RNA–Protein interactions for RNA: ENST00000329399.6

PDLIM1-201, Transcript of PDZ and LIM domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM1, Length 1,452 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-201ENST00000329399 NKAPP1Q8N9T2 125 aa10.51□□□□□ -0.73
PDLIM1-201ENST00000329399 TRBV7-6A0A0J9YX20 115 aa10.5□□□□□ -0.73
PDLIM1-201ENST00000329399 C9orf129Q5T035 196 aaKnown RBP10.5□□□□□ -0.73
PDLIM1-201ENST00000329399 Q8N1X5 172 aa10.5□□□□□ -0.73
PDLIM1-201ENST00000329399 C9orf163Q8N9P6 203 aa10.5□□□□□ -0.73
PDLIM1-201ENST00000329399 LINC00474Q9P2X8 69 aa10.5□□□□□ -0.73
PDLIM1-201ENST00000329399 SMR3BP02814 79 aaPredicted RBP10.49□□□□□ -0.73
PDLIM1-201ENST00000329399 Q8NDZ9 215 aa10.49□□□□□ -0.73
PDLIM1-201ENST00000329399 PRO0461Q9UI25 63 aa10.49□□□□□ -0.73
PDLIM1-201ENST00000329399 Q6ZSA8 131 aa10.49□□□□□ -0.73
PDLIM1-201ENST00000329399 H3BT86 120 aa10.48□□□□□ -0.73
PDLIM1-201ENST00000329399 TRAV23DV6A0A075B6W5 121 aa10.47□□□□□ -0.73
PDLIM1-201ENST00000329399 GAGE2BQ13066 116 aa10.47□□□□□ -0.73
PDLIM1-201ENST00000329399 CLEC2BQ92478 149 aa10.47□□□□□ -0.73
PDLIM1-201ENST00000329399 C9JAW5 83 aa10.46□□□□□ -0.74
PDLIM1-201ENST00000329399 SLC25A20O43772 301 aa10.46□□□□□ -0.74
PDLIM1-201ENST00000329399 TRBV10-3A0A0K0K1G6 114 aa10.45□□□□□ -0.74
PDLIM1-201ENST00000329399 DNAL4O96015 105 aa10.45□□□□□ -0.74
PDLIM1-201ENST00000329399 H3BQ85 93 aa10.44□□□□□ -0.74
PDLIM1-201ENST00000329399 ANKRD29Q8N6D5 301 aa10.44□□□□□ -0.74
PDLIM1-201ENST00000329399 DIRC1Q969H9 104 aa10.44□□□□□ -0.74
PDLIM1-201ENST00000329399 PANO1I0J062 215 aa10.43□□□□□ -0.74
PDLIM1-201ENST00000329399 C6orf99Q4VX62 202 aa10.43□□□□□ -0.74
PDLIM1-201ENST00000329399 KCNQ1DNQ9H478 68 aa10.43□□□□□ -0.74
PDLIM1-201ENST00000329399 ZNF73O43830 326 aaPredicted RBP10.42□□□□□ -0.74
PDLIM1-201ENST00000329399 GHRHP01286 108 aa10.42□□□□□ -0.74
PDLIM1-201ENST00000329399 MYCBP2O75592 4640 aa10.42□□□□□ -0.74
PDLIM1-201ENST00000329399 SDIM1Q6ZPB5 146 aa10.42□□□□□ -0.74
PDLIM1-201ENST00000329399 SCXQ7RTU7 201 aa10.41□□□□□ -0.74
PDLIM1-201ENST00000329399 FLG2Q5D862 2391 aaPredicted RBP10.4□□□□□ -0.74
PDLIM1-201ENST00000329399 J3QR89 54 aa10.4□□□□□ -0.74
PDLIM1-201ENST00000329399 PRYO14603 147 aa10.4□□□□□ -0.74
PDLIM1-201ENST00000329399 SERTAD4-AS1Q5TG53 156 aa10.4□□□□□ -0.74
PDLIM1-201ENST00000329399 TEN1Q86WV5 123 aa10.4□□□□□ -0.74
PDLIM1-201ENST00000329399 C7orf33Q8WU49 177 aa10.4□□□□□ -0.74
PDLIM1-201ENST00000329399 C22orf24Q9Y442 160 aa10.4□□□□□ -0.74
PDLIM1-201ENST00000329399 A0A096LNI7 61 aa10.39□□□□□ -0.75
PDLIM1-201ENST00000329399 K7ERU9 68 aa10.39□□□□□ -0.75
PDLIM1-201ENST00000329399 SMCPP49901 116 aaPredicted RBP10.39□□□□□ -0.75
PDLIM1-201ENST00000329399 MRPL55Q7Z7F7 128 aaKnown RBP10.39□□□□□ -0.75
PDLIM1-201ENST00000329399 FAM218AQ96MZ4 157 aa10.39□□□□□ -0.75
PDLIM1-201ENST00000329399 LINC00167Q96N53 147 aa10.39□□□□□ -0.75
PDLIM1-201ENST00000329399 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.39□□□□□ -0.75
PDLIM1-201ENST00000329399 COX7BP24311 80 aa10.38□□□□□ -0.75
PDLIM1-201ENST00000329399 Q5VSD8 79 aa10.38□□□□□ -0.75
PDLIM1-201ENST00000329399 LINC00575Q6W349 94 aa10.38□□□□□ -0.75
PDLIM1-201ENST00000329399 CIRBP-AS1Q8TBR5 109 aa10.38□□□□□ -0.75
PDLIM1-201ENST00000329399 IGLV1-50A0A075B6I6 118 aa10.37□□□□□ -0.75
PDLIM1-201ENST00000329399 EPM2AB3EWF7 344 aa10.37□□□□□ -0.75
PDLIM1-201ENST00000329399 INAFM2P0DMQ5 153 aa10.37□□□□□ -0.75
PDLIM1-201ENST00000329399 ELOF1P60002 83 aaKnown RBP10.37□□□□□ -0.75
PDLIM1-201ENST00000329399 ETDBQ3ZM63 59 aa10.37□□□□□ -0.75
PDLIM1-201ENST00000329399 hADV29S1A0JD25 119 aa10.36□□□□□ -0.75
PDLIM1-201ENST00000329399 OCIAD2Q56VL3 154 aa10.36□□□□□ -0.75
PDLIM1-201ENST00000329399 A0A087WYN8 130 aa10.36□□□□□ -0.75
PDLIM1-201ENST00000329399 BAALC-AS2P0C853 105 aa10.36□□□□□ -0.75
PDLIM1-201ENST00000329399 ORMDL1Q9P0S3 153 aa10.36□□□□□ -0.75
PDLIM1-201ENST00000329399 CHTF8P0CG12 524 aa10.35□□□□□ -0.75
PDLIM1-201ENST00000329399 FAM19A5Q7Z5A7 132 aaPredicted RBP10.35□□□□□ -0.75
PDLIM1-201ENST00000329399 MTURNQ8N3F0 131 aa10.35□□□□□ -0.75
PDLIM1-201ENST00000329399 PPDPFLQ8WWR9 84 aa10.35□□□□□ -0.75
PDLIM1-201ENST00000329399 IGKV2-24A0A0C4DH68 120 aa10.34□□□□□ -0.75
PDLIM1-201ENST00000329399 TMEM256-PLSCR3K7ERE1 68 aa10.34□□□□□ -0.75
PDLIM1-201ENST00000329399 SPRR1AP35321 89 aa10.34□□□□□ -0.75
PDLIM1-201ENST00000329399 FAM168BA1KXE4 195 aa10.33□□□□□ -0.76
PDLIM1-201ENST00000329399 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.32□□□□□ -0.76
PDLIM1-201ENST00000329399 KRTAP7-1Q8IUC3 87 aa10.32□□□□□ -0.76
PDLIM1-201ENST00000329399 LINC00528Q8N1L1 170 aa10.31□□□□□ -0.76
PDLIM1-201ENST00000329399 DHRS4-AS1Q9P1J3 65 aa10.31□□□□□ -0.76
PDLIM1-201ENST00000329399 KRTAP10-4P60372 401 aaPredicted RBP10.3□□□□□ -0.76
PDLIM1-201ENST00000329399 ETDCA0A1B0GVM5 59 aa10.29□□□□□ -0.76
PDLIM1-201ENST00000329399 A0A1W2PNN7 141 aa10.29□□□□□ -0.76
PDLIM1-201ENST00000329399 FAM229AH3BQW9 127 aa10.29□□□□□ -0.76
PDLIM1-201ENST00000329399 SPACA4Q8TDM5 124 aa10.29□□□□□ -0.76
PDLIM1-201ENST00000329399 LRP1Q07954 4544 aaKnown RBP10.28□□□□□ -0.76
PDLIM1-201ENST00000329399 KRTAP4-16G5E9R7 235 aaPredicted RBP10.28□□□□□ -0.76
PDLIM1-201ENST00000329399 REG3GQ6UW15 175 aa10.28□□□□□ -0.76
PDLIM1-201ENST00000329399 HERC1Q15751 4861 aa10.28□□□□□ -0.76
PDLIM1-201ENST00000329399 RPL37AP8A6NKH3 93 aa10.27□□□□□ -0.77
PDLIM1-201ENST00000329399 DPH3Q96FX2 82 aa10.27□□□□□ -0.77
PDLIM1-201ENST00000329399 JMJD7-PLA2G4BH0Y9G9 81 aa10.26□□□□□ -0.77
PDLIM1-201ENST00000329399 Q6ZRX8 168 aa10.26□□□□□ -0.77
PDLIM1-201ENST00000329399 B5MCH6 92 aa10.25□□□□□ -0.77
PDLIM1-201ENST00000329399 PKHD1L1Q86WI1 4243 aa10.24□□□□□ -0.77
PDLIM1-201ENST00000329399 C21orf62-AS1Q17RA5 79 aa10.24□□□□□ -0.77
PDLIM1-201ENST00000329399 H0Y9J4 135 aa10.23□□□□□ -0.77
PDLIM1-201ENST00000329399 UBE2BP63146 152 aa10.23□□□□□ -0.77
PDLIM1-201ENST00000329399 Q6ZQY7 126 aa10.23□□□□□ -0.77
PDLIM1-201ENST00000329399 OBSCN-AS1Q96MR7 158 aa10.23□□□□□ -0.77
PDLIM1-201ENST00000329399 TEX49A0A1B0GTD5 131 aa10.22□□□□□ -0.77
PDLIM1-201ENST00000329399 PLAC8Q9NZF1 115 aa10.22□□□□□ -0.77
PDLIM1-201ENST00000329399 DMBT1Q9UGM3 2413 aaPredicted RBP10.21□□□□□ -0.77
PDLIM1-201ENST00000329399 FAT3Q8TDW7 4589 aa10.2□□□□□ -0.78
PDLIM1-201ENST00000329399 PLA2G1BP04054 148 aaKnown RBP10.19□□□□□ -0.78
PDLIM1-201ENST00000329399 ACYP1P07311 99 aa10.18□□□□□ -0.78
PDLIM1-201ENST00000329399 PHF5AQ7RTV0 110 aaKnown RBP10.18□□□□□ -0.78
PDLIM1-201ENST00000329399 FAM240AA0A1B0GVK7 77 aa10.17□□□□□ -0.78
PDLIM1-201ENST00000329399 PDE6GP18545 87 aa10.17□□□□□ -0.78
PDLIM1-201ENST00000329399 FAM19A1Q7Z5A9 133 aa10.16□□□□□ -0.78
PDLIM1-201ENST00000329399 BCE1O60756 84 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms