RNA–Protein interactions for RNA: ENST00000329397.5

PTP4A3-201, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTP4A3, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-201ENST00000329397 VPREB1P12018 145 aa11.51□□□□□ -0.57
PTP4A3-201ENST00000329397 F8P00451 2351 aa11.51□□□□□ -0.57
PTP4A3-201ENST00000329397 TRAV10A0A0B4J240 114 aa11.5□□□□□ -0.57
PTP4A3-201ENST00000329397 FBN1P35555 2871 aaKnown RBP11.5□□□□□ -0.57
PTP4A3-201ENST00000329397 C15orf56Q8N910 161 aa11.5□□□□□ -0.57
PTP4A3-201ENST00000329397 KRTAP26-1Q6PEX3 210 aa11.48□□□□□ -0.57
PTP4A3-201ENST00000329397 BAHCC1Q9P281 2608 aa11.48□□□□□ -0.57
PTP4A3-201ENST00000329397 ELOF1P60002 83 aaKnown RBP11.48□□□□□ -0.57
PTP4A3-201ENST00000329397 ESRGQ1W209 222 aa11.47□□□□□ -0.57
PTP4A3-201ENST00000329397 Q6ZRP5 223 aa11.46□□□□□ -0.57
PTP4A3-201ENST00000329397 IGKV2D-24A0A075B6R9 120 aa11.45□□□□□ -0.58
PTP4A3-201ENST00000329397 Q8N9L7 120 aa11.45□□□□□ -0.58
PTP4A3-201ENST00000329397 KRTAP10-11P60412 298 aa11.44□□□□□ -0.58
PTP4A3-201ENST00000329397 SNURFQ9Y675 71 aa11.44□□□□□ -0.58
PTP4A3-201ENST00000329397 TRBV7-4A0A0J9YYF1 115 aa11.44□□□□□ -0.58
PTP4A3-201ENST00000329397 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.44□□□□□ -0.58
PTP4A3-201ENST00000329397 DEFB105AQ8NG35 78 aa11.43□□□□□ -0.58
PTP4A3-201ENST00000329397 EGFEM1PQ0D2K5 195 aa11.42□□□□□ -0.58
PTP4A3-201ENST00000329397 MRPL55Q7Z7F7 128 aaKnown RBP11.42□□□□□ -0.58
PTP4A3-201ENST00000329397 M0R378 163 aa11.42□□□□□ -0.58
PTP4A3-201ENST00000329397 LINC00528Q8N1L1 170 aa11.41□□□□□ -0.58
PTP4A3-201ENST00000329397 H3BS24 57 aa11.4□□□□□ -0.58
PTP4A3-201ENST00000329397 SERTAD4-AS1Q5TG53 156 aa11.39□□□□□ -0.59
PTP4A3-201ENST00000329397 H7BZZ5 65 aa11.39□□□□□ -0.59
PTP4A3-201ENST00000329397 PRR15Q8IV56 129 aa11.39□□□□□ -0.59
PTP4A3-201ENST00000329397 MPLKIPQ8TAP9 179 aa11.39□□□□□ -0.59
PTP4A3-201ENST00000329397 C3orf84H3BNL1 204 aa11.38□□□□□ -0.59
PTP4A3-201ENST00000329397 RMI2Q96E14 147 aa11.38□□□□□ -0.59
PTP4A3-201ENST00000329397 TM2D3Q9BRN9 247 aa11.38□□□□□ -0.59
PTP4A3-201ENST00000329397 PDE6GP18545 87 aa11.37□□□□□ -0.59
PTP4A3-201ENST00000329397 COL6A5A8TX70 2615 aa11.37□□□□□ -0.59
PTP4A3-201ENST00000329397 TRBV7-6A0A0J9YX20 115 aa11.37□□□□□ -0.59
PTP4A3-201ENST00000329397 TRAV7A0A075B6U4 112 aa11.36□□□□□ -0.59
PTP4A3-201ENST00000329397 RPL37AP8A6NKH3 93 aa11.36□□□□□ -0.59
PTP4A3-201ENST00000329397 CXCL6P80162 114 aa11.35□□□□□ -0.59
PTP4A3-201ENST00000329397 FAM168BA1KXE4 195 aa11.35□□□□□ -0.59
PTP4A3-201ENST00000329397 SYCNQ0VAF6 134 aa11.35□□□□□ -0.59
PTP4A3-201ENST00000329397 DEFB131BA0A096LNP1 70 aa11.34□□□□□ -0.59
PTP4A3-201ENST00000329397 CASC10Q5T4H9 136 aa11.34□□□□□ -0.59
PTP4A3-201ENST00000329397 NBEAL1Q6ZS30 2694 aa11.34□□□□□ -0.59
PTP4A3-201ENST00000329397 RBM12B-AS1Q9P1G2 102 aa11.33□□□□□ -0.59
PTP4A3-201ENST00000329397 BPY2O14599 106 aa11.33□□□□□ -0.6
PTP4A3-201ENST00000329397 C7orf33Q8WU49 177 aa11.33□□□□□ -0.6
PTP4A3-201ENST00000329397 NKAPP1Q8N9T2 125 aa11.33□□□□□ -0.6
PTP4A3-201ENST00000329397 CMYA5Q8N3K9 4069 aa11.32□□□□□ -0.6
PTP4A3-201ENST00000329397 H3BNG1 76 aa11.3□□□□□ -0.6
PTP4A3-201ENST00000329397 H3BQ85 93 aa11.3□□□□□ -0.6
PTP4A3-201ENST00000329397 PRB2P02812 416 aaPredicted RBP11.3□□□□□ -0.6
PTP4A3-201ENST00000329397 LINC01556Q5JQF7 62 aa11.29□□□□□ -0.6
PTP4A3-201ENST00000329397 FAM229BQ4G0N7 80 aa11.29□□□□□ -0.6
PTP4A3-201ENST00000329397 Q8N377 158 aa11.29□□□□□ -0.6
PTP4A3-201ENST00000329397 F8WEM9 126 aa11.28□□□□□ -0.6
PTP4A3-201ENST00000329397 CSMD3Q7Z407 3707 aa11.27□□□□□ -0.61
PTP4A3-201ENST00000329397 LYSTQ99698 3801 aa11.27□□□□□ -0.61
PTP4A3-201ENST00000329397 NREPQ16612 68 aa11.27□□□□□ -0.61
PTP4A3-201ENST00000329397 ST20-AS1Q8NBB2 130 aa11.27□□□□□ -0.61
PTP4A3-201ENST00000329397 KLKP1Q107X0 134 aa11.25□□□□□ -0.61
PTP4A3-201ENST00000329397 KCNQ1DNQ9H478 68 aa11.25□□□□□ -0.61
PTP4A3-201ENST00000329397 IGKV4-1P06312 121 aa11.24□□□□□ -0.61
PTP4A3-201ENST00000329397 Q9BRP9 147 aa11.24□□□□□ -0.61
PTP4A3-201ENST00000329397 KRTAP7-1Q8IUC3 87 aa11.22□□□□□ -0.61
PTP4A3-201ENST00000329397 DNAH10Q8IVF4 4471 aa11.21□□□□□ -0.61
PTP4A3-201ENST00000329397 A0A0G2JQZ4 141 aa11.2□□□□□ -0.62
PTP4A3-201ENST00000329397 A0A1W2PNN7 141 aa11.2□□□□□ -0.62
PTP4A3-201ENST00000329397 BCE1O60756 84 aa11.2□□□□□ -0.62
PTP4A3-201ENST00000329397 ERC2-IT1O76042 136 aa11.2□□□□□ -0.62
PTP4A3-201ENST00000329397 LINC00588Q9Y4M8 146 aa11.2□□□□□ -0.62
PTP4A3-201ENST00000329397 KRTAP24-1Q3LI83 254 aa11.19□□□□□ -0.62
PTP4A3-201ENST00000329397 Q6ZRX8 168 aa11.19□□□□□ -0.62
PTP4A3-201ENST00000329397 SRRM2Q9UQ35 2752 aaKnown RBP11.19□□□□□ -0.62
PTP4A3-201ENST00000329397 DNAH10OSP0CZ25 163 aa11.18□□□□□ -0.62
PTP4A3-201ENST00000329397 A0A1W2PNM2 257 aa11.18□□□□□ -0.62
PTP4A3-201ENST00000329397 ETDCA0A1B0GVM5 59 aa11.17□□□□□ -0.62
PTP4A3-201ENST00000329397 TMEM254Q8TBM7 123 aa11.17□□□□□ -0.62
PTP4A3-201ENST00000329397 DNAH1Q9P2D7 4330 aa11.16□□□□□ -0.62
PTP4A3-201ENST00000329397 MGAM2Q2M2H8 2515 aa11.16□□□□□ -0.62
PTP4A3-201ENST00000329397 IGLV1-50A0A075B6I6 118 aa11.16□□□□□ -0.62
PTP4A3-201ENST00000329397 STAB2Q8WWQ8 2551 aa11.15□□□□□ -0.62
PTP4A3-201ENST00000329397 KRTAP4-16G5E9R7 235 aaPredicted RBP11.15□□□□□ -0.62
PTP4A3-201ENST00000329397 IGLV5-48A0A075B6I7 105 aa11.15□□□□□ -0.63
PTP4A3-201ENST00000329397 C1orf137Q5JT78 98 aa11.14□□□□□ -0.63
PTP4A3-201ENST00000329397 UBE2BP63146 152 aa11.14□□□□□ -0.63
PTP4A3-201ENST00000329397 TENM2Q9NT68 2774 aa11.13□□□□□ -0.63
PTP4A3-201ENST00000329397 OCR1Q9BZK8 76 aa11.13□□□□□ -0.63
PTP4A3-201ENST00000329397 FUSP35637 526 aaKnown RBP eCLIP11.12□□□□□ -0.639e-7■■■□□ 16.4
PTP4A3-201ENST00000329397 FAM30AQ9NZY2 134 aa11.12□□□□□ -0.63
PTP4A3-201ENST00000329397 DNAH3Q8TD57 4116 aa11.12□□□□□ -0.63
PTP4A3-201ENST00000329397 SMIM29Q86T20 159 aa11.12□□□□□ -0.63
PTP4A3-201ENST00000329397 DHRS4-AS1Q9P1J3 65 aa11.11□□□□□ -0.63
PTP4A3-201ENST00000329397 HUWE1Q7Z6Z7 4374 aaKnown RBP11.11□□□□□ -0.63
PTP4A3-201ENST00000329397 HIGD2AQ9BW72 106 aa11.11□□□□□ -0.63
PTP4A3-201ENST00000329397 TLX1NBP0CAT3 122 aa11.1□□□□□ -0.63
PTP4A3-201ENST00000329397 KTN1-AS1Q86SY8 53 aa11.1□□□□□ -0.63
PTP4A3-201ENST00000329397 C8orf87E5RJ46 101 aa11.09□□□□□ -0.63
PTP4A3-201ENST00000329397 IGKV2-24A0A0C4DH68 120 aa11.09□□□□□ -0.63
PTP4A3-201ENST00000329397 PRYO14603 147 aa11.09□□□□□ -0.63
PTP4A3-201ENST00000329397 TNP2Q05952 138 aa11.09□□□□□ -0.63
PTP4A3-201ENST00000329397 SPRR1AP35321 89 aa11.08□□□□□ -0.64
PTP4A3-201ENST00000329397 DEFB116Q30KQ4 102 aa11.07□□□□□ -0.64
PTP4A3-201ENST00000329397 COL7A1Q02388 2944 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms