RNA–Protein interactions for RNA: ENST00000323441.10

HIF1A-201, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,555 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-201ENST00000323441 TOMM6Q96B49 74 aa1.37□□□□□ -2.19
HIF1A-201ENST00000323441 A8MWP4 228 aa1.37□□□□□ -2.19
HIF1A-201ENST00000323441 SPRR1BP22528 89 aa1.37□□□□□ -2.19
HIF1A-201ENST00000323441 RAB5BP61020 215 aa1.37□□□□□ -2.19
HIF1A-201ENST00000323441 ZC2HC1BQ5TFG8 222 aa1.37□□□□□ -2.19
HIF1A-201ENST00000323441 GAGE2AQ6NT46 116 aa1.37□□□□□ -2.19
HIF1A-201ENST00000323441 TMEM136Q6ZRR5 245 aa1.37□□□□□ -2.19
HIF1A-201ENST00000323441 PRELID3AQ96N28 172 aa1.37□□□□□ -2.19
HIF1A-201ENST00000323441 MAP1LC3AQ9H492 121 aa1.37□□□□□ -2.19
HIF1A-201ENST00000323441 ETDCA0A1B0GVM5 59 aa1.36□□□□□ -2.19
HIF1A-201ENST00000323441 H3BRM9 83 aa1.36□□□□□ -2.19
HIF1A-201ENST00000323441 HRES1P13985 223 aa1.36□□□□□ -2.19
HIF1A-201ENST00000323441 MT3P25713 68 aa1.36□□□□□ -2.19
HIF1A-201ENST00000323441 ERASQ7Z444 233 aa1.36□□□□□ -2.19
HIF1A-201ENST00000323441 SMIM7Q9BQ49 75 aa1.36□□□□□ -2.19
HIF1A-201ENST00000323441 NXT2Q9NPJ8 142 aaKnown RBP1.36□□□□□ -2.19
HIF1A-201ENST00000323441 RAB14P61106 215 aa1.36□□□□□ -2.19
HIF1A-201ENST00000323441 S100A12P80511 92 aa1.36□□□□□ -2.19
HIF1A-201ENST00000323441 C10orf91Q5T1B1 145 aa1.36□□□□□ -2.19
HIF1A-201ENST00000323441 SLC25A34Q6PIV7 304 aa1.36□□□□□ -2.19
HIF1A-201ENST00000323441 Q6ZRX8 168 aa1.36□□□□□ -2.19
HIF1A-201ENST00000323441 LINC01546A6NGU7 62 aa1.36□□□□□ -2.19
HIF1A-201ENST00000323441 KRTAP5-8O75690 187 aa1.36□□□□□ -2.19
HIF1A-201ENST00000323441 PFN2P35080 140 aa1.36□□□□□ -2.19
HIF1A-201ENST00000323441 Q9BRP9 147 aa1.36□□□□□ -2.19
HIF1A-201ENST00000323441 LOC107984156A0A0G2JMH3 177 aa1.35□□□□□ -2.19
HIF1A-201ENST00000323441 A0A0G2JQZ4 141 aa1.35□□□□□ -2.19
HIF1A-201ENST00000323441 ERC2-IT1O76042 136 aa1.35□□□□□ -2.19
HIF1A-201ENST00000323441 JOSD1Q15040 202 aaPredicted RBP1.35□□□□□ -2.19
HIF1A-201ENST00000323441 C9orf153Q5TBE3 101 aa1.35□□□□□ -2.19
HIF1A-201ENST00000323441 C1orf195Q5TG92 126 aa1.35□□□□□ -2.19
HIF1A-201ENST00000323441 SLC51BQ86UW2 128 aa1.35□□□□□ -2.19
HIF1A-201ENST00000323441 ARL17AQ8IVW1 177 aa1.35□□□□□ -2.19
HIF1A-201ENST00000323441 CST9LQ9H4G1 147 aa1.35□□□□□ -2.19
HIF1A-201ENST00000323441 TRBV10-2A0A0K0K1G8 114 aa1.35□□□□□ -2.19
HIF1A-201ENST00000323441 SPINK8P0C7L1 97 aa1.35□□□□□ -2.19
HIF1A-201ENST00000323441 IGLC3P0DOY3 106 aa1.35□□□□□ -2.19
HIF1A-201ENST00000323441 RPL23P62829 140 aaKnown RBP1.35□□□□□ -2.19
HIF1A-201ENST00000323441 RGS21Q2M5E4 152 aa1.35□□□□□ -2.19
HIF1A-201ENST00000323441 ZNF625Q96I27 306 aaPredicted RBP1.35□□□□□ -2.19
HIF1A-201ENST00000323441 LOC389332A0A1B0GUA5 103 aa1.34□□□□□ -2.19
HIF1A-201ENST00000323441 PMVKQ15126 192 aa1.34□□□□□ -2.19
HIF1A-201ENST00000323441 SMLR1H3BR10 107 aa1.34□□□□□ -2.19
HIF1A-201ENST00000323441 SRP19P09132 144 aaKnown RBP1.34□□□□□ -2.19
HIF1A-201ENST00000323441 NDUFA5Q16718 116 aa1.34□□□□□ -2.19
HIF1A-201ENST00000323441 TRBV10-3A0A0K0K1G6 114 aa1.34□□□□□ -2.2
HIF1A-201ENST00000323441 LINC00587B1AMM8 73 aa1.34□□□□□ -2.2
HIF1A-201ENST00000323441 SNAPINO95295 136 aa1.34□□□□□ -2.2
HIF1A-201ENST00000323441 Q1RN00 199 aa1.34□□□□□ -2.2
HIF1A-201ENST00000323441 ATP11AUNQ6ZP68 121 aa1.34□□□□□ -2.2
HIF1A-201ENST00000323441 SMIM29Q86T20 159 aa1.34□□□□□ -2.2
HIF1A-201ENST00000323441 SCGB3A1Q96QR1 104 aa1.34□□□□□ -2.2
HIF1A-201ENST00000323441 NAT8Q9UHE5 227 aa1.34□□□□□ -2.2
HIF1A-201ENST00000323441 S100A6P06703 90 aa1.33□□□□□ -2.2
HIF1A-201ENST00000323441 MRPL54Q6P161 138 aaKnown RBP1.33□□□□□ -2.2
HIF1A-201ENST00000323441 SPRR2GQ9BYE4 73 aa1.33□□□□□ -2.2
HIF1A-201ENST00000323441 TRBV20-1A0A075B6N2 111 aa1.33□□□□□ -2.2
HIF1A-201ENST00000323441 A8MUU9 505 aa1.33□□□□□ -2.2
HIF1A-201ENST00000323441 ZNF22P17026 224 aaPredicted RBP1.33□□□□□ -2.2
HIF1A-201ENST00000323441 PRO1933Q9H354 126 aa1.33□□□□□ -2.2
HIF1A-201ENST00000323441 CBY1Q9Y3M2 126 aa1.33□□□□□ -2.2
HIF1A-201ENST00000323441 AHNAKQ09666 5890 aaKnown RBP1.33□□□□□ -2.2
HIF1A-201ENST00000323441 BOD1L2Q8IYS8 172 aa1.33□□□□□ -2.2
HIF1A-201ENST00000323441 LAMTOR3Q9UHA4 124 aa1.33□□□□□ -2.2
HIF1A-201ENST00000323441 H7C2G1 150 aa1.32□□□□□ -2.2
HIF1A-201ENST00000323441 ATP6V1G1O75348 118 aa1.32□□□□□ -2.2
HIF1A-201ENST00000323441 NDUFC2O95298 119 aa1.32□□□□□ -2.2
HIF1A-201ENST00000323441 ADCYAP1P18509 176 aa1.32□□□□□ -2.2
HIF1A-201ENST00000323441 DDTP30046 118 aa1.32□□□□□ -2.2
HIF1A-201ENST00000323441 LINC00158P58513 81 aa1.32□□□□□ -2.2
HIF1A-201ENST00000323441 KRTAP12-2P59991 146 aa1.32□□□□□ -2.2
HIF1A-201ENST00000323441 HERV-K104P63124 156 aa1.32□□□□□ -2.2
HIF1A-201ENST00000323441 KRTAP16-1A8MUX0 517 aa1.32□□□□□ -2.2
HIF1A-201ENST00000323441 NCR3O14931 201 aa1.32□□□□□ -2.2
HIF1A-201ENST00000323441 ADIRFQ15847 76 aa1.32□□□□□ -2.2
HIF1A-201ENST00000323441 SPANXB1Q9NS25 103 aaPredicted RBP1.32□□□□□ -2.2
HIF1A-201ENST00000323441 TCL1BO95988 128 aa1.32□□□□□ -2.2
HIF1A-201ENST00000323441 IFITM2Q01629 132 aa1.32□□□□□ -2.2
HIF1A-201ENST00000323441 NOTCH2NLQ7Z3S9 236 aa1.32□□□□□ -2.2
HIF1A-201ENST00000323441 TCTE3Q8IZS6 198 aa1.32□□□□□ -2.2
HIF1A-201ENST00000323441 DHRS4-AS1Q9P1J3 65 aa1.32□□□□□ -2.2
HIF1A-201ENST00000323441 Q5VV11 94 aa1.31□□□□□ -2.2
HIF1A-201ENST00000323441 MAP1LC3CQ9BXW4 147 aa1.31□□□□□ -2.2
HIF1A-201ENST00000323441 TRAV23DV6A0A075B6W5 121 aa1.31□□□□□ -2.2
HIF1A-201ENST00000323441 ZNF73O43830 326 aaPredicted RBP1.31□□□□□ -2.2
HIF1A-201ENST00000323441 AKR1D1P51857 326 aa1.31□□□□□ -2.2
HIF1A-201ENST00000323441 HRCT1Q6UXD1 115 aa1.31□□□□□ -2.2
HIF1A-201ENST00000323441 MIR7-3HGQ8N6C7 128 aa1.31□□□□□ -2.2
HIF1A-201ENST00000323441 ST20-AS1Q8NBB2 130 aa1.31□□□□□ -2.2
HIF1A-201ENST00000323441 SMIM13P0DJ93 91 aa1.31□□□□□ -2.2
HIF1A-201ENST00000323441 NDUFA6P56556 154 aa1.31□□□□□ -2.2
HIF1A-201ENST00000323441 Q6ZVH6 145 aa1.31□□□□□ -2.2
HIF1A-201ENST00000323441 TMEM223A0PJW6 202 aa1.3□□□□□ -2.2
HIF1A-201ENST00000323441 HINT1P49773 126 aaPredicted RBP1.3□□□□□ -2.2
HIF1A-201ENST00000323441 TEX49A0A1B0GTD5 131 aa1.3□□□□□ -2.2
HIF1A-201ENST00000323441 C11orf86A6NJI1 115 aa1.3□□□□□ -2.2
HIF1A-201ENST00000323441 KRTAP8-1Q8IUC2 63 aa1.3□□□□□ -2.2
HIF1A-201ENST00000323441 LINC00518Q8N0U6 118 aa1.3□□□□□ -2.2
HIF1A-201ENST00000323441 IGLV5-48A0A075B6I7 105 aa1.29□□□□□ -2.2
HIF1A-201ENST00000323441 PEA15Q15121 130 aa1.29□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 126.3 ms