AQ96MZ4 157 aa9.1□□□□□ -0.95
CMC1-201ENST00000334841 H0YGX0 51 aa9.08□□□□□ -0.96
CMC1-201ENST00000334841 CLEC2BQ92478 149 aa9.08□□□□□ -0.96
CMC1-201ENST00000334841 KRTAP1-4P0C5Y4 121 aa9.07□□□□□ -0.96
CMC1-201ENST00000334841 COL5A1-AS1Q5SY13 56 aa9.07□□□□□ -0.96
CMC1-201ENST00000334841 ST20-AS1Q8NBB2 130 aa9.07□□□□□ -0.96
CMC1-201ENST00000334841 SPRR4Q96PI1 79 aa9.07□□□□□ -0.96
CMC1-201ENST00000334841 ABCA13Q86UQ4 5058 aa9.06□□□□□ -0.96
CMC1-201ENST00000334841 hADV29S1A0JD25 119 aa9.06□□□□□ -0.96
CMC1-201ENST00000334841 H3BUT2 72 aa9.06□□□□□ -0.96
CMC1-201ENST00000334841 SLC25A20O43772 301 aa9.06□□□□□ -0.96
CMC1-201ENST00000334841 COX6CP09669 75 aa9.06□□□□□ -0.96
CMC1-201ENST00000334841 C9orf118A6NHY6 69 aa9.05□□□□□ -0.96
CMC1-201ENST00000334841 ZNF706Q9Y5V0 76 aaPredicted RBP9.05□□□□□ -0.96
CMC1-201ENST00000334841 SCGB1C2P0DMR2 95 aa9.03□□□□□ -0.96
CMC1-201ENST00000334841 Q6ZQY7 126 aa9.03□□□□□ -0.96
CMC1-201ENST00000334841 ANAPC11Q9NYG5 84 aa9.03□□□□□ -0.96
CMC1-201ENST00000334841 A0A1B0GX51 115 aa9.02□□□□□ -0.97
CMC1-201ENST00000334841 LINC00483Q53H64 154 aa9.02□□□□□ -0.97
CMC1-201ENST00000334841 GAGE2AQ6NT46 116 aa9.02□□□□□ -0.97
CMC1-201ENST00000334841 IGLV5-48A0A075B6I7 105 aa9.01□□□□□ -0.97
CMC1-201ENST00000334841 A0A1W2PPM0 123 aa9.01□□□□□ -0.97
CMC1-201ENST00000334841 LST1O00453 97 aa9.01□□□□□ -0.97
CMC1-201ENST00000334841 LINC01547P58512 204 aaPredicted RBP9.01□□□□□ -0.97
CMC1-201ENST00000334841 TCL1BO95988 128 aa9□□□□□ -0.97
CMC1-201ENST00000334841 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9□□□□□ -0.97
CMC1-201ENST00000334841 A0A087X002 238 aa8.99□□□□□ -0.97
CMC1-201ENST00000334841 SPRR1BP22528 89 aa8.99□□□□□ -0.97
CMC1-201ENST00000334841 LYRM7Q5U5X0 104 aa8.99□□□□□ -0.97
CMC1-201ENST00000334841 DEFB105AQ8NG35 78 aa8.99□□□□□ -0.97
CMC1-201ENST00000334841 FAM229BQ4G0N7 80 aa8.98□□□□□ -0.97
CMC1-201ENST00000334841 SNCGO76070 127 aa8.97□□□□□ -0.97
CMC1-201ENST00000334841 TRACP01848 142 aa8.97□□□□□ -0.97
CMC1-201ENST00000334841 Q8N377 158 aa8.97□□□□□ -0.97
CMC1-201ENST00000334841 PRR26Q8N8Z3 221 aa8.97□□□□□ -0.97
CMC1-201ENST00000334841 LINC01600Q96MT4 127 aa8.97□□□□□ -0.97
CMC1-201ENST00000334841 MYCBP2O75592 4640 aa8.96□□□□□ -0.97
CMC1-201ENST00000334841 TEX49A0A1B0GTD5 131 aa8.96□□□□□ -0.98
CMC1-201ENST00000334841 FABP2P12104 132 aa8.96□□□□□ -0.98
CMC1-201ENST00000334841 ATXN8Q156A1 80 aa8.96□□□□□ -0.98
CMC1-201ENST00000334841 FAT3Q8TDW7 4589 aa8.96□□□□□ -0.98
CMC1-201ENST00000334841 LRP1Q07954 4544 aaKnown RBP8.96□□□□□ -0.98
CMC1-201ENST00000334841 DNAL4O96015 105 aa8.95□□□□□ -0.98
CMC1-201ENST00000334841 KRTAP13-2Q52LG2 175 aa8.95□□□□□ -0.98
CMC1-201ENST00000334841 FLG2Q5D862 2391 aaPredicted RBP8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms